FFCP PHASE1:Mm9::chr5:67844705..67844708,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=245 | |MCL_coexpression_id=245 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:67844705..67844708,+ | |||
|description=CAGE_peak_at_chr5:67844705..67844708,+ | |description=CAGE_peak_at_chr5:67844705..67844708,+ | ||
|id=chr5:67844705..67844708,+ | |id=chr5:67844705..67844708,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.17e-17,7;CL:0000680,3.23e-15,6;CL:0000187,3.23e-15,6;CL:0000056,3.23e-15,6;CL:0000355,6.11e-10,9;CL:0002494,1.05e-08,3;CL:0000737,1.05e-08,3;CL:0000746,1.05e-08,3;CL:0000513,1.05e-08,3;CL:0000723,1.99e-08,91;CL:0000048,1.99e-08,91;CL:0000192,3.90e-08,3;CL:0000359,3.90e-08,3;CL:0002539,3.90e-08,3;CL:0000514,3.90e-08,3;CL:0000034,1.26e-07,97 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,6.11e-10,9;UBERON:0002036,6.11e-10,9;UBERON:0002385,6.11e-10,9;UBERON:0000486,6.11e-10,9;UBERON:0007503,6.11e-10,9;UBERON:0001015,6.11e-10,9;UBERON:0002329,6.11e-10,9;UBERON:0003082,6.11e-10,9;UBERON:0003059,6.11e-10,9;UBERON:0007282,6.11e-10,9;UBERON:0004290,6.11e-10,9;UBERON:0009618,6.11e-10,9;UBERON:0000383,6.97e-09,10;UBERON:0000055,2.94e-08,5;UBERON:0007500,2.94e-08,5;UBERON:0001981,2.94e-08,5;UBERON:0002049,2.94e-08,5;UBERON:0007798,2.94e-08,5;UBERON:0004537,2.94e-08,5;UBERON:0006965,2.94e-08,5;UBERON:0001135,3.90e-08,3;UBERON:0004237,3.90e-08,3;UBERON:0004695,3.90e-08,3;UBERON:0002111,3.90e-08,3;UBERON:0004178,3.90e-08,3;UBERON:0007524,5.11e-08,11;UBERON:0003077,5.11e-08,11;UBERON:0007285,5.11e-08,11 | |||
|phase1_expression=0.320297694209588,0,0,0.30246421130683,0,0.16787927191189,0.467225281191051,0.645616617207881,0.84473233291,0.468129052643987,1.71217968225505,1.11681022593471,1.19840510951844,0.0874204024189974,0.999329285446988,0,0,0.315462165358238,1.23402990245165,1.27316895539409,0,0.397163804803541,1.04479915655574,0.639969691173627,0.22940928106717,0,0,0.430942465371778,0.760093677825496,0,0,0,0.61506478758457,0,0,0.166234645358492,0.204169356262369,0,0.7813353445238,0,0,0,0,1.1330713617802,1.11514624341466,1.28482726513177,0,0.436050312760893,0.659058548203415,0.194429899074283,1.39986421625363,1.43752564364972,0.838913030288682,0,0.336093799142464,1.02903774414379,2.57880095944881,1.54701627683233,0.404632921719196,1.05798195854407,0,2.03306719241479,0.889294796111139,0.449949858640699,0,0.7104801149461,0.898800331555214,0.384218305321555,0.414758449233911,0.675029691658453,0.420649922702764,0.571301968807607,0.220868540951614,0.61245399607477,0.479227355091182,0.919218786610021,2.20231761998777,0.255374676170375,0.46081959976873,0.263772575460388,0.365950574409639,2.08365348222704,1.3959149950069,0.56276261003168,0.45839474333043,0.883885756421003,0,0.186399445825301,0.227178579999552,0.226714680320357,1.15945795480671,0,0,0.539703191637817,0,0.448026887097336,0.421333260395256,0.681721290312231,3.11743205523443,0.70667914902068,0.14084341977668,0,0,0,0.649473123033642,1.26679932737549,0.505524445014783,0.22836775943812,0,0.29688427812965,0,1.52232739156071,0.230615497256059,0.150722640552623,0.587943535678524,0,0,0.144599356919912,18.5768215909474,0.323533699894818,0.220841518460394,0,13.0474232852686,0,0,0.766371165625774,0,0,0,0.299581278809645,0.457500602818626,0.125654352112864,0.173824320192276,0,0.62336413367868,0,0.101839363850316,0.124406970610093,0.505445516867349,0.420883711772948,0,0.229902104433473,0.180062129805349,0.452114453507145,0,0,0,0,0.646703978798527,0.189106080167819,0.175951124163949,0.219195732427575,1.66828349535359,0.348252166522167,0.411564272815887,0.199034266818493,0,0.257347907114715,0.284163499395593,0,0.469052119962192,0.180062061461015,0.23674473558521,0.393528463494808,0.462801338662135,0,0.268273401399619,0.116765342367169,0.16455984991348,0.164167464079095,0.0810688095458557,0.146199987425332,0.219550115291051,0,0.841159794256509,0.514523061896422,0,0.264450566663544,0.426576501070468,0.464473343720877,0.257734922644187,0.201683524623343,0,0.380451252225118,0,0,0,0,0,0,0.216138049874694,0.398282546508734,0.569003702859245,0.228497025219458,1.1270773567308,0.610953983535943,0.387904974335251,0,0.0632365371242573,0.295220295959204,0.470996183524124,0.246794327843601,0,0,0.196558995113203,0.224862112384854,0.405720242777006,0.241177159752417,0,0.287696137450811,0.486405680325106,0.274561413188081,0,0,0.312037673114561,0.252578877947112,0,0,0,0.37898282354097,0.488894929326078,0.169745085775188,0.234690248288502,0.335012514883631,0.476087281772027,0.195133647857799,0.157635144106191,0,0.159454768657487,0.327726629431476,0,0.433947175744535,0,2.17562273527484,0,0,0.321101179975584,0.468846746368813,0.819674726883377,0.504941854408746,0,2.34263246577983,0.646270193198397,0,0,0,0.809621403349789,0.292255857911312,0.790575555893047,0,0,0.890328018336276,0,0.164970122972535,0,0.242780636154981,0.302323556964751,0.377210159511796,0.295301892880773,0.307435147943927,0,0.363533729477506,0.356497378384721,0.948110273807448,1.05418608574999,0,0.340439605753788,0.36012218806262,0.517434735131018,0.214337035031592,0.354680467284547,0,0.164549020602121,0.304464949114599,0.23467170806371,0.42366414172764,0.882113592219848,0.16488625294148,0.322928853391811,0.180938774784468,0.238744688006273,0,0.582961673259701,0.18542530201051,0.341741761595705,0.206386867963223,0,0,0,0.457556346413045,0.169978429993855,0.139951452323658,0,0.954670618015114,0.474503990371703,0.406638934253697,0.540026704109006,0.627264888043406,0,0.134864346384821,0.0826534557253359,0.26175594198403,0.129614973291793,0,1.69107881605257,0,0.165458490457098,0.388902376688095,1.16243841129958,0.337912250981556,0.352071715937262,0.13020438484395,0.104859344425711,0.241584120826006,0.576060012515731,0,1.01362607645082,0.616265742988964,0.389762468933385,0.179026695667481,0,0.120195449519969,0,0.201932899896295,0.0762068066549998,0,0.38983152295901,0,0,0.680191150845634,0.443971906748129,0.62799699626633,0.335769232728157,0.386379188064381,0.187682475451182,0.183151624267265,0.214368379079066,0,0,0,0,0.171853182343688,0.685082519770642,0,0.675022500231806,0,0.906284817968409,0,0.518936737920883,0,0.682934423016537,0.486213434136588,0,0.551530525350042,0.44449345560323,0.618105171716683,0.320919209591815,0,0,0.188626341386076,0.187283014939765,0,0.287177344778066,0.476293691283074,0,0.38581844092741,7.82963211526283,0.294397840268795,0.685738504770831,0.177475806159338,0.238436189947321,0.145346416632329,0.188218760830661,0.338458431566706,0.182927972872773,0,0.135804113845862,0.561142271657738,0.593175090620871,0.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| |phase1_expression=0.320297694209588,0,0,0.30246421130683,0,0.16787927191189,0.467225281191051,0.645616617207881,0.84473233291,0.468129052643987,1.71217968225505,1.11681022593471,1.19840510951844,0.0874204024189974,0.999329285446988,0,0,0.315462165358238,1.23402990245165,1.27316895539409,0,0.397163804803541,1.04479915655574,0.639969691173627,0.22940928106717,0,0,0.430942465371778,0.760093677825496,0,0,0,0.61506478758457,0,0,0.166234645358492,0.204169356262369,0,0.7813353445238,0,0,0,0,1.1330713617802,1.11514624341466,1.28482726513177,0,0.436050312760893,0.659058548203415,0.194429899074283,1.39986421625363,1.43752564364972,0.838913030288682,0,0.336093799142464,1.02903774414379,2.57880095944881,1.54701627683233,0.404632921719196,1.05798195854407,0,2.03306719241479,0.889294796111139,0.449949858640699,0,0.7104801149461,0.898800331555214,0.384218305321555,0.414758449233911,0.675029691658453,0.420649922702764,0.571301968807607,0.220868540951614,0.61245399607477,0.479227355091182,0.919218786610021,2.20231761998777,0.255374676170375,0.46081959976873,0.263772575460388,0.365950574409639,2.08365348222704,1.3959149950069,0.56276261003168,0.45839474333043,0.883885756421003,0,0.186399445825301,0.227178579999552,0.226714680320357,1.15945795480671,0,0,0.539703191637817,0,0.448026887097336,0.421333260395256,0.681721290312231,3.11743205523443,0.70667914902068,0.14084341977668,0,0,0,0.649473123033642,1.26679932737549,0.505524445014783,0.22836775943812,0,0.29688427812965,0,1.52232739156071,0.230615497256059,0.150722640552623,0.587943535678524,0,0,0.144599356919912,18.5768215909474,0.323533699894818,0.220841518460394,0,13.0474232852686,0,0,0.766371165625774,0,0,0,0.299581278809645,0.457500602818626,0.125654352112864,0.173824320192276,0,0.62336413367868,0,0.101839363850316,0.124406970610093,0.505445516867349,0.420883711772948,0,0.229902104433473,0.180062129805349,0.452114453507145,0,0,0,0,0.646703978798527,0.189106080167819,0.175951124163949,0.219195732427575,1.66828349535359,0.348252166522167,0.411564272815887,0.199034266818493,0,0.257347907114715,0.284163499395593,0,0.469052119962192,0.180062061461015,0.23674473558521,0.393528463494808,0.462801338662135,0,0.268273401399619,0.116765342367169,0.16455984991348,0.164167464079095,0.0810688095458557,0.146199987425332,0.219550115291051,0,0.841159794256509,0.514523061896422,0,0.264450566663544,0.426576501070468,0.464473343720877,0.257734922644187,0.201683524623343,0,0.380451252225118,0,0,0,0,0,0,0.216138049874694,0.398282546508734,0.569003702859245,0.228497025219458,1.1270773567308,0.610953983535943,0.387904974335251,0,0.0632365371242573,0.295220295959204,0.470996183524124,0.246794327843601,0,0,0.196558995113203,0.224862112384854,0.405720242777006,0.241177159752417,0,0.287696137450811,0.486405680325106,0.274561413188081,0,0,0.312037673114561,0.252578877947112,0,0,0,0.37898282354097,0.488894929326078,0.169745085775188,0.234690248288502,0.335012514883631,0.476087281772027,0.195133647857799,0.157635144106191,0,0.159454768657487,0.327726629431476,0,0.433947175744535,0,2.17562273527484,0,0,0.321101179975584,0.468846746368813,0.819674726883377,0.504941854408746,0,2.34263246577983,0.646270193198397,0,0,0,0.809621403349789,0.292255857911312,0.790575555893047,0,0,0.890328018336276,0,0.164970122972535,0,0.242780636154981,0.302323556964751,0.377210159511796,0.295301892880773,0.307435147943927,0,0.363533729477506,0.356497378384721,0.948110273807448,1.05418608574999,0,0.340439605753788,0.36012218806262,0.517434735131018,0.214337035031592,0.354680467284547,0,0.164549020602121,0.304464949114599,0.23467170806371,0.42366414172764,0.882113592219848,0.16488625294148,0.322928853391811,0.180938774784468,0.238744688006273,0,0.582961673259701,0.18542530201051,0.341741761595705,0.206386867963223,0,0,0,0.457556346413045,0.169978429993855,0.139951452323658,0,0.954670618015114,0.474503990371703,0.406638934253697,0.540026704109006,0.627264888043406,0,0.134864346384821,0.0826534557253359,0.26175594198403,0.129614973291793,0,1.69107881605257,0,0.165458490457098,0.388902376688095,1.16243841129958,0.337912250981556,0.352071715937262,0.13020438484395,0.104859344425711,0.241584120826006,0.576060012515731,0,1.01362607645082,0.616265742988964,0.389762468933385,0.179026695667481,0,0.120195449519969,0,0.201932899896295,0.0762068066549998,0,0.38983152295901,0,0,0.680191150845634,0.443971906748129,0.62799699626633,0.335769232728157,0.386379188064381,0.187682475451182,0.183151624267265,0.214368379079066,0,0,0,0,0.171853182343688,0.685082519770642,0,0.675022500231806,0,0.906284817968409,0,0.518936737920883,0,0.682934423016537,0.486213434136588,0,0.551530525350042,0.44449345560323,0.618105171716683,0.320919209591815,0,0,0.188626341386076,0.187283014939765,0,0.287177344778066,0.476293691283074,0,0.38581844092741,7.82963211526283,0.294397840268795,0.685738504770831,0.177475806159338,0.238436189947321,0.145346416632329,0.188218760830661,0.338458431566706,0.182927972872773,0,0.135804113845862,0.561142271657738,0.593175090620871,0.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| ||
|short_description=p@chr5:67844705..67844708,+ | |short_description=p@chr5:67844705..67844708,+ | ||
}} | }} |
Latest revision as of 13:41, 4 August 2015
Short description: | p@chr5:67844705..67844708, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:67844705..67844708, + |
Coexpression cluster: | MCL_coexpression_mm9:245 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.17e-17 | 7 |
muscle precursor cell | 3.23e-15 | 6 |
muscle cell | 3.23e-15 | 6 |
myoblast | 3.23e-15 | 6 |
multi-potent skeletal muscle stem cell | 6.11e-10 | 9 |
cardiocyte | 1.05e-08 | 3 |
striated muscle cell | 1.05e-08 | 3 |
cardiac muscle cell | 1.05e-08 | 3 |
cardiac muscle myoblast | 1.05e-08 | 3 |
somatic stem cell | 1.99e-08 | 91 |
multi fate stem cell | 1.99e-08 | 91 |
smooth muscle cell | 3.90e-08 | 3 |
vascular associated smooth muscle cell | 3.90e-08 | 3 |
aortic smooth muscle cell | 3.90e-08 | 3 |
smooth muscle myoblast | 3.90e-08 | 3 |
stem cell | 1.26e-07 | 97 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 6.11e-10 | 9 |
striated muscle tissue | 6.11e-10 | 9 |
muscle tissue | 6.11e-10 | 9 |
multilaminar epithelium | 6.11e-10 | 9 |
epithelial vesicle | 6.11e-10 | 9 |
musculature | 6.11e-10 | 9 |
somite | 6.11e-10 | 9 |
myotome | 6.11e-10 | 9 |
presomitic mesoderm | 6.11e-10 | 9 |
presumptive segmental plate | 6.11e-10 | 9 |
dermomyotome | 6.11e-10 | 9 |
trunk paraxial mesoderm | 6.11e-10 | 9 |
musculature of body | 6.97e-09 | 10 |
vessel | 2.94e-08 | 5 |
epithelial tube open at both ends | 2.94e-08 | 5 |
blood vessel | 2.94e-08 | 5 |
vasculature | 2.94e-08 | 5 |
vascular system | 2.94e-08 | 5 |
blood vasculature | 2.94e-08 | 5 |
vascular cord | 2.94e-08 | 5 |
smooth muscle tissue | 3.90e-08 | 3 |
blood vessel smooth muscle | 3.90e-08 | 3 |
arterial system smooth muscle | 3.90e-08 | 3 |
artery smooth muscle tissue | 3.90e-08 | 3 |
aorta smooth muscle tissue | 3.90e-08 | 3 |
dense mesenchyme tissue | 5.11e-08 | 11 |
paraxial mesoderm | 5.11e-08 | 11 |
presumptive paraxial mesoderm | 5.11e-08 | 11 |