FFCP PHASE1:Mm9::chr15:85166831..85166847,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=54138 | |EntrezGene=54138 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3016 | |MCL_coexpression_id=3016 | ||
|TSSclassifier=NA | |||
|UniProt=P28658 | |UniProt=P28658 | ||
|association_with_transcript=20bp_to_ENSMUST00000163242,NM_016843,uc007xdd.1_5end | |association_with_transcript=20bp_to_ENSMUST00000163242,NM_016843,uc007xdd.1_5end | ||
|cluster_id=chr15:85166831..85166847,+ | |||
|description=CAGE_peak_4_at_Atxn10_5end | |description=CAGE_peak_4_at_Atxn10_5end | ||
|id=chr15:85166831..85166847,+ | |id=chr15:85166831..85166847,+ | ||
|ontology_enrichment_celltype=CL:0000393!9.36e-09!39;CL:0000211!9.36e-09!39;CL:0000221!3.42e-08!44;CL:0000133!3.42e-08!44;CL:0000055!4.03e-08!50;CL:0000540!4.18e-08!33;CL:0000047!4.18e-08!33;CL:0000031!4.18e-08!33;CL:0000404!4.18e-08!33;CL:0002319!4.32e-08!43 | |ontology_enrichment_celltype=CL:0000393!9.36e-09!39;CL:0000211!9.36e-09!39;CL:0000221!3.42e-08!44;CL:0000133!3.42e-08!44;CL:0000055!4.03e-08!50;CL:0000540!4.18e-08!33;CL:0000047!4.18e-08!33;CL:0000031!4.18e-08!33;CL:0000404!4.18e-08!33;CL:0002319!4.32e-08!43 | ||
|ontology_enrichment_celltype_v019_2=CL:0000393,9.30e-09,39;CL:0000211,9.30e-09,39;CL:0000221,3.40e-08,44;CL:0000133,3.40e-08,44;CL:0000540,4.16e-08,33;CL:0000047,4.16e-08,33;CL:0000031,4.16e-08,33;CL:0000404,4.16e-08,33;CL:0002319,4.29e-08,43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.28e-16!75;UBERON:0001016!1.28e-16!75;UBERON:0001017!2.09e-15!73;UBERON:0005743!2.09e-15!73;UBERON:0004121!3.69e-12!102;UBERON:0000924!3.69e-12!102;UBERON:0006601!3.69e-12!102;UBERON:0001049!2.12e-11!52;UBERON:0005068!2.12e-11!52;UBERON:0006241!2.12e-11!52;UBERON:0007135!2.12e-11!52;UBERON:0000955!6.10e-11!50;UBERON:0006238!6.10e-11!50;UBERON:0002616!1.61e-10!49;UBERON:0002346!2.28e-10!71;UBERON:0003075!2.28e-10!71;UBERON:0007284!2.28e-10!71;UBERON:0002020!1.00e-09!34;UBERON:0000033!1.83e-09!63;UBERON:0007811!2.17e-09!86;UBERON:0003080!8.68e-09!40;UBERON:0000153!9.47e-09!94;UBERON:0002780!2.25e-08!39;UBERON:0001890!2.25e-08!39;UBERON:0006240!2.25e-08!39;UBERON:0003056!5.89e-08!49;UBERON:0002791!6.71e-08!29;UBERON:0003528!6.71e-08!29;UBERON:0001893!6.71e-08!29 | |ontology_enrichment_uberon=UBERON:0000073!1.28e-16!75;UBERON:0001016!1.28e-16!75;UBERON:0001017!2.09e-15!73;UBERON:0005743!2.09e-15!73;UBERON:0004121!3.69e-12!102;UBERON:0000924!3.69e-12!102;UBERON:0006601!3.69e-12!102;UBERON:0001049!2.12e-11!52;UBERON:0005068!2.12e-11!52;UBERON:0006241!2.12e-11!52;UBERON:0007135!2.12e-11!52;UBERON:0000955!6.10e-11!50;UBERON:0006238!6.10e-11!50;UBERON:0002616!1.61e-10!49;UBERON:0002346!2.28e-10!71;UBERON:0003075!2.28e-10!71;UBERON:0007284!2.28e-10!71;UBERON:0002020!1.00e-09!34;UBERON:0000033!1.83e-09!63;UBERON:0007811!2.17e-09!86;UBERON:0003080!8.68e-09!40;UBERON:0000153!9.47e-09!94;UBERON:0002780!2.25e-08!39;UBERON:0001890!2.25e-08!39;UBERON:0006240!2.25e-08!39;UBERON:0003056!5.89e-08!49;UBERON:0002791!6.71e-08!29;UBERON:0003528!6.71e-08!29;UBERON:0001893!6.71e-08!29 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.26e-16,75;UBERON:0001017,2.07e-15,73;UBERON:0004121,1.17e-12,95;UBERON:0000924,1.17e-12,95;UBERON:0006601,1.17e-12,95;UBERON:0000073,2.13e-12,54;UBERON:0001049,2.10e-11,52;UBERON:0005068,2.10e-11,52;UBERON:0006241,2.10e-11,52;UBERON:0007135,2.10e-11,52;UBERON:0002346,3.88e-11,64;UBERON:0003075,3.88e-11,64;UBERON:0007284,3.88e-11,64;UBERON:0002020,9.94e-10,34;UBERON:0000955,1.79e-09,47;UBERON:0006238,1.79e-09,47;UBERON:0002616,4.55e-09,46;UBERON:0003080,8.63e-09,40;UBERON:0010371,9.92e-09,73;UBERON:0010314,1.08e-08,92;UBERON:0002780,2.23e-08,39;UBERON:0001890,2.23e-08,39;UBERON:0006240,2.23e-08,39;UBERON:0003056,5.86e-08,49;UBERON:0003528,6.67e-08,29;UBERON:0002791,6.67e-08,29;UBERON:0001893,6.67e-08,29 | |||
|phase1_expression=8.48788889655408,0,0.454999239389536,0,0,1.00727563147134,1.63528848416868,4.9066862907799,5.34997144176334,6.78787126333781,2.05461561870606,2.71225340584144,3.76641605848653,3.58423649917889,0.999329285446988,0.809901069559304,1.39912375625629,3.3123527362615,2.33094537129756,1.69755860719212,3.06155844543851,14.9929336313337,17.7615856614476,2.55987876469451,1.83527424853736,0,0.86152399231815,0.861884930743556,0.190023419456374,1.00812051903972,1.99557459589774,1.27006134691926,3.69038872550742,15.8481681015439,0.577703239502549,0.664938581433969,0.612508068787107,44.3643528581122,46.880120671428,30.3643771504803,71.1760100517527,43.0318655523821,26.7030694167134,5.28766635497425,5.5757312170733,9.17733760808408,4.69434806608824,4.36050312760893,10.3252505885202,5.8328969722285,4.75953833526233,10.062679505548,2.68452169692378,5.07753499407941,7.39406358113421,13.6347501099052,10.601737277734,7.21940929188419,7.48570905180512,5.28990979272033,10.1413024560989,9.82649143000483,3.55717918444456,3.1496490104849,0.988866362566974,1.4209602298922,3.29560121570245,4.61061966385865,6.53244557543409,6.61529097825284,6.94072372459561,12.2829923293636,13.693849539,6.36952155917761,5.55903731905771,4.5960939330501,20.9220173898839,17.8762273319263,18.7399970572617,8.83638127792299,9.78917786545783,9.37644067002168,22.8930059181132,16.3201156909187,16.0438160165651,13.5529149317887,11.6744778255264,13.4207600994216,31.5020964266046,31.0599112038888,3.47837386442013,0.860423876981386,2.03991400112325,1.07940638327563,1.29955283489534,1.34408066129201,1.68533304158102,8.01022516116871,10.9110121933205,9.54016851177919,7.74638808771743,3.84979432242953,0,28.4426681261332,16.4533191168523,10.1343946190039,18.704404465547,1.59857431606684,2.07150306917737,3.85949561568544,6.93941307064543,6.08930956624282,5.76538743140146,5.42601505989441,9.05433044944927,1.50799909595611,59.0795972885154,1.01219549843938,2.65383165584962,5.50007289821191,1.98757366614354,1.93950101254089,0,4.09893115816166,8.16842156572475,1.02182822083437,18.2118989248999,17.3971791988088,16.7732699736445,15.8778077769112,8.23501085073528,7.53926112677186,13.5582969749976,10.4843337505436,19.5320761885986,19.4689515681309,8.1471491080253,3.98102305952298,4.29628689337247,1.26265113531884,7.67710613479952,7.12696523743766,5.22180176435513,4.52114453507145,8.64063539221864,7.17436833595159,5.99691037182265,5.17406741478031,10.3472636607764,6.99692496620931,4.39877810409872,8.11024209982027,5.83899223373756,4.179025998266,2.05782136407943,6.76716507182877,9.83098462238529,11.5806558201622,13.0715209721973,12.6346721246656,8.20841209933837,9.36322719597277,7.10234206755631,5.1158700254325,5.39934895105824,5.8133486187602,4.82892122519315,5.13767506415546,2.30383789878873,2.79084688934462,2.99954595319666,1.60819986167866,1.09775057645525,1.34206418760372,14.2997165023607,17.1850702673405,0,1.05780226665418,8.10495352033889,7.89604684325491,6.82997545007095,4.84040459096022,3.11329261382818,3.80451252225118,1.42358718463353,4.44687177754829,3.51869292320377,4.17808591286417,4.09424582950152,0,0.864552199498777,0.597423819763102,16.1217715810119,6.39791670614481,7.88954149711563,6.10953983535943,3.10323979468201,9.32806404541237,4.48979413582227,0.885660887877613,1.8839847340965,1.72756029490521,1.1858105083486,3.17005700860579,4.32429789249047,3.37293168577281,4.46292267054706,5.06472035480075,4.83789118384698,4.02774592431135,14.4300351829781,3.0201755450689,7.18841032636773,5.58211421502755,1.5601883655728,1.01031551178845,1.07638448113147,1.92977408545347,4.80358294433172,11.7484675297701,10.5927234687317,8.31750920298422,8.91822943496308,6.86775655511445,5.47500374037832,11.5128852236101,8.98520321405289,10.4088404134924,7.01600982092943,4.7520361267564,5.35323443784276,7.37710198765709,3.01582567878545,5.98296252200581,0.983528546038072,4.13905119457099,29.8624097377293,21.332526959781,16.0656246469142,1.51482556322624,10.0962630213202,7.41833614163613,9.47862950024315,10.2756583119597,9.80314165962534,9.05844898524264,8.50102473517278,10.5212108848072,13.0444966722353,15.7447445046685,2.98074178937364,6.23229612835393,7.81857404897165,2.47455184458803,1.32745138339963,12.3818124439041,7.25576536715402,4.90373207365335,5.02013217897314,4.61152721915891,7.75284879504663,10.1789444253702,4.9909632973861,1.26414703174326,1.05418608574999,1.03135543248187,5.44703369206061,7.56256594931503,6.07985813778946,4.92975180572662,4.25616560741457,5.70780216326626,5.43011767986999,14.9187825066154,28.8646200918364,55.5000025663209,3.74898276693435,0.49465875882444,6.78150592122803,3.01564624640779,3.46179797609096,3.28281799490123,4.95517422270746,26.1449675834819,0.854354403989263,8.2554747185289,4.44466865687308,2.44878994106098,1.23024804948923,0.457556346413045,16.6578861393978,17.4939315404573,14.5109972494645,0,8.22473583310952,5.08298667817122,4.10420295122845,2.92723614420256,3.49380101993884,3.77620169877498,4.95920734352016,1.047023767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|phase1_expression=8.48788889655408,0,0.454999239389536,0,0,1.00727563147134,1.63528848416868,4.9066862907799,5.34997144176334,6.78787126333781,2.05461561870606,2.71225340584144,3.76641605848653,3.58423649917889,0.999329285446988,0.809901069559304,1.39912375625629,3.3123527362615,2.33094537129756,1.69755860719212,3.06155844543851,14.9929336313337,17.7615856614476,2.55987876469451,1.83527424853736,0,0.86152399231815,0.861884930743556,0.190023419456374,1.00812051903972,1.99557459589774,1.27006134691926,3.69038872550742,15.8481681015439,0.577703239502549,0.664938581433969,0.612508068787107,44.3643528581122,46.880120671428,30.3643771504803,71.1760100517527,43.0318655523821,26.7030694167134,5.28766635497425,5.5757312170733,9.17733760808408,4.69434806608824,4.36050312760893,10.3252505885202,5.8328969722285,4.75953833526233,10.062679505548,2.68452169692378,5.07753499407941,7.39406358113421,13.6347501099052,10.601737277734,7.21940929188419,7.48570905180512,5.28990979272033,10.1413024560989,9.82649143000483,3.55717918444456,3.1496490104849,0.988866362566974,1.4209602298922,3.29560121570245,4.61061966385865,6.53244557543409,6.61529097825284,6.94072372459561,12.2829923293636,13.693849539,6.36952155917761,5.55903731905771,4.5960939330501,20.9220173898839,17.8762273319263,18.7399970572617,8.83638127792299,9.78917786545783,9.37644067002168,22.8930059181132,16.3201156909187,16.0438160165651,13.5529149317887,11.6744778255264,13.4207600994216,31.5020964266046,31.0599112038888,3.47837386442013,0.860423876981386,2.03991400112325,1.07940638327563,1.29955283489534,1.34408066129201,1.68533304158102,8.01022516116871,10.9110121933205,9.54016851177919,7.74638808771743,3.84979432242953,0,28.4426681261332,16.4533191168523,10.1343946190039,18.704404465547,1.59857431606684,2.07150306917737,3.85949561568544,6.93941307064543,6.08930956624282,5.76538743140146,5.42601505989441,9.05433044944927,1.50799909595611,59.0795972885154,1.01219549843938,2.65383165584962,5.50007289821191,1.98757366614354,1.93950101254089,0,4.09893115816166,8.16842156572475,1.02182822083437,18.2118989248999,17.3971791988088,16.7732699736445,15.8778077769112,8.23501085073528,7.53926112677186,13.5582969749976,10.4843337505436,19.5320761885986,19.4689515681309,8.1471491080253,3.98102305952298,4.29628689337247,1.26265113531884,7.67710613479952,7.12696523743766,5.22180176435513,4.52114453507145,8.64063539221864,7.17436833595159,5.99691037182265,5.17406741478031,10.3472636607764,6.99692496620931,4.39877810409872,8.11024209982027,5.83899223373756,4.179025998266,2.05782136407943,6.76716507182877,9.83098462238529,11.5806558201622,13.0715209721973,12.6346721246656,8.20841209933837,9.36322719597277,7.10234206755631,5.1158700254325,5.39934895105824,5.8133486187602,4.82892122519315,5.13767506415546,2.30383789878873,2.79084688934462,2.99954595319666,1.60819986167866,1.09775057645525,1.34206418760372,14.2997165023607,17.1850702673405,0,1.05780226665418,8.10495352033889,7.89604684325491,6.82997545007095,4.84040459096022,3.11329261382818,3.80451252225118,1.42358718463353,4.44687177754829,3.51869292320377,4.17808591286417,4.09424582950152,0,0.864552199498777,0.597423819763102,16.1217715810119,6.39791670614481,7.88954149711563,6.10953983535943,3.10323979468201,9.32806404541237,4.48979413582227,0.885660887877613,1.8839847340965,1.72756029490521,1.1858105083486,3.17005700860579,4.32429789249047,3.37293168577281,4.46292267054706,5.06472035480075,4.83789118384698,4.02774592431135,14.4300351829781,3.0201755450689,7.18841032636773,5.58211421502755,1.5601883655728,1.01031551178845,1.07638448113147,1.92977408545347,4.80358294433172,11.7484675297701,10.5927234687317,8.31750920298422,8.91822943496308,6.86775655511445,5.47500374037832,11.5128852236101,8.98520321405289,10.4088404134924,7.01600982092943,4.7520361267564,5.35323443784276,7.37710198765709,3.01582567878545,5.98296252200581,0.983528546038072,4.13905119457099,29.8624097377293,21.332526959781,16.0656246469142,1.51482556322624,10.0962630213202,7.41833614163613,9.47862950024315,10.2756583119597,9.80314165962534,9.05844898524264,8.50102473517278,10.5212108848072,13.0444966722353,15.7447445046685,2.98074178937364,6.23229612835393,7.81857404897165,2.47455184458803,1.32745138339963,12.3818124439041,7.25576536715402,4.90373207365335,5.02013217897314,4.61152721915891,7.75284879504663,10.1789444253702,4.9909632973861,1.26414703174326,1.05418608574999,1.03135543248187,5.44703369206061,7.56256594931503,6.07985813778946,4.92975180572662,4.25616560741457,5.70780216326626,5.43011767986999,14.9187825066154,28.8646200918364,55.5000025663209,3.74898276693435,0.49465875882444,6.78150592122803,3.01564624640779,3.46179797609096,3.28281799490123,4.95517422270746,26.1449675834819,0.854354403989263,8.2554747185289,4.44466865687308,2.44878994106098,1.23024804948923,0.457556346413045,16.6578861393978,17.4939315404573,14.5109972494645,0,8.22473583310952,5.08298667817122,4.10420295122845,2.92723614420256,3.49380101993884,3.77620169877498,4.95920734352016,1.047023767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| ||
|short_description=p4@Atxn10 | |short_description=p4@Atxn10 | ||
}} | }} |
Latest revision as of 06:16, 27 September 2015
Short description: | p4@Atxn10 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Atxn10_5end |
Coexpression cluster: | MCL_coexpression_mm9:3016 |
Association with transcript: | 20bp_to_ENSMUST00000163242, NM_016843, uc007xdd.1_5end |
EntrezGene: | Atxn10 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 9.30e-09 | 39 |
electrically active cell | 9.30e-09 | 39 |
ectodermal cell | 3.40e-08 | 44 |
neurectodermal cell | 3.40e-08 | 44 |
neuron | 4.16e-08 | 33 |
neuronal stem cell | 4.16e-08 | 33 |
neuroblast | 4.16e-08 | 33 |
electrically signaling cell | 4.16e-08 | 33 |
neural cell | 4.29e-08 | 43 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.26e-16 | 75 |
central nervous system | 2.07e-15 | 73 |
ectoderm-derived structure | 1.17e-12 | 95 |
ectoderm | 1.17e-12 | 95 |
presumptive ectoderm | 1.17e-12 | 95 |
regional part of nervous system | 2.13e-12 | 54 |
neural tube | 2.10e-11 | 52 |
neural rod | 2.10e-11 | 52 |
future spinal cord | 2.10e-11 | 52 |
neural keel | 2.10e-11 | 52 |
neurectoderm | 3.88e-11 | 64 |
neural plate | 3.88e-11 | 64 |
presumptive neural plate | 3.88e-11 | 64 |
gray matter | 9.94e-10 | 34 |
brain | 1.79e-09 | 47 |
future brain | 1.79e-09 | 47 |
regional part of brain | 4.55e-09 | 46 |
anterior neural tube | 8.63e-09 | 40 |
ecto-epithelium | 9.92e-09 | 73 |
structure with developmental contribution from neural crest | 1.08e-08 | 92 |
regional part of forebrain | 2.23e-08 | 39 |
forebrain | 2.23e-08 | 39 |
future forebrain | 2.23e-08 | 39 |
pre-chordal neural plate | 5.86e-08 | 49 |
brain grey matter | 6.67e-08 | 29 |
regional part of telencephalon | 6.67e-08 | 29 |
telencephalon | 6.67e-08 | 29 |