FFCP PHASE1:Mm9::chr9:106356278..106356292,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=59092 | |EntrezGene=59092 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1773 | |MCL_coexpression_id=1773 | ||
|TSSclassifier=NA | |||
|UniProt=P57724,Q8BP63 | |UniProt=P57724,Q8BP63 | ||
|association_with_transcript=90bp_to_ENSMUST00000024260,uc009rjt.2_5end | |association_with_transcript=90bp_to_ENSMUST00000024260,uc009rjt.2_5end | ||
|cluster_id=chr9:106356278..106356292,+ | |||
|description=CAGE_peak_3_at_Pcbp4_5end | |description=CAGE_peak_3_at_Pcbp4_5end | ||
|id=chr9:106356278..106356292,+ | |id=chr9:106356278..106356292,+ | ||
|ontology_enrichment_celltype=CL:0000221!2.48e-26!44;CL:0000133!2.48e-26!44;CL:0002319!1.40e-25!43;CL:0000055!1.61e-23!50;CL:0000540!9.32e-19!33;CL:0000047!9.32e-19!33;CL:0000031!9.32e-19!33;CL:0000404!9.32e-19!33;CL:0000393!5.72e-18!39;CL:0000211!5.72e-18!39;CL:0000117!2.01e-13!23;CL:0000337!2.01e-13!23;CL:0002321!4.48e-10!70;CL:0000220!4.48e-10!70;CL:0000333!1.31e-07!10;CL:0000095!1.31e-07!10;CL:0000243!1.31e-07!10;CL:0000123!1.31e-07!10;CL:0000125!1.31e-07!10;CL:0000030!1.31e-07!10;CL:0000339!1.31e-07!10 | |ontology_enrichment_celltype=CL:0000221!2.48e-26!44;CL:0000133!2.48e-26!44;CL:0002319!1.40e-25!43;CL:0000055!1.61e-23!50;CL:0000540!9.32e-19!33;CL:0000047!9.32e-19!33;CL:0000031!9.32e-19!33;CL:0000404!9.32e-19!33;CL:0000393!5.72e-18!39;CL:0000211!5.72e-18!39;CL:0000117!2.01e-13!23;CL:0000337!2.01e-13!23;CL:0002321!4.48e-10!70;CL:0000220!4.48e-10!70;CL:0000333!1.31e-07!10;CL:0000095!1.31e-07!10;CL:0000243!1.31e-07!10;CL:0000123!1.31e-07!10;CL:0000125!1.31e-07!10;CL:0000030!1.31e-07!10;CL:0000339!1.31e-07!10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.36e-31,44;CL:0000133,1.36e-31,44;CL:0002319,1.12e-30,43;CL:0000540,2.13e-22,33;CL:0000047,2.13e-22,33;CL:0000031,2.13e-22,33;CL:0000404,2.13e-22,33;CL:0000393,1.43e-19,39;CL:0000211,1.43e-19,39;CL:0000117,6.25e-16,23;CL:0000337,6.25e-16,23;CL:0002321,4.16e-14,70;CL:0000333,6.84e-09,10;CL:0000095,6.84e-09,10;CL:0000243,6.84e-09,10;CL:0000123,6.84e-09,10;CL:0000125,6.84e-09,10;CL:0000030,6.84e-09,10;CL:0000339,6.84e-09,10;CL:0002453,3.17e-07,8;CL:0000107,4.27e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.73e-35!75;UBERON:0001016!5.73e-35!75;UBERON:0001017!2.76e-33!73;UBERON:0005743!2.76e-33!73;UBERON:0004121!6.24e-33!102;UBERON:0000924!6.24e-33!102;UBERON:0006601!6.24e-33!102;UBERON:0000033!3.30e-23!63;UBERON:0002346!8.31e-23!71;UBERON:0003075!8.31e-23!71;UBERON:0007284!8.31e-23!71;UBERON:0001049!4.01e-20!52;UBERON:0005068!4.01e-20!52;UBERON:0006241!4.01e-20!52;UBERON:0007135!4.01e-20!52;UBERON:0000955!5.25e-19!50;UBERON:0006238!5.25e-19!50;UBERON:0002616!1.06e-18!49;UBERON:0003056!2.39e-17!49;UBERON:0002020!1.55e-15!34;UBERON:0003080!4.51e-14!40;UBERON:0002780!1.49e-13!39;UBERON:0001890!1.49e-13!39;UBERON:0006240!1.49e-13!39;UBERON:0002791!3.50e-13!29;UBERON:0003528!3.50e-13!29;UBERON:0001893!3.50e-13!29;UBERON:0000153!4.83e-10!94;UBERON:0007811!1.54e-09!86;UBERON:0000956!1.79e-09!21;UBERON:0001869!1.79e-09!21;UBERON:0000203!1.79e-09!21;UBERON:0000010!1.72e-07!11;UBERON:0000025!1.72e-07!114;UBERON:0004111!1.95e-07!122;UBERON:0002619!2.16e-07!17;UBERON:0003076!6.52e-07!12;UBERON:0003057!6.52e-07!12 | |ontology_enrichment_uberon=UBERON:0000073!5.73e-35!75;UBERON:0001016!5.73e-35!75;UBERON:0001017!2.76e-33!73;UBERON:0005743!2.76e-33!73;UBERON:0004121!6.24e-33!102;UBERON:0000924!6.24e-33!102;UBERON:0006601!6.24e-33!102;UBERON:0000033!3.30e-23!63;UBERON:0002346!8.31e-23!71;UBERON:0003075!8.31e-23!71;UBERON:0007284!8.31e-23!71;UBERON:0001049!4.01e-20!52;UBERON:0005068!4.01e-20!52;UBERON:0006241!4.01e-20!52;UBERON:0007135!4.01e-20!52;UBERON:0000955!5.25e-19!50;UBERON:0006238!5.25e-19!50;UBERON:0002616!1.06e-18!49;UBERON:0003056!2.39e-17!49;UBERON:0002020!1.55e-15!34;UBERON:0003080!4.51e-14!40;UBERON:0002780!1.49e-13!39;UBERON:0001890!1.49e-13!39;UBERON:0006240!1.49e-13!39;UBERON:0002791!3.50e-13!29;UBERON:0003528!3.50e-13!29;UBERON:0001893!3.50e-13!29;UBERON:0000153!4.83e-10!94;UBERON:0007811!1.54e-09!86;UBERON:0000956!1.79e-09!21;UBERON:0001869!1.79e-09!21;UBERON:0000203!1.79e-09!21;UBERON:0000010!1.72e-07!11;UBERON:0000025!1.72e-07!114;UBERON:0004111!1.95e-07!122;UBERON:0002619!2.16e-07!17;UBERON:0003076!6.52e-07!12;UBERON:0003057!6.52e-07!12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.47e-40,75;UBERON:0001017,1.54e-38,73;UBERON:0004121,5.19e-38,95;UBERON:0000924,5.19e-38,95;UBERON:0006601,5.19e-38,95;UBERON:0002346,3.18e-28,64;UBERON:0003075,3.18e-28,64;UBERON:0007284,3.18e-28,64;UBERON:0010371,5.87e-25,73;UBERON:0010314,1.65e-24,92;UBERON:0000073,4.44e-24,54;UBERON:0001049,9.47e-23,52;UBERON:0005068,9.47e-23,52;UBERON:0006241,9.47e-23,52;UBERON:0007135,9.47e-23,52;UBERON:0000955,2.43e-19,47;UBERON:0006238,2.43e-19,47;UBERON:0002616,5.60e-19,46;UBERON:0003056,7.50e-19,49;UBERON:0002020,7.44e-18,34;UBERON:0003080,1.60e-15,40;UBERON:0003528,5.15e-15,29;UBERON:0002791,5.15e-15,29;UBERON:0001893,5.15e-15,29;UBERON:0002780,6.61e-15,39;UBERON:0001890,6.61e-15,39;UBERON:0006240,6.61e-15,39;UBERON:0000956,1.51e-10,21;UBERON:0001869,1.51e-10,21;UBERON:0000203,1.51e-10,21;UBERON:0000010,9.52e-09,11;UBERON:0002619,4.62e-08,17;UBERON:0003076,4.75e-08,12;UBERON:0003057,4.75e-08,12;UBERON:0002410,4.27e-07,9;UBERON:0000025,4.76e-07,114 | |||
|phase1_expression=4.48416771893423,0,0,0,0,0.33575854382378,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,4.5072943780067,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.881277725829041,0.506884656097573,1.46837401729345,3.9119567217402,23.1106665763273,14.9386604259441,10.6936444490856,7.27929392451885,23.0004102983955,0,0,0,3.34437266846731,0.85960031981627,2.06268836910977,10.9250888864183,7.93486468908049,9.50747105259269,4.06613438482959,2.66788438833342,0.449949858640699,0,0.7104801149461,14.9800055259202,29.5848095097597,11.4058573539325,11.4755047581937,12.4091727197315,10.8547374073445,9.93908434282261,11.5141351262057,11.5973019932066,12.8690630125403,11.0115880999389,7.53355294702608,8.90917892886212,10.1552441552249,6.95306091378313,9.37644067002168,8.93385596804419,4.50210088025344,4.5839474333043,5.89257170947335,3.84403538157578,4.65998614563251,22.3392270332893,22.3691817916085,0,0,0,0,0,0,2.24711072210803,0.511290967734173,0.519572009205738,0.70667914902068,13.3801248787846,0,0,0,0,0.506719730950197,0.505524445014783,0.5709193985953,0,0.29688427812965,0.520455980298408,0.304465478312141,0.461230994512117,1.20578112442098,0.705532242814229,0.502666365318702,0.247194967734374,0.722996784599558,0,1.29413479957927,0,0.484875253135222,0,3.80615036115011,3.56059401582874,0,0,0,0,8.08869452786043,7.32000964509802,4.77486538028885,3.47648640384553,3.83573185995496,7.06479351502504,6.00292673350703,1.2220723662038,0.248813941220186,0.758168275301024,0.841767423545896,3.3831315170303,8.04657365517155,6.84236093260327,3.61691562805716,7.48401490664606,8.71173297936978,8.4331552103756,2.32833033665114,2.15567992932842,2.08016688184601,2.28736461413134,2.19195732427575,1.11218899690239,2.089512999133,0.823128545631774,0.398068533636986,0,0,0,2.89976081549703,2.11073453982987,2.52086886045421,3.07768156260773,1.77087808572663,2.1597395804233,0.697601834251224,1.60964040839772,1.28441876603886,0.987359099480883,1.31333971263276,1.13496333364198,1.31579988682799,0.878200461164203,1.61047702512446,4.20579897128254,5.04232600658494,0,0.264450566663544,2.13288250535234,2.09013004674395,1.80414445850931,0,0.889512175379481,0.380451252225118,0.949058123089023,0.494096864172033,0.251335208800269,0,0.19496408711912,0,0.216138049874694,0.199141273254367,1.89667900953082,0.456994050438915,0,0.203651327845314,0.387904974335251,0.841629838683823,0.189709611372772,0.147610147979602,0.156998727841375,0.123397163921801,0,0.500535317148282,0.393117990226406,0,0,0,0.25462585178142,0,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0,3.41084541186873,0.651859905768103,1.18821560042632,0.704070744865506,0,0.714130922658041,0.390267295715598,1.41871629695572,0.664394068946325,0.318909537314974,0.163863314715738,0.518054945597687,0.433947175744535,0,0,0.491764273019036,0,10.7568895291821,9.61135830056066,0.819674726883377,2.27223834483936,7.2566890465739,5.85658116444958,6.03185513651837,10.0366895140072,15.1503098376028,13.3045969470751,8.90583543684768,7.3063964477828,9.88219444866309,3.21321316421807,0.141940085208269,0.534196811001766,0.651547837414304,0.329940245945071,0,2.42780636154981,0.604647113929502,0.754420319023592,0.885905678642318,0.307435147943927,0.258428293168221,1.09060118843252,0,0.316036757935816,2.10837217149998,0,0,3.42116078659489,4.39819524861365,2.14337035031592,0.709360934569094,1.96205699362278,0.658196082408484,2.43571959291679,0.23467170806371,0,0.661585194164886,0.49465875882444,1.45317984026315,0.482503399425247,0.477489376012546,0,0.291480836629851,12.0526446306831,0,0,0.185194527369712,0,0,0,0,0,0,1.90934123603023,2.37251995185852,1.42323626988794,0.648032044930808,0.209088296014469,0.87345025498471,0.404593039154462,0.495920734352016,0.523511883968059,0.129614973291793,0.621339313086926,2.25477175473676,0.299033092087958,0.330916980914195,0.388902376688095,0.258319646955462,0,0.117357238645754,0.13020438484395,0.524296722128554,0.241584120826006,3.16833006883652,0,0.202725215290164,0.308132871494482,0.129920822977795,0.716106782669926,0.198681354781265,0.120195449519969,0,0.100966449948148,0,0,0,0.192423683280659,0,0.906921534460845,1.10992976687032,0.62799699626633,1.34307693091263,0.772758376128762,0,0,0,0,6.7770221114048,2.76195141904306,3.43737308063638,4.81188910562325,6.16574267793578,0.755393897389701,2.70009000092722,1.80128481289688,5.43770890781046,3.10656187051092,4.8780053364563,5.1873233542134,4.95127456686989,3.64660075602441,1.88651846365184,2.75765262675021,1.77797382241292,1.85431551515005,1.60459604795908,1.01078884705519,0.760437899670719,1.88626341386076,1.31098110457835,1.60062881012173,1.7230640686684,1.90517476513229,1.39061191133827,2.70072908649187,1.23625770240992,1.32479028120958,0,1.06485483695602,0.715308569841963,1.30811774969096,1.88218760830661,1.35383372626682,2.19513567447327,0.789209134313529,2.30866993537965,1.68342681497322,2.01679530811096,1.28055827088233,2.04615521584845,2.32405261778949,1.92906610981141,3.99696924700713,1.87145286756327,0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|phase1_expression=4.48416771893423,0,0,0,0,0.33575854382378,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,4.5072943780067,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.881277725829041,0.506884656097573,1.46837401729345,3.9119567217402,23.1106665763273,14.9386604259441,10.6936444490856,7.27929392451885,23.0004102983955,0,0,0,3.34437266846731,0.85960031981627,2.06268836910977,10.9250888864183,7.93486468908049,9.50747105259269,4.06613438482959,2.66788438833342,0.449949858640699,0,0.7104801149461,14.9800055259202,29.5848095097597,11.4058573539325,11.4755047581937,12.4091727197315,10.8547374073445,9.93908434282261,11.5141351262057,11.5973019932066,12.8690630125403,11.0115880999389,7.53355294702608,8.90917892886212,10.1552441552249,6.95306091378313,9.37644067002168,8.93385596804419,4.50210088025344,4.5839474333043,5.89257170947335,3.84403538157578,4.65998614563251,22.3392270332893,22.3691817916085,0,0,0,0,0,0,2.24711072210803,0.511290967734173,0.519572009205738,0.70667914902068,13.3801248787846,0,0,0,0,0.506719730950197,0.505524445014783,0.5709193985953,0,0.29688427812965,0.520455980298408,0.304465478312141,0.461230994512117,1.20578112442098,0.705532242814229,0.502666365318702,0.247194967734374,0.722996784599558,0,1.29413479957927,0,0.484875253135222,0,3.80615036115011,3.56059401582874,0,0,0,0,8.08869452786043,7.32000964509802,4.77486538028885,3.47648640384553,3.83573185995496,7.06479351502504,6.00292673350703,1.2220723662038,0.248813941220186,0.758168275301024,0.841767423545896,3.3831315170303,8.04657365517155,6.84236093260327,3.61691562805716,7.48401490664606,8.71173297936978,8.4331552103756,2.32833033665114,2.15567992932842,2.08016688184601,2.28736461413134,2.19195732427575,1.11218899690239,2.089512999133,0.823128545631774,0.398068533636986,0,0,0,2.89976081549703,2.11073453982987,2.52086886045421,3.07768156260773,1.77087808572663,2.1597395804233,0.697601834251224,1.60964040839772,1.28441876603886,0.987359099480883,1.31333971263276,1.13496333364198,1.31579988682799,0.878200461164203,1.61047702512446,4.20579897128254,5.04232600658494,0,0.264450566663544,2.13288250535234,2.09013004674395,1.80414445850931,0,0.889512175379481,0.380451252225118,0.949058123089023,0.494096864172033,0.251335208800269,0,0.19496408711912,0,0.216138049874694,0.199141273254367,1.89667900953082,0.456994050438915,0,0.203651327845314,0.387904974335251,0.841629838683823,0.189709611372772,0.147610147979602,0.156998727841375,0.123397163921801,0,0.500535317148282,0.393117990226406,0,0,0,0.25462585178142,0,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0,3.41084541186873,0.651859905768103,1.18821560042632,0.704070744865506,0,0.714130922658041,0.390267295715598,1.41871629695572,0.664394068946325,0.318909537314974,0.163863314715738,0.518054945597687,0.433947175744535,0,0,0.491764273019036,0,10.7568895291821,9.61135830056066,0.819674726883377,2.27223834483936,7.2566890465739,5.85658116444958,6.03185513651837,10.0366895140072,15.1503098376028,13.3045969470751,8.90583543684768,7.3063964477828,9.88219444866309,3.21321316421807,0.141940085208269,0.534196811001766,0.651547837414304,0.329940245945071,0,2.42780636154981,0.604647113929502,0.754420319023592,0.885905678642318,0.307435147943927,0.258428293168221,1.09060118843252,0,0.316036757935816,2.10837217149998,0,0,3.42116078659489,4.39819524861365,2.14337035031592,0.709360934569094,1.96205699362278,0.658196082408484,2.43571959291679,0.23467170806371,0,0.661585194164886,0.49465875882444,1.45317984026315,0.482503399425247,0.477489376012546,0,0.291480836629851,12.0526446306831,0,0,0.185194527369712,0,0,0,0,0,0,1.90934123603023,2.37251995185852,1.42323626988794,0.648032044930808,0.209088296014469,0.87345025498471,0.404593039154462,0.495920734352016,0.523511883968059,0.129614973291793,0.621339313086926,2.25477175473676,0.299033092087958,0.330916980914195,0.388902376688095,0.258319646955462,0,0.117357238645754,0.13020438484395,0.524296722128554,0.241584120826006,3.16833006883652,0,0.202725215290164,0.308132871494482,0.129920822977795,0.716106782669926,0.198681354781265,0.120195449519969,0,0.100966449948148,0,0,0,0.192423683280659,0,0.906921534460845,1.10992976687032,0.62799699626633,1.34307693091263,0.772758376128762,0,0,0,0,6.7770221114048,2.76195141904306,3.43737308063638,4.81188910562325,6.16574267793578,0.755393897389701,2.70009000092722,1.80128481289688,5.43770890781046,3.10656187051092,4.8780053364563,5.1873233542134,4.95127456686989,3.64660075602441,1.88651846365184,2.75765262675021,1.77797382241292,1.85431551515005,1.60459604795908,1.01078884705519,0.760437899670719,1.88626341386076,1.31098110457835,1.60062881012173,1.7230640686684,1.90517476513229,1.39061191133827,2.70072908649187,1.23625770240992,1.32479028120958,0,1.06485483695602,0.715308569841963,1.30811774969096,1.88218760830661,1.35383372626682,2.19513567447327,0.789209134313529,2.30866993537965,1.68342681497322,2.01679530811096,1.28055827088233,2.04615521584845,2.32405261778949,1.92906610981141,3.99696924700713,1.87145286756327,0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| ||
|short_description=p3@Pcbp4 | |short_description=p3@Pcbp4 | ||
}} | }} |
Latest revision as of 02:55, 26 September 2015
Short description: | p3@Pcbp4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Pcbp4_5end |
Coexpression cluster: | MCL_coexpression_mm9:1773 |
Association with transcript: | 90bp_to_ENSMUST00000024260, uc009rjt.2_5end |
EntrezGene: | Pcbp4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.36e-31 | 44 |
neurectodermal cell | 1.36e-31 | 44 |
neural cell | 1.12e-30 | 43 |
neuron | 2.13e-22 | 33 |
neuronal stem cell | 2.13e-22 | 33 |
neuroblast | 2.13e-22 | 33 |
electrically signaling cell | 2.13e-22 | 33 |
electrically responsive cell | 1.43e-19 | 39 |
electrically active cell | 1.43e-19 | 39 |
CNS neuron (sensu Vertebrata) | 6.25e-16 | 23 |
neuroblast (sensu Vertebrata) | 6.25e-16 | 23 |
embryonic cell | 4.16e-14 | 70 |
migratory neural crest cell | 6.84e-09 | 10 |
neuron associated cell | 6.84e-09 | 10 |
glial cell (sensu Vertebrata) | 6.84e-09 | 10 |
neuron associated cell (sensu Vertebrata) | 6.84e-09 | 10 |
glial cell | 6.84e-09 | 10 |
glioblast | 6.84e-09 | 10 |
glioblast (sensu Vertebrata) | 6.84e-09 | 10 |
oligodendrocyte precursor cell | 3.17e-07 | 8 |
autonomic neuron | 4.27e-07 | 9 |