Personal tools

FFCP PHASE1:Mm9::chr3:94202457..94202460,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=320747
|EntrezGene=320747
|HGNC=
|HGNC=
|MCL_coexpression_id=4
|MCL_coexpression_id=4
|TSSclassifier=NA
|UniProt=Q149C3
|UniProt=Q149C3
|association_with_transcript=18bp_to_ENSMUST00000050975_5end
|association_with_transcript=18bp_to_ENSMUST00000050975_5end
|cluster_id=chr3:94202457..94202460,+
|description=CAGE_peak_1_at_Lingo4_5end
|description=CAGE_peak_1_at_Lingo4_5end
|id=chr3:94202457..94202460,+
|id=chr3:94202457..94202460,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001007!6.81e-13!128;UBERON:0001555!6.81e-13!128;UBERON:0007026!6.81e-13!128;UBERON:0002530!1.91e-12!65;UBERON:0004921!2.08e-12!126;UBERON:0004185!2.08e-12!126;UBERON:0000949!2.19e-12!72;UBERON:0004119!3.64e-12!130;UBERON:0000925!3.64e-12!130;UBERON:0006595!3.64e-12!130;UBERON:0002368!2.59e-10!60;UBERON:0003104!1.50e-09!131;UBERON:0009142!1.50e-09!131;UBERON:0000481!1.01e-08!230;UBERON:0000077!1.35e-08!97;UBERON:0001041!1.57e-08!92;UBERON:0005172!2.91e-07!49;UBERON:0005173!2.91e-07!49;UBERON:0002417!2.91e-07!49;UBERON:0000916!2.91e-07!49;UBERON:0005057!4.42e-07!51;UBERON:0002365!7.65e-07!25;UBERON:0002330!7.65e-07!25
|ontology_enrichment_uberon=UBERON:0001007!6.81e-13!128;UBERON:0001555!6.81e-13!128;UBERON:0007026!6.81e-13!128;UBERON:0002530!1.91e-12!65;UBERON:0004921!2.08e-12!126;UBERON:0004185!2.08e-12!126;UBERON:0000949!2.19e-12!72;UBERON:0004119!3.64e-12!130;UBERON:0000925!3.64e-12!130;UBERON:0006595!3.64e-12!130;UBERON:0002368!2.59e-10!60;UBERON:0003104!1.50e-09!131;UBERON:0009142!1.50e-09!131;UBERON:0000481!1.01e-08!230;UBERON:0000077!1.35e-08!97;UBERON:0001041!1.57e-08!92;UBERON:0005172!2.91e-07!49;UBERON:0005173!2.91e-07!49;UBERON:0002417!2.91e-07!49;UBERON:0000916!2.91e-07!49;UBERON:0005057!4.42e-07!51;UBERON:0002365!7.65e-07!25;UBERON:0002330!7.65e-07!25
|ontology_enrichment_uberon_v019_2=UBERON:0000949,1.46e-17,72;UBERON:0002530,1.38e-15,65;UBERON:0002368,9.89e-13,60;UBERON:0003929,4.05e-12,55;UBERON:0004921,1.68e-10,114;UBERON:0002365,3.34e-10,25;UBERON:0002330,3.34e-10,25;UBERON:0001007,3.82e-10,116;UBERON:0001555,3.82e-10,116;UBERON:0007026,3.82e-10,116;UBERON:0004119,8.46e-10,118;UBERON:0000925,8.46e-10,118;UBERON:0006595,8.46e-10,118;UBERON:0003408,2.24e-09,24;UBERON:0000490,6.30e-09,66;UBERON:0002370,1.93e-08,23;UBERON:0000974,1.93e-08,23;UBERON:0004807,1.93e-08,23;UBERON:0005058,1.93e-08,23;UBERON:0003351,1.93e-08,23;UBERON:0009113,1.93e-08,23;UBERON:0003295,1.93e-08,23;UBERON:0009722,1.93e-08,23;UBERON:0005562,1.93e-08,23;UBERON:0007690,1.93e-08,23;UBERON:0005911,3.03e-08,69;UBERON:0006562,5.91e-08,24;UBERON:0001557,5.91e-08,24;UBERON:0001042,5.91e-08,24;UBERON:0008814,5.91e-08,24;UBERON:0009145,5.91e-08,24;UBERON:0002107,1.16e-07,22;UBERON:0007499,1.16e-07,22;UBERON:0006925,1.16e-07,22;UBERON:0009497,1.16e-07,22;UBERON:0000015,1.16e-07,22;UBERON:0002423,1.16e-07,22;UBERON:0006235,1.16e-07,22;UBERON:0008835,1.16e-07,22;UBERON:0003894,1.16e-07,22;UBERON:0004161,1.16e-07,22;UBERON:0008836,1.16e-07,22;UBERON:0009854,3.34e-07,23;UBERON:0009856,3.34e-07,23;UBERON:0001041,5.47e-07,80
|phase1_expression=0.160148847104794,0,0,0,1.00179145989269,0.16787927191189,0,0.129123323441576,0.281577444303333,0.468129052643987,0.171217968225505,0,0,0,0,0,0,0,0.137114433605739,0,0.425216450755349,0.397163804803541,1.04479915655574,0.319984845586813,0.91763712426868,0,0,0.215471232685889,0.760093677825496,0.252030129759931,0.221730510655305,0,0,0,0,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,1.3599426674155,1.61910957491345,1.29955283489534,2.24013443548668,0.983110940922263,0,0,0,0.281686839553361,0,0,0,0,0,0,1.94112595522402,0.517875767294343,0.742210695324124,0.346970653532272,0.913396434936424,0.230615497256059,0.150722640552623,0.23517741427141,0.628332956648377,0.247194967734374,1.01219549843938,0,0.161766849947409,0,0.484875253135222,0,0.585561594023094,0.83778682725382,1.02182822083437,0,0,0,0,0.457500602818626,0,0,0,0.20778804455956,0,0.712875546952214,0.248813941220186,0.505445516867349,0.210441855886474,0,0,0,0.30140963567143,0.204109497453984,0.12811372028485,0.468508622798644,0,0,0,0,0,0,0.696504333044333,0.61734640922383,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0.154267112887378,0,0,0.583826711835847,0,0.820837320395476,0.0810688095458557,1.31579988682799,0.878200461164203,1.20785776884335,0.420579897128254,0,1.98251269790279,2.64450566663544,0,0,0.128867461322093,0.403367049246685,0.22237804384487,1.52180500890047,0.949058123089023,1.97638745668813,4.52403375840485,2.38747766449381,4.67913809085888,0,2.59365659849633,1.99141273254367,0,0.228497025219458,0,1.22190796707189,0.387904974335251,0.701358198903186,1.20149420536089,1.47610147979602,0.784993639206874,1.60416313098341,5.92905254174298,0,0,0.224862112384854,0,0.241177159752417,0.763877555344259,0.287696137450811,0.648540907100142,1.64736847912849,11.5014565221884,4.46569137202204,5.30464044294753,2.27320990152401,1.4351793081753,4.3419916922703,0.369506380333209,0,0,0,0,0.335012514883631,0,0.585400943573396,0.157635144106191,0.221464689648775,0.159454768657487,0.327726629431476,0.518054945597687,0.433947175744535,0,0,1.47529281905711,1.10374698521893,0,0,0.163934945376675,1.26235463602186,0,0,0,0,0,0,0,0,0,0,0,0.534196811001766,0.162886959353576,0.989820737835213,0,0,1.51161778482376,1.13163047853539,0,0.307435147943927,1.03371317267288,1.81766864738753,2.13898427030833,1.26414703174326,1.05418608574999,1.03135543248187,1.02131881726136,0,0.258717367565509,0.214337035031592,0.354680467284547,1.24858172321449,0.658196082408484,3.04464949114599,0,0,0.661585194164886,1.48397627647332,1.29171541356724,0.301564624640779,0.358117032009409,0,2.04036585640896,0.18542530201051,0.170870880797853,0.412773735926445,0.370389054739423,0,0,0,0,0,0,0.954670618015114,0,0,0.432021363287205,0.627264888043406,0.218362563746178,0.809186078308924,1.23980183588004,0.523511883968059,0.648074866458964,1.86401793926078,0,0.149516546043979,0.165458490457098,0.194451188344048,0.516639293910924,0.506868376472335,0.117357238645754,0.13020438484395,0.629156066554265,0.483168241652012,0,9.16432249821717,0,0.102710957164827,1.16928740680016,4.11761400035207,6.35780335300048,9.73583141111748,14.9166422446323,11.7121081939851,11.964468644835,12.6032731421051,9.84324595471499,16.356013078856,16.3627663054197,0.453460767230423,0,0,0,0.579568782096571,0.375364950902364,0.36630324853453,0.643105137237198,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412070114477788,0,0.505394423527595,0,0.377252682772152,0.37456602987953,0.128050304809739,0.34461281373368,0,0,0.192909220463705,0.412085900803307,0.294397840268795,0.342869252385415,0,0,0.290692833264657,0.188218760830661,0.25384382367503,0,0.263069711437843,0.271608227691724,0,0.237270036248348,0.492522411877817,0,0.464810523557898,0.578719832943424,0,0,0.644613162144895,0.382576664137687,0.220591419119515,0.231867835620421
|phase1_expression=0.160148847104794,0,0,0,1.00179145989269,0.16787927191189,0,0.129123323441576,0.281577444303333,0.468129052643987,0.171217968225505,0,0,0,0,0,0,0,0.137114433605739,0,0.425216450755349,0.397163804803541,1.04479915655574,0.319984845586813,0.91763712426868,0,0,0.215471232685889,0.760093677825496,0.252030129759931,0.221730510655305,0,0,0,0,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,1.3599426674155,1.61910957491345,1.29955283489534,2.24013443548668,0.983110940922263,0,0,0,0.281686839553361,0,0,0,0,0,0,1.94112595522402,0.517875767294343,0.742210695324124,0.346970653532272,0.913396434936424,0.230615497256059,0.150722640552623,0.23517741427141,0.628332956648377,0.247194967734374,1.01219549843938,0,0.161766849947409,0,0.484875253135222,0,0.585561594023094,0.83778682725382,1.02182822083437,0,0,0,0,0.457500602818626,0,0,0,0.20778804455956,0,0.712875546952214,0.248813941220186,0.505445516867349,0.210441855886474,0,0,0,0.30140963567143,0.204109497453984,0.12811372028485,0.468508622798644,0,0,0,0,0,0,0.696504333044333,0.61734640922383,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0.154267112887378,0,0,0.583826711835847,0,0.820837320395476,0.0810688095458557,1.31579988682799,0.878200461164203,1.20785776884335,0.420579897128254,0,1.98251269790279,2.64450566663544,0,0,0.128867461322093,0.403367049246685,0.22237804384487,1.52180500890047,0.949058123089023,1.97638745668813,4.52403375840485,2.38747766449381,4.67913809085888,0,2.59365659849633,1.99141273254367,0,0.228497025219458,0,1.22190796707189,0.387904974335251,0.701358198903186,1.20149420536089,1.47610147979602,0.784993639206874,1.60416313098341,5.92905254174298,0,0,0.224862112384854,0,0.241177159752417,0.763877555344259,0.287696137450811,0.648540907100142,1.64736847912849,11.5014565221884,4.46569137202204,5.30464044294753,2.27320990152401,1.4351793081753,4.3419916922703,0.369506380333209,0,0,0,0,0.335012514883631,0,0.585400943573396,0.157635144106191,0.221464689648775,0.159454768657487,0.327726629431476,0.518054945597687,0.433947175744535,0,0,1.47529281905711,1.10374698521893,0,0,0.163934945376675,1.26235463602186,0,0,0,0,0,0,0,0,0,0,0,0.534196811001766,0.162886959353576,0.989820737835213,0,0,1.51161778482376,1.13163047853539,0,0.307435147943927,1.03371317267288,1.81766864738753,2.13898427030833,1.26414703174326,1.05418608574999,1.03135543248187,1.02131881726136,0,0.258717367565509,0.214337035031592,0.354680467284547,1.24858172321449,0.658196082408484,3.04464949114599,0,0,0.661585194164886,1.48397627647332,1.29171541356724,0.301564624640779,0.358117032009409,0,2.04036585640896,0.18542530201051,0.170870880797853,0.412773735926445,0.370389054739423,0,0,0,0,0,0,0.954670618015114,0,0,0.432021363287205,0.627264888043406,0.218362563746178,0.809186078308924,1.23980183588004,0.523511883968059,0.648074866458964,1.86401793926078,0,0.149516546043979,0.165458490457098,0.194451188344048,0.516639293910924,0.506868376472335,0.117357238645754,0.13020438484395,0.629156066554265,0.483168241652012,0,9.16432249821717,0,0.102710957164827,1.16928740680016,4.11761400035207,6.35780335300048,9.73583141111748,14.9166422446323,11.7121081939851,11.964468644835,12.6032731421051,9.84324595471499,16.356013078856,16.3627663054197,0.453460767230423,0,0,0,0.579568782096571,0.375364950902364,0.36630324853453,0.643105137237198,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412070114477788,0,0.505394423527595,0,0.377252682772152,0.37456602987953,0.128050304809739,0.34461281373368,0,0,0.192909220463705,0.412085900803307,0.294397840268795,0.342869252385415,0,0,0.290692833264657,0.188218760830661,0.25384382367503,0,0.263069711437843,0.271608227691724,0,0.237270036248348,0.492522411877817,0,0.464810523557898,0.578719832943424,0,0,0.644613162144895,0.382576664137687,0.220591419119515,0.231867835620421
|short_description=p1@Lingo4
|short_description=p1@Lingo4
}}
}}

Latest revision as of 22:43, 25 September 2015

Short description:p1@Lingo4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Lingo4_5end
Coexpression cluster:MCL_coexpression_mm9:4
Association with transcript: 18bp_to_ENSMUST00000050975_5end
EntrezGene:Lingo4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Lingo4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.04
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.76
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.24
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.94
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H11.01
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I61.32
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D21.21
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I31.98
intestine, adult.CNhs10496.178-9A32.64
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F71.52
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E91.98
intestine, neonate N06.CNhs11102.688-20B84.52
intestine, neonate N07.CNhs11095.720-20F22.39
intestine, neonate N10.CNhs11098.755-23A54.68
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E32.59
intestine, neonate N30.CNhs11131.1384-42G11.99
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.70
kidney, neonate N10.CNhs11206.758-6D51.20
kidney, neonate N20.CNhs11113.832-19I11.48
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H11.60
liver, adult pregnant day01.CNhs10466.508-5B25.93
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G21.65
liver, neonate N06.CNhs11101.684-20A811.50
liver, neonate N07.CNhs11103.716-20H24.47
liver, neonate N10.CNhs11115.751-24B95.30
liver, neonate N20.CNhs11220.823-25A32.27
liver, neonate N25.CNhs11198.1368-26H11.44
liver, neonate N30.CNhs11106.1382-42D14.34
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D82.14
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F61.25
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E93.04
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C31.48
skin, neonate N00.CNhs11124.650-25G41.29
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I12.04
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A91.24
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B59.16
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C51.17
thymus, embryo E17.CNhs10581.478-18C14.12
thymus, embryo E18.CNhs10595.1273-19G46.36
thymus, neonate N02.CNhs11181.1541-43F89.74
thymus, neonate N03.CNhs11137.2104-43C714.92
thymus, neonate N06.CNhs11197.681-26C411.71
thymus, neonate N07.CNhs11211.713-19D311.96
thymus, neonate N10.CNhs11194.748-24E412.60
thymus, neonate N20.CNhs11186.820-7A29.84
thymus, neonate N25.CNhs11125.1362-25G716.36
thymus, neonate N30.CNhs11132.1393-42G216.36
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.13
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
endocrine system1.46e-1772
gland1.38e-1565
endocrine gland9.89e-1360
gut epithelium4.05e-1255
subdivision of digestive tract1.68e-10114
exocrine gland3.34e-1025
exocrine system3.34e-1025
digestive system3.82e-10116
digestive tract3.82e-10116
primitive gut3.82e-10116
endoderm-derived structure8.46e-10118
endoderm8.46e-10118
presumptive endoderm8.46e-10118
gland of gut2.24e-0924
unilaminar epithelium6.30e-0966
thymus1.93e-0823
neck1.93e-0823
respiratory system epithelium1.93e-0823
hemolymphoid system gland1.93e-0823
pharyngeal epithelium1.93e-0823
thymic region1.93e-0823
pharyngeal gland1.93e-0823
entire pharyngeal arch endoderm1.93e-0823
thymus primordium1.93e-0823
early pharyngeal endoderm1.93e-0823
endo-epithelium3.03e-0869
pharynx5.91e-0824
upper respiratory tract5.91e-0824
chordate pharynx5.91e-0824
pharyngeal arch system5.91e-0824
pharyngeal region of foregut5.91e-0824
liver1.16e-0722
epithelial sac1.16e-0722
digestive gland1.16e-0722
epithelium of foregut-midgut junction1.16e-0722
anatomical boundary1.16e-0722
hepatobiliary system1.16e-0722
foregut-midgut junction1.16e-0722
hepatic diverticulum1.16e-0722
liver primordium1.16e-0722
septum transversum1.16e-0722
liver bud1.16e-0722
digestive tract diverticulum3.34e-0723
sac3.34e-0723
foregut5.47e-0780
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr3:94202457..94202460,%2B&oldid=4218356"