FFCP PHASE1:Hg19::chr2:158114442..158114458,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:158114442..158114458,+
|short_description=p5@GALNT5
|description=CAGE_peak_5_at_GALNT5_5end
|association_with_transcript=102bp_to_NM_014568,uc002tzg.2,uc01...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=11227 | |EntrezGene=11227 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4127 | |HGNC=4127 | ||
|TSSclassifier=strong | |||
|UniProt=A5PKZ1,Q7Z7M9 | |UniProt=A5PKZ1,Q7Z7M9 | ||
|association_with_transcript=102bp_to_NM_014568,uc002tzg.2,uc010zci.1_5end | |||
|cluster_id=chr2:158114442..158114458,+ | |||
|coexpression_cluster_id=C1496 | |||
|description=CAGE_peak_5_at_GALNT5_5end | |||
|id=chr2:158114442..158114458,+ | |||
|ontology_enrichment_celltype=CL:0000055!8.45e-21!180;CL:0000057!2.41e-16!75;CL:0002620!5.31e-11!23;CL:0002371!2.10e-09!591;CL:0000680!7.59e-09!57;CL:0000056!7.59e-09!57;CL:0000355!7.59e-09!57;CL:0000359!3.97e-08!32;CL:0000187!1.14e-07!54;CL:0000192!1.99e-07!42;CL:0000514!1.99e-07!42;CL:0000144!8.13e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0002620;7.70e-15;23!CL:0002540;3.49e-07;6!CL:0000057;7.32e-07;73!CL:0000138;8.89e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.85e-17,76;CL:0002620,1.06e-14,23;CL:0002540,4.57e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;1.02e-09;5!DOID:450;1.02e-09;5!DOID:66;1.02e-09;5!DOID:423;1.02e-09;5!DOID:0080000;1.02e-09;5!DOID:11722;1.02e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,9.83e-10,5;DOID:450,9.83e-10,5;DOID:66,9.83e-10,5;DOID:423,9.83e-10,5;DOID:0080000,9.83e-10,5;DOID:11722,9.83e-10,5 | |||
|ontology_enrichment_uberon=UBERON:0003102!1.20e-14!95;UBERON:0000914!5.45e-13!83;UBERON:0002329!5.45e-13!83;UBERON:0003077!5.45e-13!83;UBERON:0003059!5.45e-13!83;UBERON:0007282!5.45e-13!83;UBERON:0009618!5.45e-13!83;UBERON:0007285!5.45e-13!83;UBERON:0000486!8.51e-09!82;UBERON:0002199!1.28e-08!45;UBERON:0002416!1.28e-08!45;UBERON:0004290!1.66e-08!70;UBERON:0002097!2.44e-08!40;UBERON:0001134!3.47e-08!61;UBERON:0002036!3.47e-08!61;UBERON:0003082!3.47e-08!61;UBERON:0002385!4.18e-08!63;UBERON:0001015!4.18e-08!63;UBERON:0000383!4.18e-08!63;UBERON:0000475!7.28e-08!365;UBERON:0000165!1.61e-07!28;UBERON:0000930!1.61e-07!28;UBERON:0000075!5.90e-07!13;UBERON:0005944!5.90e-07!13;UBERON:0004288!5.90e-07!13;UBERON:0003089!5.90e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;1.06e-07;41!UBERON:0000075;2.33e-07;16!UBERON:0011137;2.53e-07;11!UBERON:0010323;2.53e-07;11!UBERON:0001434;4.36e-07;36!UBERON:0001828;5.80e-07;8!UBERON:0002199;9.70e-07;46!UBERON:0002416;9.70e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,6.05e-11,99;UBERON:0002097,8.58e-10,41;UBERON:0002199,2.77e-09,46;UBERON:0002416,2.77e-09,46;UBERON:0000075,1.92e-07,16;UBERON:0010323,2.41e-07,11;UBERON:0001828,4.30e-07,8 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0.422863212287913,0,0,0,2.53299878168311,0.631719873426831,0,0.245733936501509,0,0,0.263766978228454,2.10402800032079,1.98838425436749,0,0,0.730310090387373,0,0,0,0,0.85870796139317,0.273748850145768,0,0,0,0,0,0,0,0,0.90361775633475,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,1.80719576192283,1.00267582127178,2.02785126545153,3.9764297352555,3.40644409211845,0,0,0.087834785693126,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,1.98788780678127,0.759783069987479,8.73900593367244,1.14734648299525,0.709336764396714,0,1.06748995729705,1.2333377420858,0,0.134710672069688,0,0.151357427644931,0,0,0.936480230490962,0,0.747243402759005,0.117434498643765,0,0,2.44985005505872,0.491337269247072,1.23990937410919,10.6920257155385,4.94533858557114,0,0,0.336672227908132,0.250237039743928,4.43302584774693,7.02364193409341,3.37136575378922,5.10809400282429,0.680593098960126,8.07253360599879,4.69826255400848,2.54318281391474,11.4034616512073,3.29768093563004,12.8820270022815,4.46680455195816,10.6329089311998,3.60516919096435,5.04867548488229,2.48534726334208,2.10139873864455,11.3603069605317,4.23158812556089,0.169560592310488,1.93260853163297,0.818238361772504,1.43402297694502,0,0,0.116193942869518,0,0,0,1.56449532329816,0.643240938192885,0,3.25057549622385,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.439001141634502,0,0.100528972411631,0.555530670951178,0,0,0,0.115930404975077,4.69634776943287,0,0,0,0,0,0,0,0,0,6.2153387433578,2.55195175036296,0,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,1.71072446022705,0.102827492703324,0,0,0,0,0,1.55126058909333,0,0,0.531876233169741,0,1.02882949704857,4.25547396069835,0.532844358032199,0,1.62786481617433,0,0.65147236858747,0,2.37585561880029,0.301439377059586,0,0,0,0,0,0.958499421966331,0,1.42636905040718,1.01346914667305,0.821905290201534,1.43248770591916,0,0,0,0,0,0,0,0,0,0,0,0,0.613457458595699,0,0.813795071099207,2.07970861530807,2.49800584316026,2.20783381047509,1.40569697991256,2.40756879782175,0,0,2.65690239414175,1.10621501125022,1.39013783148933,0,0,0,0,0,0.303127571446259,0,0.30239029332968,0.744323423456331,6.44540287809862,0.841980283299221,0.128139149255701,2.04682899626681,0.64341568457443,2.96836132889982,0,0.355123450626254,0.574890092096664,0,0.581051892299796,0.362578348774867,0.200506470303285,0.368323955743585,0.459257792658427,1.0925470080403,0.524497659837696,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0.657779629937804,1.3071772551245,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0.751941714077915,1.16013355131383,0.255679882248303,0.534192213880424,0.661139661443912,1.53752053892085,2.04180339991335,0.4046311234222,0.929691098594572,14.7961803010401,1.3940745403212,0,0,2.60979897622522,2.96518750566272,1.43124886741991,0,0.632758849437452,0.571890581771475,0,0,0.318203247925937,0.78494864019923,0.359744915166629,0,0.235624804691373,0.404364963146632,1.58510321173008,0.421258456238981,0,3.65570234446927,2.11300293513511,0.409499734223957,0.989838023675989,0,0.551365343546124,0.66343897524122,0.876901770507525,0,0.655894752046633,1.82619339266434,0,0.281695602532241,2.00775893085672,0.491245205065606,3.5667105148125,0,0.844430541190656,0,0,0.699869440489966,0.962221127255121,0.670302275535787,0,0,0,0,0,0.689170200620878,2.53723804616085,3.0585488285695,1.13929437434833,0,0,1.29694662238543,2.16012574895246,3.17250070517708,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67043704337145,1.23087398947712,0,0,0,0.18714054040822,0,0,0.222886768554957,0.284136146806413,0.95497793895076,0.296964680832639,0.614321404198464,0,0,0,0,0,0,0,0,3.47713520507326,0.615424027305347,8.08702927920699,1.52776196950456,0,0,0,0,0,0,0,0,0,0,0,1.0241410345695,0,0,0,0,0,0,0,0,1.21637185924347,0.295547618953547,0,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0.457987967009312,0,0,0,1.82832850090172,1.35357396370308,2.54881294613061,3.18861015254101,1.3282761290693,1.43042921082341,0,0,0,0,0,0.442287822516696,0.611030144933625,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0.85381197895741,0,0.432271251462318,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,1.80149941771202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670869375198532,0,0,0,0.717149357331379,0,0,0,0,0,0.864221491201268,0.326587360109409,0,0.903017728242729,8.17862504570024,0,0,1.32506888912221,0,0.13223260174269,0,0,0.213574825135389,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0,1.14681839138014,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0.554805861502613,4.16686611605196,1.50940741051545,7.11848977277229,0.915360273587694,0.604923695052956,0.15543720058278,0.295710299979268,1.5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| ||
|short_description=p5@GALNT5 | |||
}} | }} |
Latest revision as of 17:08, 17 September 2015
Short description: | p5@GALNT5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_GALNT5_5end |
Coexpression cluster: | C1496_Fibroblast_Smooth_papillotubular_basal_liposarcoma_tenocyte_mesenchymal |
Association with transcript: | 102bp_to_NM_014568, uc002tzg.2, uc010zci.1_5end |
EntrezGene: | GALNT5 |
HGNC: | 4127 |
UniProt: | A5PKZ1Q7Z7M9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.85e-17 | 76 |
skin fibroblast | 1.06e-14 | 23 |
mesenchymal stem cell of the bone marrow | 4.57e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
surface structure | 6.05e-11 | 99 |
skin of body | 8.58e-10 | 41 |
integument | 2.77e-09 | 46 |
integumental system | 2.77e-09 | 46 |
subdivision of skeletal system | 1.92e-07 | 16 |
cranial skeletal system | 2.41e-07 | 11 |
gingiva | 4.30e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 9.83e-10 | 5 |
myotonic disease | 9.83e-10 | 5 |
muscle tissue disease | 9.83e-10 | 5 |
myopathy | 9.83e-10 | 5 |
muscular disease | 9.83e-10 | 5 |
myotonic dystrophy | 9.83e-10 | 5 |