FFCP PHASE1:Hg19::chr12:107487338..107487358,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1407 | |EntrezGene=1407 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2384 | |HGNC=2384 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-47bp_to_ENST00000550633_5end | |association_with_transcript=-47bp_to_ENST00000550633_5end | ||
|cluster_id=chr12:107487338..107487358,- | |||
|description=CAGE_peak_2_at_CRY1_5end | |description=CAGE_peak_2_at_CRY1_5end | ||
|id=chr12:107487338..107487358,- | |id=chr12:107487338..107487358,- | ||
|ontology_enrichment_celltype=CL:0000791!6.65e-11!18;CL:0000789!6.65e-11!18;CL:0002420!6.65e-11!18;CL:0002419!6.65e-11!18;CL:0000790!6.65e-11!18;CL:0000084!1.90e-10!25;CL:0000827!1.90e-10!25;CL:0000037!1.81e-08!172;CL:0000566!1.81e-08!172;CL:0000738!2.17e-08!140;CL:0000625!1.10e-07!11;CL:0000988!3.41e-07!182 | |ontology_enrichment_celltype=CL:0000791!6.65e-11!18;CL:0000789!6.65e-11!18;CL:0002420!6.65e-11!18;CL:0002419!6.65e-11!18;CL:0000790!6.65e-11!18;CL:0000084!1.90e-10!25;CL:0000827!1.90e-10!25;CL:0000037!1.81e-08!172;CL:0000566!1.81e-08!172;CL:0000738!2.17e-08!140;CL:0000625!1.10e-07!11;CL:0000988!3.41e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000791;2.10e-11;18!CL:0000789;2.10e-11;18!CL:0002419;2.10e-11;18!CL:0000084;1.38e-10;25!CL:0000625;8.90e-08;11 | |ontology_enrichment_celltype_v019=CL:0000791;2.10e-11;18!CL:0000789;2.10e-11;18!CL:0002419;2.10e-11;18!CL:0000084;1.38e-10;25!CL:0000625;8.90e-08;11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,6.17e-11,18;CL:0000789,6.17e-11,18;CL:0002420,6.17e-11,18;CL:0002419,6.17e-11,18;CL:0000790,6.17e-11,18;CL:0000084,2.50e-10,25;CL:0000827,2.50e-10,25;CL:0000037,1.31e-08,168;CL:0000738,1.63e-08,136;CL:0000625,1.04e-07,11;CL:0000988,1.54e-07,177;CL:0002032,7.96e-07,161;CL:0000837,7.96e-07,161 | |||
|ontology_enrichment_development_v019=CL:0000790;2.10e-11;18 | |ontology_enrichment_development_v019=CL:0000790;2.10e-11;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.94e-19!115;UBERON:0002616!1.02e-08!59;UBERON:0001049!1.40e-08!57;UBERON:0005068!1.40e-08!57;UBERON:0006241!1.40e-08!57;UBERON:0007135!1.40e-08!57;UBERON:0001017!1.59e-08!82;UBERON:0000073!3.36e-08!94;UBERON:0001016!3.36e-08!94;UBERON:0005743!7.95e-08!86;UBERON:0002020!1.25e-07!34;UBERON:0003528!1.25e-07!34;UBERON:0001893!1.45e-07!34;UBERON:0003080!1.55e-07!42;UBERON:0002791!1.78e-07!33;UBERON:0002780!2.27e-07!41;UBERON:0001890!2.27e-07!41;UBERON:0006240!2.27e-07!41;UBERON:0000955!3.57e-07!69;UBERON:0006238!3.57e-07!69;UBERON:0001869!7.69e-07!32 | |ontology_enrichment_uberon=UBERON:0007023!2.94e-19!115;UBERON:0002616!1.02e-08!59;UBERON:0001049!1.40e-08!57;UBERON:0005068!1.40e-08!57;UBERON:0006241!1.40e-08!57;UBERON:0007135!1.40e-08!57;UBERON:0001017!1.59e-08!82;UBERON:0000073!3.36e-08!94;UBERON:0001016!3.36e-08!94;UBERON:0005743!7.95e-08!86;UBERON:0002020!1.25e-07!34;UBERON:0003528!1.25e-07!34;UBERON:0001893!1.45e-07!34;UBERON:0003080!1.55e-07!42;UBERON:0002791!1.78e-07!33;UBERON:0002780!2.27e-07!41;UBERON:0001890!2.27e-07!41;UBERON:0006240!2.27e-07!41;UBERON:0000955!3.57e-07!69;UBERON:0006238!3.57e-07!69;UBERON:0001869!7.69e-07!32 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.38e-19,114;UBERON:0001016,1.07e-08,89;UBERON:0000073,1.32e-08,53;UBERON:0002616,1.32e-08,53;UBERON:0001049,1.89e-08,56;UBERON:0005068,1.89e-08,56;UBERON:0006241,1.89e-08,56;UBERON:0007135,1.89e-08,56;UBERON:0001017,2.42e-08,81;UBERON:0003528,1.19e-07,34;UBERON:0002020,1.19e-07,34;UBERON:0001893,1.38e-07,34;UBERON:0002780,2.11e-07,41;UBERON:0001890,2.11e-07,41;UBERON:0003080,2.11e-07,41;UBERON:0006240,2.11e-07,41;UBERON:0002791,3.63e-07,32;UBERON:0000955,5.43e-07,68;UBERON:0006238,5.43e-07,68;UBERON:0001869,7.36e-07,32 | |||
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| ||
|short_description=p2@CRY1 | |short_description=p2@CRY1 | ||
}} | }} |
Latest revision as of 03:27, 16 September 2015
Short description: | p2@CRY1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CRY1_5end |
Coexpression cluster: | NA |
Association with transcript: | -47bp_to_ENST00000550633_5end |
EntrezGene: | CRY1 |
HGNC: | 2384 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 6.17e-11 | 18 |
alpha-beta T cell | 6.17e-11 | 18 |
immature T cell | 6.17e-11 | 18 |
mature T cell | 6.17e-11 | 18 |
immature alpha-beta T cell | 6.17e-11 | 18 |
T cell | 2.50e-10 | 25 |
pro-T cell | 2.50e-10 | 25 |
hematopoietic stem cell | 1.31e-08 | 168 |
leukocyte | 1.63e-08 | 136 |
CD8-positive, alpha-beta T cell | 1.04e-07 | 11 |
hematopoietic cell | 1.54e-07 | 177 |
hematopoietic oligopotent progenitor cell | 7.96e-07 | 161 |
hematopoietic multipotent progenitor cell | 7.96e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.38e-19 | 114 |
nervous system | 1.07e-08 | 89 |
regional part of nervous system | 1.32e-08 | 53 |
regional part of brain | 1.32e-08 | 53 |
neural tube | 1.89e-08 | 56 |
neural rod | 1.89e-08 | 56 |
future spinal cord | 1.89e-08 | 56 |
neural keel | 1.89e-08 | 56 |
central nervous system | 2.42e-08 | 81 |
brain grey matter | 1.19e-07 | 34 |
gray matter | 1.19e-07 | 34 |
telencephalon | 1.38e-07 | 34 |
regional part of forebrain | 2.11e-07 | 41 |
forebrain | 2.11e-07 | 41 |
anterior neural tube | 2.11e-07 | 41 |
future forebrain | 2.11e-07 | 41 |
regional part of telencephalon | 3.63e-07 | 32 |
brain | 5.43e-07 | 68 |
future brain | 5.43e-07 | 68 |
cerebral hemisphere | 7.36e-07 | 32 |