Personal tools

FFCP PHASE1:Mm9::chr10:80962431..80962458,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=13611
|EntrezGene=13611
|HGNC=
|HGNC=
|MCL_coexpression_id=36
|MCL_coexpression_id=36
|TSSclassifier=NA
|UniProt=Q9Z0L1
|UniProt=Q9Z0L1
|association_with_transcript=0bp_to_ENSMUST00000053646_5end
|association_with_transcript=0bp_to_ENSMUST00000053646_5end
|cluster_id=chr10:80962431..80962458,-
|description=CAGE_peak_3_at_S1pr4_5end
|description=CAGE_peak_3_at_S1pr4_5end
|id=chr10:80962431..80962458,-
|id=chr10:80962431..80962458,-
|ontology_enrichment_celltype=CL:0000988!3.87e-14!32;CL:0002032!3.87e-14!32;CL:0000037!3.87e-14!32;CL:0000566!3.87e-14!32;CL:0000837!3.87e-14!32;CL:0002031!2.92e-10!25;CL:0000838!1.34e-09!12;CL:0000791!2.16e-09!9;CL:0000789!2.16e-09!9;CL:0002420!2.16e-09!9;CL:0002419!2.16e-09!9;CL:0000790!2.16e-09!9;CL:0000084!9.69e-09!11;CL:0000827!9.69e-09!11;CL:0000542!1.37e-08!13;CL:0000051!1.37e-08!13;CL:0000624!2.58e-08!8;CL:0002320!2.06e-07!46;CL:0000134!2.06e-07!46;CL:0000049!4.97e-07!19
|ontology_enrichment_celltype=CL:0000988!3.87e-14!32;CL:0002032!3.87e-14!32;CL:0000037!3.87e-14!32;CL:0000566!3.87e-14!32;CL:0000837!3.87e-14!32;CL:0002031!2.92e-10!25;CL:0000838!1.34e-09!12;CL:0000791!2.16e-09!9;CL:0000789!2.16e-09!9;CL:0002420!2.16e-09!9;CL:0002419!2.16e-09!9;CL:0000790!2.16e-09!9;CL:0000084!9.69e-09!11;CL:0000827!9.69e-09!11;CL:0000542!1.37e-08!13;CL:0000051!1.37e-08!13;CL:0000624!2.58e-08!8;CL:0002320!2.06e-07!46;CL:0000134!2.06e-07!46;CL:0000049!4.97e-07!19
|ontology_enrichment_celltype_v019_2=CL:0000988,1.95e-20,32;CL:0002032,1.95e-20,32;CL:0000037,1.95e-20,32;CL:0000837,1.95e-20,32;CL:0002031,3.33e-13,25;CL:0002320,1.12e-12,46;CL:0000134,1.12e-12,46;CL:0000049,5.53e-12,19;CL:0000791,3.33e-11,9;CL:0000789,3.33e-11,9;CL:0002420,3.33e-11,9;CL:0002419,3.33e-11,9;CL:0000790,3.33e-11,9;CL:0000838,2.14e-10,12;CL:0000219,4.47e-10,54;CL:0000542,1.78e-09,13;CL:0000051,1.78e-09,13;CL:0000624,2.54e-09,8;CL:0000084,6.08e-09,11;CL:0000827,6.08e-09,11;CL:0000763,2.17e-08,16;CL:0000553,4.30e-08,6;CL:0000556,4.30e-08,6;CL:0000034,7.17e-08,97;CL:0000050,2.44e-07,9;CL:0000738,6.88e-07,17;CL:0002087,6.88e-07,17
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=DOID:0060100,1.72e-07,3;DOID:4045,1.72e-07,3
|ontology_enrichment_uberon=UBERON:0002193!5.60e-21!48;UBERON:0002390!5.13e-19!45;UBERON:0003061!5.13e-19!45;UBERON:0004177!1.90e-18!29;UBERON:0002405!1.91e-16!70;UBERON:0002370!2.00e-14!23;UBERON:0000974!2.00e-14!23;UBERON:0004807!2.00e-14!23;UBERON:0005058!2.00e-14!23;UBERON:0003351!2.00e-14!23;UBERON:0009113!2.00e-14!23;UBERON:0003295!2.00e-14!23;UBERON:0009722!2.00e-14!23;UBERON:0005562!2.00e-14!23;UBERON:0007690!2.00e-14!23;UBERON:0006562!1.58e-13!24;UBERON:0003408!1.58e-13!24;UBERON:0001557!1.58e-13!24;UBERON:0001042!1.58e-13!24;UBERON:0008814!1.58e-13!24;UBERON:0009145!1.58e-13!24;UBERON:0005057!1.93e-12!51;UBERON:0000072!2.95e-11!27;UBERON:0000065!2.97e-10!41;UBERON:0001004!8.20e-10!42;UBERON:0003081!2.04e-08!88;UBERON:0002384!2.06e-07!46;UBERON:0000063!3.22e-07!35
|ontology_enrichment_uberon=UBERON:0002193!5.60e-21!48;UBERON:0002390!5.13e-19!45;UBERON:0003061!5.13e-19!45;UBERON:0004177!1.90e-18!29;UBERON:0002405!1.91e-16!70;UBERON:0002370!2.00e-14!23;UBERON:0000974!2.00e-14!23;UBERON:0004807!2.00e-14!23;UBERON:0005058!2.00e-14!23;UBERON:0003351!2.00e-14!23;UBERON:0009113!2.00e-14!23;UBERON:0003295!2.00e-14!23;UBERON:0009722!2.00e-14!23;UBERON:0005562!2.00e-14!23;UBERON:0007690!2.00e-14!23;UBERON:0006562!1.58e-13!24;UBERON:0003408!1.58e-13!24;UBERON:0001557!1.58e-13!24;UBERON:0001042!1.58e-13!24;UBERON:0008814!1.58e-13!24;UBERON:0009145!1.58e-13!24;UBERON:0005057!1.93e-12!51;UBERON:0000072!2.95e-11!27;UBERON:0000065!2.97e-10!41;UBERON:0001004!8.20e-10!42;UBERON:0003081!2.04e-08!88;UBERON:0002384!2.06e-07!46;UBERON:0000063!3.22e-07!35
|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.82e-22,48;UBERON:0002405,4.82e-22,48;UBERON:0002390,5.61e-22,45;UBERON:0003061,5.61e-22,45;UBERON:0004177,3.14e-16,29;UBERON:0005057,3.14e-16,29;UBERON:0002370,1.47e-14,23;UBERON:0000974,1.47e-14,23;UBERON:0004807,1.47e-14,23;UBERON:0005058,1.47e-14,23;UBERON:0003351,1.47e-14,23;UBERON:0009113,1.47e-14,23;UBERON:0003295,1.47e-14,23;UBERON:0009722,1.47e-14,23;UBERON:0005562,1.47e-14,23;UBERON:0007690,1.47e-14,23;UBERON:0006562,8.25e-14,24;UBERON:0003408,8.25e-14,24;UBERON:0001557,8.25e-14,24;UBERON:0001042,8.25e-14,24;UBERON:0008814,8.25e-14,24;UBERON:0009145,8.25e-14,24;UBERON:0000077,1.01e-12,35;UBERON:0002384,1.12e-12,46;UBERON:0000072,6.75e-12,27;UBERON:0003081,2.94e-10,87;UBERON:0007811,4.24e-08,36;UBERON:0000926,4.33e-08,120;UBERON:0004120,4.33e-08,120;UBERON:0006603,4.33e-08,120;UBERON:0000065,9.95e-07,41
|phase1_expression=0,0,0,0,0,0,0,11.1046058159756,1.12630977721333,1.63845168425395,0.171217968225505,0.8774937489487,5.47842335779858,9.70366466850871,1.33243904726265,1.01237633694913,0,3.3123527362615,2.60517423850904,4.66828616977833,0.340173160604279,0.397163804803541,0,0.47997726838022,0.22940928106717,0,0,0,0,0.252030129759931,0,0.635030673459631,1.84519436275371,0,0,0,0,7.95210098400125,3.1253413780952,4.18818995179039,8.82347232046521,6.14740936462601,6.311634589405,0,0,0,0,0,0,0,0,0,2.18117387875057,7.25362142011344,7.05796978199174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302904773332736,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.34255163915718,1.55362730188303,0.148442139064825,0,0,0,0,0.117588707135705,0,0.247194967734374,0.144599356919912,2.65383165584962,0.161766849947409,0.441683036920787,0,0,0,0,0,1.1981512450592,1.19980546198682,1.39777249780371,0,0,0,0,0,0,0,0,1.11966273549084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80885274925294,1.28673953557358,2.27330799516474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0.128867461322093,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0.123397163921801,0,0,0.393117990226406,0.224862112384854,0.811440485554012,0,0.25462585178142,0,0.162135226775035,0.274561413188081,0,0.372140947668503,0,0,0,0,0.554259570499814,0,0,0,0,0,0,0,0.315270288212382,0,0.318909537314974,0.491589944147214,0.690739927463582,0.723245292907558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,1.03135543248187,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,2.39219233116994,0.412773735926445,0.370389054739423,0.188368457004691,1.0935538217682,1.37266903923914,1.69978429993855,1.6794174278839,1.79659965945751,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,3.79213344753814,0.608175645870493,0.205421914329655,0.909445760844565,0.358053391334963,1.58945083825012,2.76449533895928,2.06765338044408,2.22126189885925,2.89585865288999,2.72230699869469,2.72882066071307,2.69393156592922,4.09069157635491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0.222246727801615,0,0,0,0,0,0.0936415074698824,0.128050304809739,0,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0.231867835620421
|phase1_expression=0,0,0,0,0,0,0,11.1046058159756,1.12630977721333,1.63845168425395,0.171217968225505,0.8774937489487,5.47842335779858,9.70366466850871,1.33243904726265,1.01237633694913,0,3.3123527362615,2.60517423850904,4.66828616977833,0.340173160604279,0.397163804803541,0,0.47997726838022,0.22940928106717,0,0,0,0,0.252030129759931,0,0.635030673459631,1.84519436275371,0,0,0,0,7.95210098400125,3.1253413780952,4.18818995179039,8.82347232046521,6.14740936462601,6.311634589405,0,0,0,0,0,0,0,0,0,2.18117387875057,7.25362142011344,7.05796978199174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302904773332736,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.34255163915718,1.55362730188303,0.148442139064825,0,0,0,0,0.117588707135705,0,0.247194967734374,0.144599356919912,2.65383165584962,0.161766849947409,0.441683036920787,0,0,0,0,0,1.1981512450592,1.19980546198682,1.39777249780371,0,0,0,0,0,0,0,0,1.11966273549084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80885274925294,1.28673953557358,2.27330799516474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0.128867461322093,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0.123397163921801,0,0,0.393117990226406,0.224862112384854,0.811440485554012,0,0.25462585178142,0,0.162135226775035,0.274561413188081,0,0.372140947668503,0,0,0,0,0.554259570499814,0,0,0,0,0,0,0,0.315270288212382,0,0.318909537314974,0.491589944147214,0.690739927463582,0.723245292907558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,1.03135543248187,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,2.39219233116994,0.412773735926445,0.370389054739423,0.188368457004691,1.0935538217682,1.37266903923914,1.69978429993855,1.6794174278839,1.79659965945751,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,3.79213344753814,0.608175645870493,0.205421914329655,0.909445760844565,0.358053391334963,1.58945083825012,2.76449533895928,2.06765338044408,2.22126189885925,2.89585865288999,2.72230699869469,2.72882066071307,2.69393156592922,4.09069157635491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0.222246727801615,0,0,0,0,0,0.0936415074698824,0.128050304809739,0,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0.231867835620421
|short_description=p3@S1pr4
|short_description=p3@S1pr4
}}
}}

Latest revision as of 11:16, 26 September 2015

Short description:p3@S1pr4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_S1pr4_5end
Coexpression cluster:MCL_coexpression_mm9:36
Association with transcript: 0bp_to_ENSMUST00000053646_5end
EntrezGene:S1pr4
Link to Zenbu:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




0
2
4
6
8
10
12




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data