FFCP PHASE1:Mm9::chr9:35366107..35366133,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=30959 | |EntrezGene=30959 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |MCL_coexpression_id=1 | ||
|TSSclassifier=NA | |||
|UniProt=Q9QY15 | |UniProt=Q9QY15 | ||
|association_with_transcript=-52bp_to_ENSMUST00000034612,NM_013932,uc012gqi.1_5end | |association_with_transcript=-52bp_to_ENSMUST00000034612,NM_013932,uc012gqi.1_5end | ||
|cluster_id=chr9:35366107..35366133,- | |||
|description=CAGE_peak_2_at_Ddx25_5end | |description=CAGE_peak_2_at_Ddx25_5end | ||
|id=chr9:35366107..35366133,- | |id=chr9:35366107..35366133,- | ||
|ontology_enrichment_celltype=CL:0000117!6.52e-14!23;CL:0000337!6.52e-14!23;CL:0000540!9.54e-14!33;CL:0000047!9.54e-14!33;CL:0000031!9.54e-14!33;CL:0000404!9.54e-14!33;CL:0000221!4.91e-10!44;CL:0000133!4.91e-10!44;CL:0002319!6.94e-10!43;CL:0000393!1.41e-09!39;CL:0000211!1.41e-09!39 | |ontology_enrichment_celltype=CL:0000117!6.52e-14!23;CL:0000337!6.52e-14!23;CL:0000540!9.54e-14!33;CL:0000047!9.54e-14!33;CL:0000031!9.54e-14!33;CL:0000404!9.54e-14!33;CL:0000221!4.91e-10!44;CL:0000133!4.91e-10!44;CL:0002319!6.94e-10!43;CL:0000393!1.41e-09!39;CL:0000211!1.41e-09!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.95e-17,23;CL:0000337,3.95e-17,23;CL:0000540,1.07e-13,33;CL:0000047,1.07e-13,33;CL:0000031,1.07e-13,33;CL:0000404,1.07e-13,33;CL:0000393,6.32e-10,39;CL:0000211,6.32e-10,39;CL:0000221,7.03e-09,44;CL:0000133,7.03e-09,44;CL:0002319,1.09e-08,43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.80e-28!73;UBERON:0005743!8.80e-28!73;UBERON:0000073!2.90e-27!75;UBERON:0001016!2.90e-27!75;UBERON:0002346!5.68e-26!71;UBERON:0003075!5.68e-26!71;UBERON:0007284!5.68e-26!71;UBERON:0001049!2.16e-24!52;UBERON:0005068!2.16e-24!52;UBERON:0006241!2.16e-24!52;UBERON:0007135!2.16e-24!52;UBERON:0004121!1.16e-23!102;UBERON:0000924!1.16e-23!102;UBERON:0006601!1.16e-23!102;UBERON:0000955!1.66e-23!50;UBERON:0006238!1.66e-23!50;UBERON:0002616!7.26e-23!49;UBERON:0000033!4.77e-22!63;UBERON:0003080!6.66e-21!40;UBERON:0003056!7.51e-21!49;UBERON:0002780!3.57e-20!39;UBERON:0001890!3.57e-20!39;UBERON:0006240!3.57e-20!39;UBERON:0002020!4.61e-20!34;UBERON:0002791!1.87e-17!29;UBERON:0003528!1.87e-17!29;UBERON:0001893!1.87e-17!29;UBERON:0000956!1.44e-12!21;UBERON:0001869!1.44e-12!21;UBERON:0000203!1.44e-12!21;UBERON:0000153!1.64e-11!94;UBERON:0007811!6.09e-11!86;UBERON:0002619!3.44e-10!17;UBERON:0002021!3.61e-08!10;UBERON:0000411!3.61e-08!10;UBERON:0001950!3.61e-08!10 | |ontology_enrichment_uberon=UBERON:0001017!8.80e-28!73;UBERON:0005743!8.80e-28!73;UBERON:0000073!2.90e-27!75;UBERON:0001016!2.90e-27!75;UBERON:0002346!5.68e-26!71;UBERON:0003075!5.68e-26!71;UBERON:0007284!5.68e-26!71;UBERON:0001049!2.16e-24!52;UBERON:0005068!2.16e-24!52;UBERON:0006241!2.16e-24!52;UBERON:0007135!2.16e-24!52;UBERON:0004121!1.16e-23!102;UBERON:0000924!1.16e-23!102;UBERON:0006601!1.16e-23!102;UBERON:0000955!1.66e-23!50;UBERON:0006238!1.66e-23!50;UBERON:0002616!7.26e-23!49;UBERON:0000033!4.77e-22!63;UBERON:0003080!6.66e-21!40;UBERON:0003056!7.51e-21!49;UBERON:0002780!3.57e-20!39;UBERON:0001890!3.57e-20!39;UBERON:0006240!3.57e-20!39;UBERON:0002020!4.61e-20!34;UBERON:0002791!1.87e-17!29;UBERON:0003528!1.87e-17!29;UBERON:0001893!1.87e-17!29;UBERON:0000956!1.44e-12!21;UBERON:0001869!1.44e-12!21;UBERON:0000203!1.44e-12!21;UBERON:0000153!1.64e-11!94;UBERON:0007811!6.09e-11!86;UBERON:0002619!3.44e-10!17;UBERON:0002021!3.61e-08!10;UBERON:0000411!3.61e-08!10;UBERON:0001950!3.61e-08!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.02e-31,54;UBERON:0001017,7.27e-30,73;UBERON:0001049,2.61e-29,52;UBERON:0005068,2.61e-29,52;UBERON:0006241,2.61e-29,52;UBERON:0007135,2.61e-29,52;UBERON:0001016,2.19e-28,75;UBERON:0002346,8.09e-28,64;UBERON:0003075,8.09e-28,64;UBERON:0007284,8.09e-28,64;UBERON:0000955,8.56e-26,47;UBERON:0006238,8.56e-26,47;UBERON:0002616,5.24e-25,46;UBERON:0003080,3.77e-24,40;UBERON:0002020,7.27e-24,34;UBERON:0002780,3.04e-23,39;UBERON:0001890,3.04e-23,39;UBERON:0006240,3.04e-23,39;UBERON:0010371,2.02e-22,73;UBERON:0004121,1.23e-21,95;UBERON:0000924,1.23e-21,95;UBERON:0006601,1.23e-21,95;UBERON:0003056,2.23e-21,49;UBERON:0003528,1.41e-20,29;UBERON:0002791,1.41e-20,29;UBERON:0001893,1.41e-20,29;UBERON:0010314,7.08e-18,92;UBERON:0000956,1.90e-14,21;UBERON:0001869,1.90e-14,21;UBERON:0000203,1.90e-14,21;UBERON:0002619,1.79e-11,17;UBERON:0002021,6.83e-10,10;UBERON:0000411,6.83e-10,10;UBERON:0001950,6.83e-10,10;UBERON:0002420,2.56e-07,8;UBERON:0007245,2.56e-07,8;UBERON:0010009,2.56e-07,8;UBERON:0010011,2.56e-07,8;UBERON:0000454,2.56e-07,8 | |||
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,4.59233766815777,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.388859798148567,0.139986421625363,1.43752564364972,0,0,0,0.514518872071894,0,0,7.89034197352431,10.0508286061686,7.60597684207415,0,0,0,0,0,0.299600110518405,0,13.1685807631767,14.850653216486,13.8814474491912,7.42692559449889,7.50953039235486,18.3736198822431,14.8560480078266,16.5459381589804,12.1127469099328,13.6625451751151,17.2039317246993,6.19865552331911,6.12967212136145,5.2091337055676,18.7052609330925,19.6966913511088,18.0301932376636,7.95497180778903,9.5389026135399,9.87917062874093,0.075726193333184,0.755715601067855,0,0,0,0,0,0,1.12355536105401,0,0,0,1.40843419776681,0,0,0,0,0,0,0.68510327831436,0,1.1875371125186,1.73485326766136,1.21786191324856,1.61430848079241,0.753613202763113,0.705532242814229,0.753999547978053,0.247194967734374,0,0,0.161766849947409,0,0.484875253135222,0,4.68449275218475,5.44561437714983,0,0.11981512450592,0,0,19.3229924832221,15.5550204958333,31.6648967324418,19.468323861535,15.3429274398198,12.4672826735736,15.412919991437,0.81471491080253,0,0.505445516867349,0.841767423545896,1.30120442962704,0.689706313300419,1.44049703844279,0.753524089178575,0.544291993210623,1.15302348256365,1.12442069471675,3.88055056108524,0.646703978798527,1.70195472151037,1.23165786914764,1.97276159184817,1.11218899690239,1.39300866608867,0.823128545631774,1.19420560091096,0,0,0,1.44988040774851,1.64168241986767,0.900310307305074,1.18372367792605,0.196764231747404,0.462801338662135,0.232533944750408,0.268273401399619,0.467061369468678,0,0,0,0,0,0,23.131894342054,15.2298826321341,0,0.264450566663544,2.13288250535234,1.39342003116263,1.15980715189884,0,0,0.190225626112559,0,0.164698954724011,0,0,0.19496408711912,0,0.216138049874694,0,1.32767530667157,0.571242563048644,0,0.610953983535943,0.581857461502877,0.420814919341911,0.316182685621286,0,0,0,0,0.333690211432188,0.589676985339609,0.224862112384854,0.405720242777006,0,0.763877555344259,0.287696137450811,0.162135226775035,0,0,0,0.936113019343682,0,0,0,0,1.32643988239339,0.814824882210129,0.509235257325564,0.469380496577004,0.167506257441816,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0.275936746304732,13.8073507389501,15.8235776899474,0,0,2.2085575359138,1.17131623288992,2.80050417052639,0.477937595905104,0.891194696329576,0.566153061577665,4.04810701674894,1.16902343164525,0.395287777946524,14.1381379225595,0,1.95872164033981,1.30309567482861,0.329940245945071,0,1.69946445308487,0.604647113929502,0.565815239267694,0.590603785761546,0.922305443831782,0.775284879504663,0.363533729477506,0,0.316036757935816,0,0,5.7874732978144,0.720244376125241,1.03486947026204,1.50035924522115,3.90148514013002,1.96205699362278,2.63278432963394,2.74018454203139,0.23467170806371,0,0.441056796109924,0,0.322928853391811,0.0603129249281559,0,0,0,14.4631735568198,0,0.412773735926445,0.370389054739423,0,0,0,0,0,0,0,3.00519193902079,0.609958401380546,0.108005340821801,0.209088296014469,0.655087691238533,0.269728692769641,0.330613822901344,0,0.129614973291793,0,13.5286305284206,1.49516546043979,1.98550188548517,3.88902376688095,3.48731523389874,2.53434188236167,1.05621514781179,0.39061315453185,2.51662426621706,5.07326653734613,8.06484017522023,0,1.41907650703115,0,0.25984164595559,0.358053391334963,0.198681354781265,0,0,0.100966449948148,0,0,0.0974578807397524,0,0.233753804363138,0,1.10992976687032,0.269141569828427,1.00730769818447,0,0,0,0,0,16.3778034358949,20.714635642823,13.1765968091061,22.3409137046794,20.5524755931193,19.6402413321322,19.5756525067224,16.2115633160719,21.7508356312418,18.1216109113137,1.97195960409936,0.798049746802062,2.56100408631201,2.43106717068294,4.40187641518763,4.04455718590031,3.77819437262746,2.06035057238894,0.64183841918363,2.27427490587418,3.54871019846336,1.50901073108861,1.96647165686753,1.98477972455095,1.7230640686684,0.476293691283074,1.50649623728312,1.92909220463705,2.47251540481984,1.17759136107518,2.05721551431249,3.19456451086807,2.14592570952589,3.0522747492789,2.1645157495526,2.11536519729191,3.47563148458268,1.8414879800649,2.44447404922551,3.92799590160417,2.25406534435931,3.05363895364247,2.86461730218783,2.01417893541756,2.12197272079256,4.99621155875892,2.10538447600868,1.50409737833809,0.57386499620653,1.10295709559758,1.39120701372253 | |phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,4.59233766815777,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.388859798148567,0.139986421625363,1.43752564364972,0,0,0,0.514518872071894,0,0,7.89034197352431,10.0508286061686,7.60597684207415,0,0,0,0,0,0.299600110518405,0,13.1685807631767,14.850653216486,13.8814474491912,7.42692559449889,7.50953039235486,18.3736198822431,14.8560480078266,16.5459381589804,12.1127469099328,13.6625451751151,17.2039317246993,6.19865552331911,6.12967212136145,5.2091337055676,18.7052609330925,19.6966913511088,18.0301932376636,7.95497180778903,9.5389026135399,9.87917062874093,0.075726193333184,0.755715601067855,0,0,0,0,0,0,1.12355536105401,0,0,0,1.40843419776681,0,0,0,0,0,0,0.68510327831436,0,1.1875371125186,1.73485326766136,1.21786191324856,1.61430848079241,0.753613202763113,0.705532242814229,0.753999547978053,0.247194967734374,0,0,0.161766849947409,0,0.484875253135222,0,4.68449275218475,5.44561437714983,0,0.11981512450592,0,0,19.3229924832221,15.5550204958333,31.6648967324418,19.468323861535,15.3429274398198,12.4672826735736,15.412919991437,0.81471491080253,0,0.505445516867349,0.841767423545896,1.30120442962704,0.689706313300419,1.44049703844279,0.753524089178575,0.544291993210623,1.15302348256365,1.12442069471675,3.88055056108524,0.646703978798527,1.70195472151037,1.23165786914764,1.97276159184817,1.11218899690239,1.39300866608867,0.823128545631774,1.19420560091096,0,0,0,1.44988040774851,1.64168241986767,0.900310307305074,1.18372367792605,0.196764231747404,0.462801338662135,0.232533944750408,0.268273401399619,0.467061369468678,0,0,0,0,0,0,23.131894342054,15.2298826321341,0,0.264450566663544,2.13288250535234,1.39342003116263,1.15980715189884,0,0,0.190225626112559,0,0.164698954724011,0,0,0.19496408711912,0,0.216138049874694,0,1.32767530667157,0.571242563048644,0,0.610953983535943,0.581857461502877,0.420814919341911,0.316182685621286,0,0,0,0,0.333690211432188,0.589676985339609,0.224862112384854,0.405720242777006,0,0.763877555344259,0.287696137450811,0.162135226775035,0,0,0,0.936113019343682,0,0,0,0,1.32643988239339,0.814824882210129,0.509235257325564,0.469380496577004,0.167506257441816,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0.275936746304732,13.8073507389501,15.8235776899474,0,0,2.2085575359138,1.17131623288992,2.80050417052639,0.477937595905104,0.891194696329576,0.566153061577665,4.04810701674894,1.16902343164525,0.395287777946524,14.1381379225595,0,1.95872164033981,1.30309567482861,0.329940245945071,0,1.69946445308487,0.604647113929502,0.565815239267694,0.590603785761546,0.922305443831782,0.775284879504663,0.363533729477506,0,0.316036757935816,0,0,5.7874732978144,0.720244376125241,1.03486947026204,1.50035924522115,3.90148514013002,1.96205699362278,2.63278432963394,2.74018454203139,0.23467170806371,0,0.441056796109924,0,0.322928853391811,0.0603129249281559,0,0,0,14.4631735568198,0,0.412773735926445,0.370389054739423,0,0,0,0,0,0,0,3.00519193902079,0.609958401380546,0.108005340821801,0.209088296014469,0.655087691238533,0.269728692769641,0.330613822901344,0,0.129614973291793,0,13.5286305284206,1.49516546043979,1.98550188548517,3.88902376688095,3.48731523389874,2.53434188236167,1.05621514781179,0.39061315453185,2.51662426621706,5.07326653734613,8.06484017522023,0,1.41907650703115,0,0.25984164595559,0.358053391334963,0.198681354781265,0,0,0.100966449948148,0,0,0.0974578807397524,0,0.233753804363138,0,1.10992976687032,0.269141569828427,1.00730769818447,0,0,0,0,0,16.3778034358949,20.714635642823,13.1765968091061,22.3409137046794,20.5524755931193,19.6402413321322,19.5756525067224,16.2115633160719,21.7508356312418,18.1216109113137,1.97195960409936,0.798049746802062,2.56100408631201,2.43106717068294,4.40187641518763,4.04455718590031,3.77819437262746,2.06035057238894,0.64183841918363,2.27427490587418,3.54871019846336,1.50901073108861,1.96647165686753,1.98477972455095,1.7230640686684,0.476293691283074,1.50649623728312,1.92909220463705,2.47251540481984,1.17759136107518,2.05721551431249,3.19456451086807,2.14592570952589,3.0522747492789,2.1645157495526,2.11536519729191,3.47563148458268,1.8414879800649,2.44447404922551,3.92799590160417,2.25406534435931,3.05363895364247,2.86461730218783,2.01417893541756,2.12197272079256,4.99621155875892,2.10538447600868,1.50409737833809,0.57386499620653,1.10295709559758,1.39120701372253 | ||
|short_description=p2@Ddx25 | |short_description=p2@Ddx25 | ||
}} | }} |
Latest revision as of 14:15, 26 September 2015
Short description: | p2@Ddx25 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ddx25_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -52bp_to_ENSMUST00000034612, NM_013932, uc012gqi.1_5end |
EntrezGene: | Ddx25 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.95e-17 | 23 |
neuroblast (sensu Vertebrata) | 3.95e-17 | 23 |
neuron | 1.07e-13 | 33 |
neuronal stem cell | 1.07e-13 | 33 |
neuroblast | 1.07e-13 | 33 |
electrically signaling cell | 1.07e-13 | 33 |
electrically responsive cell | 6.32e-10 | 39 |
electrically active cell | 6.32e-10 | 39 |
ectodermal cell | 7.03e-09 | 44 |
neurectodermal cell | 7.03e-09 | 44 |
neural cell | 1.09e-08 | 43 |