FFCP PHASE1:Mm9::chr10:116729919..116729926,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=17110 | |EntrezGene=17110 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1008 | |MCL_coexpression_id=1008 | ||
|TSSclassifier=NA | |||
|UniProt=P17897,P08905 | |UniProt=P17897,P08905 | ||
|association_with_transcript=0bp_to_ENSMUST00000092162,NM_013590,uc007hdc.2_5end | |association_with_transcript=0bp_to_ENSMUST00000092162,NM_013590,uc007hdc.2_5end | ||
|cluster_id=chr10:116729919..116729926,- | |||
|description=CAGE_peak_1_at_Lyz1_5end | |description=CAGE_peak_1_at_Lyz1_5end | ||
|id=chr10:116729919..116729926,- | |id=chr10:116729919..116729926,- | ||
|ontology_enrichment_celltype=CL:0002563!2.73e-07!9;CL:0002251!2.73e-07!9 | |ontology_enrichment_celltype=CL:0002563!2.73e-07!9;CL:0002251!2.73e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.54e-11,9;CL:0002251,1.54e-11,9;CL:0000239,2.78e-08,6;CL:0000677,2.78e-08,6;CL:0000584,2.78e-08,6;CL:0000075,5.86e-07,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!6.78e-12!15;UBERON:0001242!2.94e-10!13;UBERON:0000060!2.94e-10!13;UBERON:0001262!2.94e-10!13;UBERON:0004786!2.94e-10!13;UBERON:0004923!3.11e-09!24;UBERON:0000160!3.70e-09!43;UBERON:0003350!2.73e-07!9;UBERON:0004808!2.73e-07!9;UBERON:0001277!2.73e-07!9;UBERON:0005409!3.74e-07!59;UBERON:0001007!8.35e-07!128;UBERON:0001555!8.35e-07!128;UBERON:0007026!8.35e-07!128 | |ontology_enrichment_uberon=UBERON:0000344!6.78e-12!15;UBERON:0001242!2.94e-10!13;UBERON:0000060!2.94e-10!13;UBERON:0001262!2.94e-10!13;UBERON:0004786!2.94e-10!13;UBERON:0004923!3.11e-09!24;UBERON:0000160!3.70e-09!43;UBERON:0003350!2.73e-07!9;UBERON:0004808!2.73e-07!9;UBERON:0001277!2.73e-07!9;UBERON:0005409!3.74e-07!59;UBERON:0001007!8.35e-07!128;UBERON:0001555!8.35e-07!128;UBERON:0007026!8.35e-07!128 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.73e-20,31;UBERON:0000344,1.52e-19,15;UBERON:0001242,1.08e-16,13;UBERON:0001262,1.08e-16,13;UBERON:0004786,1.08e-16,13;UBERON:0003350,1.54e-11,9;UBERON:0004808,1.54e-11,9;UBERON:0001277,1.54e-11,9;UBERON:0005409,8.96e-11,47;UBERON:0004923,1.47e-10,24;UBERON:0000485,4.67e-09,11;UBERON:0002048,2.93e-08,14;UBERON:0000117,2.93e-08,14;UBERON:0000171,2.93e-08,14;UBERON:0000170,2.93e-08,14;UBERON:0005597,2.93e-08,14;UBERON:0000118,2.93e-08,14;UBERON:0001007,4.56e-08,116;UBERON:0001555,4.56e-08,116;UBERON:0007026,4.56e-08,116;UBERON:0004119,9.14e-08,118;UBERON:0000925,9.14e-08,118;UBERON:0006595,9.14e-08,118;UBERON:0005153,1.28e-07,17;UBERON:0002108,4.86e-07,4;UBERON:0004921,7.17e-07,114 | |||
|phase1_expression=0,10.4692622291808,6.82498859084304,13.9133537201142,27.0483694171027,42.4734557937081,182.685084945701,0.129123323441576,0,0,0,0,0,0,0,0,0,2.05050407482854,2.19383093769182,2.54633791078818,3.40173160604279,0,0,106.234968734822,88.7813917729948,15.5042630311055,47.3838195774982,75.6304026727471,394.108571952519,90.982876843335,48.5589818335117,0,0,15.8481681015439,6.64358725427932,60.1769416197742,11.637653306955,18.8339233831608,28.9094077473806,31.9349483824017,54.1172968988533,37.5675016727145,46.6089938909907,0,0,0,0,0,0,0,0.139986421625363,0,0.335565212115473,0,0,0,0,0,0,0,0,0,0,3.1496490104849,1.97773272513395,4.2628806896766,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0.860423876981386,0,0,0,0,14.0444420131752,0,0,0,0,0,0,0,0,0,0,47.5004939631289,4.14300613835475,0.148442139064825,0,0,0,0.150722640552623,0,0.376999773989026,0,1.3013942122792,4.42305275974937,0.161766849947409,0.220841518460394,0,5.59175283654366,0,0,369.390901831623,0.239630249011841,1.79970819298022,0.381210681219194,0,0,0,0,0,0,0,0,0.746441823660558,0.252722758433675,0.631325567659422,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,1.02939162845886,0,0.207125772535502,0,0,0.23674473558521,0,0,0,0,0,0,0.164167464079095,0,0,0.439100230582101,0.134206418760372,0,0,5.28670052774077,159.992592831444,0,0,0,0.201683524623343,0.22237804384487,0.380451252225118,74.5010626624883,0.494096864172033,1.25667604400135,0.596869416123452,2.53453313254856,76.3996497356088,118.011375231583,154.732769318643,0.189667900953082,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0.202860121388503,0,0,0.575392274901621,0,0.274561413188081,0,2.23284568601102,0,0.252578877947112,0,0,14.4107488329952,0,0,0,0.469380496577004,3.35012514883632,30.4695860334098,28.4895125872386,34.0491911269373,27.2401568267993,9.40783135079174,32.7726629431476,21.2402527695052,52.5076082650887,168.886238011985,121.834873175391,0.983528546038072,1.37968373152366,0,0,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0,0.441056796109924,0.49465875882444,0,0,0,0,46.928414697406,0,0.512612642393558,0.619160603889667,0.740778109478847,0.376736914009382,0,0.228778173206523,0,0.139951452323658,0.276399947608848,0,0,0,0.108005340821801,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58005560314089,0,0.102710957164827,0,0,0,0.240390899039938,0,0.201932899896295,0,0.403304740547362,0.974578807397524,0.384847366561318,0.467507608726276,0.453460767230423,0,0,0,1.15913756419314,0.187682475451182,0.183151624267265,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0.320919209591815,1.01078884705519,1.2673964994512,0.943131706930381,0.749132059759059,0.704276676453562,0.574354689556133,0,0.115884325944855,0.192909220463705,0.412085900803307,0.294397840268795,0.342869252385415,0.532427418478012,0.238436189947321,0.145346416632329,0.752875043322645,0.25384382367503,0.182927972872773,0.526139422875686,0.135804113845862,0,0,0.0985044823755635,0,0.464810523557898,0.385813221962283,0,1.87145286756327,0.859484216193193,0,0,0.231867835620421 | |phase1_expression=0,10.4692622291808,6.82498859084304,13.9133537201142,27.0483694171027,42.4734557937081,182.685084945701,0.129123323441576,0,0,0,0,0,0,0,0,0,2.05050407482854,2.19383093769182,2.54633791078818,3.40173160604279,0,0,106.234968734822,88.7813917729948,15.5042630311055,47.3838195774982,75.6304026727471,394.108571952519,90.982876843335,48.5589818335117,0,0,15.8481681015439,6.64358725427932,60.1769416197742,11.637653306955,18.8339233831608,28.9094077473806,31.9349483824017,54.1172968988533,37.5675016727145,46.6089938909907,0,0,0,0,0,0,0,0.139986421625363,0,0.335565212115473,0,0,0,0,0,0,0,0,0,0,3.1496490104849,1.97773272513395,4.2628806896766,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0.860423876981386,0,0,0,0,14.0444420131752,0,0,0,0,0,0,0,0,0,0,47.5004939631289,4.14300613835475,0.148442139064825,0,0,0,0.150722640552623,0,0.376999773989026,0,1.3013942122792,4.42305275974937,0.161766849947409,0.220841518460394,0,5.59175283654366,0,0,369.390901831623,0.239630249011841,1.79970819298022,0.381210681219194,0,0,0,0,0,0,0,0,0.746441823660558,0.252722758433675,0.631325567659422,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,1.02939162845886,0,0.207125772535502,0,0,0.23674473558521,0,0,0,0,0,0,0.164167464079095,0,0,0.439100230582101,0.134206418760372,0,0,5.28670052774077,159.992592831444,0,0,0,0.201683524623343,0.22237804384487,0.380451252225118,74.5010626624883,0.494096864172033,1.25667604400135,0.596869416123452,2.53453313254856,76.3996497356088,118.011375231583,154.732769318643,0.189667900953082,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0.202860121388503,0,0,0.575392274901621,0,0.274561413188081,0,2.23284568601102,0,0.252578877947112,0,0,14.4107488329952,0,0,0,0.469380496577004,3.35012514883632,30.4695860334098,28.4895125872386,34.0491911269373,27.2401568267993,9.40783135079174,32.7726629431476,21.2402527695052,52.5076082650887,168.886238011985,121.834873175391,0.983528546038072,1.37968373152366,0,0,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0,0.441056796109924,0.49465875882444,0,0,0,0,46.928414697406,0,0.512612642393558,0.619160603889667,0.740778109478847,0.376736914009382,0,0.228778173206523,0,0.139951452323658,0.276399947608848,0,0,0,0.108005340821801,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58005560314089,0,0.102710957164827,0,0,0,0.240390899039938,0,0.201932899896295,0,0.403304740547362,0.974578807397524,0.384847366561318,0.467507608726276,0.453460767230423,0,0,0,1.15913756419314,0.187682475451182,0.183151624267265,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0.320919209591815,1.01078884705519,1.2673964994512,0.943131706930381,0.749132059759059,0.704276676453562,0.574354689556133,0,0.115884325944855,0.192909220463705,0.412085900803307,0.294397840268795,0.342869252385415,0.532427418478012,0.238436189947321,0.145346416632329,0.752875043322645,0.25384382367503,0.182927972872773,0.526139422875686,0.135804113845862,0,0,0.0985044823755635,0,0.464810523557898,0.385813221962283,0,1.87145286756327,0.859484216193193,0,0,0.231867835620421 | ||
|short_description=p1@Lyz1 | |short_description=p1@Lyz1 | ||
}} | }} |
Latest revision as of 15:38, 25 September 2015
Short description: | p1@Lyz1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Lyz1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1008 |
Association with transcript: | 0bp_to_ENSMUST00000092162, NM_013590, uc007hdc.2_5end |
EntrezGene: | Lyz1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.54e-11 | 9 |
epithelial cell of alimentary canal | 1.54e-11 | 9 |
brush border epithelial cell | 2.78e-08 | 6 |
gut absorptive cell | 2.78e-08 | 6 |
enterocyte | 2.78e-08 | 6 |
columnar/cuboidal epithelial cell | 5.86e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 6.73e-20 | 31 |
mucosa | 1.52e-19 | 15 |
intestinal mucosa | 1.08e-16 | 13 |
wall of intestine | 1.08e-16 | 13 |
gastrointestinal system mucosa | 1.08e-16 | 13 |
epithelium of mucosa | 1.54e-11 | 9 |
gastrointestinal system epithelium | 1.54e-11 | 9 |
intestinal epithelium | 1.54e-11 | 9 |
gastrointestinal system | 8.96e-11 | 47 |
organ component layer | 1.47e-10 | 24 |
simple columnar epithelium | 4.67e-09 | 11 |
lung | 2.93e-08 | 14 |
respiratory tube | 2.93e-08 | 14 |
respiration organ | 2.93e-08 | 14 |
pair of lungs | 2.93e-08 | 14 |
lung primordium | 2.93e-08 | 14 |
lung bud | 2.93e-08 | 14 |
digestive system | 4.56e-08 | 116 |
digestive tract | 4.56e-08 | 116 |
primitive gut | 4.56e-08 | 116 |
endoderm-derived structure | 9.14e-08 | 118 |
endoderm | 9.14e-08 | 118 |
presumptive endoderm | 9.14e-08 | 118 |
epithelial bud | 1.28e-07 | 17 |
small intestine | 4.86e-07 | 4 |
subdivision of digestive tract | 7.17e-07 | 114 |