FFCP PHASE1:Hg19::chr4:103713093..103713096,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:103713093..103713096,- | |||
|coexpression_cluster_id=C306 | |coexpression_cluster_id=C306 | ||
|description=CAGE_peak_at_chr4:103713093..103713096,- | |description=CAGE_peak_at_chr4:103713093..103713096,- | ||
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|ontology_enrichment_celltype=CL:0002087!1.06e-14!119;CL:0002031!1.32e-13!124;CL:0000037!1.13e-12!172;CL:0000566!1.13e-12!172;CL:0000738!1.41e-12!140;CL:0002032!3.67e-12!165;CL:0000837!3.67e-12!165;CL:0000988!1.07e-11!182;CL:0000542!2.27e-09!53;CL:0000051!2.27e-09!53;CL:0000838!4.43e-09!52;CL:0002057!3.68e-07!42 | |ontology_enrichment_celltype=CL:0002087!1.06e-14!119;CL:0002031!1.32e-13!124;CL:0000037!1.13e-12!172;CL:0000566!1.13e-12!172;CL:0000738!1.41e-12!140;CL:0002032!3.67e-12!165;CL:0000837!3.67e-12!165;CL:0000988!1.07e-11!182;CL:0000542!2.27e-09!53;CL:0000051!2.27e-09!53;CL:0000838!4.43e-09!52;CL:0002057!3.68e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.70e-08;33!CL:0002057;1.70e-08;33 | |ontology_enrichment_celltype_v019=CL:0000860;1.70e-08;33!CL:0002057;1.70e-08;33 | ||
|ontology_enrichment_celltype_v019_2=CL:0002087,1.83e-15,115;CL:0000037,5.02e-13,168;CL:0000988,5.71e-13,177;CL:0000738,6.11e-13,136;CL:0002031,2.05e-12,120;CL:0002032,2.67e-12,161;CL:0000837,2.67e-12,161;CL:0000542,2.34e-09,53;CL:0000051,2.34e-09,53;CL:0000838,5.26e-09,52;CL:0000860,1.57e-08,42;CL:0002057,1.57e-08,42 | |||
|ontology_enrichment_development_v019=CL:0002057;4.89e-07;42 | |ontology_enrichment_development_v019=CL:0002057;4.89e-07;42 | ||
|ontology_enrichment_disease=DOID:162!3.49e-15!235;DOID:14566!3.25e-14!239;DOID:0050687!5.91e-10!143;DOID:0050686!2.47e-09!137 | |ontology_enrichment_disease=DOID:162!3.49e-15!235;DOID:14566!3.25e-14!239;DOID:0050687!5.91e-10!143;DOID:0050686!2.47e-09!137 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:162,4.13e-10,235;DOID:14566,1.53e-09,239;DOID:0050687,2.61e-07,143;DOID:0050686,9.62e-07,137 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p@chr4:103713093..103713096,- | |short_description=p@chr4:103713093..103713096,- | ||
}} | }} |
Latest revision as of 00:32, 30 July 2015
Short description: | p@chr4:103713093..103713096, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:103713093..103713096, - |
Coexpression cluster: | C306_CD4_CD8_Neutrophils_Natural_CD19_CD14_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 1.83e-15 | 115 |
hematopoietic stem cell | 5.02e-13 | 168 |
hematopoietic cell | 5.71e-13 | 177 |
leukocyte | 6.11e-13 | 136 |
hematopoietic lineage restricted progenitor cell | 2.05e-12 | 120 |
hematopoietic oligopotent progenitor cell | 2.67e-12 | 161 |
hematopoietic multipotent progenitor cell | 2.67e-12 | 161 |
lymphocyte | 2.34e-09 | 53 |
common lymphoid progenitor | 2.34e-09 | 53 |
lymphoid lineage restricted progenitor cell | 5.26e-09 | 52 |
classical monocyte | 1.57e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.57e-08 | 42 |
Ontology term | p-value | n |
---|---|---|
cancer | 4.13e-10 | 235 |
disease of cellular proliferation | 1.53e-09 | 239 |
cell type cancer | 2.61e-07 | 143 |
organ system cancer | 9.62e-07 | 137 |