FFCP PHASE1:Mm9::chr7:52494762..52494780,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12493 | |EntrezGene=12493 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=36 | |MCL_coexpression_id=36 | ||
|TSSclassifier=NA | |||
|UniProt=Q3U429 | |UniProt=Q3U429 | ||
|association_with_transcript=-277bp_to_ENSMUST00000033063_5end | |association_with_transcript=-277bp_to_ENSMUST00000033063_5end | ||
|cluster_id=chr7:52494762..52494780,- | |||
|description=CAGE_peak_6_at_Cd37_5end | |description=CAGE_peak_6_at_Cd37_5end | ||
|id=chr7:52494762..52494780,- | |id=chr7:52494762..52494780,- | ||
|ontology_enrichment_celltype=CL:0000542!2.54e-16!13;CL:0000051!2.54e-16!13;CL:0000838!1.40e-15!12;CL:0000084!1.13e-14!11;CL:0000827!1.13e-14!11;CL:0000791!2.47e-12!9;CL:0000789!2.47e-12!9;CL:0002420!2.47e-12!9;CL:0002419!2.47e-12!9;CL:0000790!2.47e-12!9;CL:0000738!1.47e-11!17;CL:0002087!1.47e-11!17;CL:0000624!5.81e-11!8;CL:0000988!9.08e-11!32;CL:0002032!9.08e-11!32;CL:0000037!9.08e-11!32;CL:0000566!9.08e-11!32;CL:0000837!9.08e-11!32;CL:0002031!1.93e-09!25;CL:0000893!3.01e-08!6;CL:0002489!3.01e-08!6;CL:0000898!3.01e-08!6;CL:0000809!3.01e-08!6;CL:0000810!3.01e-08!6;CL:0000895!3.01e-08!6;CL:0000808!3.01e-08!6;CL:0000894!3.01e-08!6;CL:0000806!3.01e-08!6;CL:0000807!3.01e-08!6;CL:0000805!3.01e-08!6;CL:0002425!3.01e-08!6;CL:0002436!3.01e-08!6;CL:0002427!3.01e-08!6;CL:0002428!3.01e-08!6;CL:0002429!3.01e-08!6;CL:0002433!3.01e-08!6;CL:0002431!3.01e-08!6;CL:0002432!3.01e-08!6 | |ontology_enrichment_celltype=CL:0000542!2.54e-16!13;CL:0000051!2.54e-16!13;CL:0000838!1.40e-15!12;CL:0000084!1.13e-14!11;CL:0000827!1.13e-14!11;CL:0000791!2.47e-12!9;CL:0000789!2.47e-12!9;CL:0002420!2.47e-12!9;CL:0002419!2.47e-12!9;CL:0000790!2.47e-12!9;CL:0000738!1.47e-11!17;CL:0002087!1.47e-11!17;CL:0000624!5.81e-11!8;CL:0000988!9.08e-11!32;CL:0002032!9.08e-11!32;CL:0000037!9.08e-11!32;CL:0000566!9.08e-11!32;CL:0000837!9.08e-11!32;CL:0002031!1.93e-09!25;CL:0000893!3.01e-08!6;CL:0002489!3.01e-08!6;CL:0000898!3.01e-08!6;CL:0000809!3.01e-08!6;CL:0000810!3.01e-08!6;CL:0000895!3.01e-08!6;CL:0000808!3.01e-08!6;CL:0000894!3.01e-08!6;CL:0000806!3.01e-08!6;CL:0000807!3.01e-08!6;CL:0000805!3.01e-08!6;CL:0002425!3.01e-08!6;CL:0002436!3.01e-08!6;CL:0002427!3.01e-08!6;CL:0002428!3.01e-08!6;CL:0002429!3.01e-08!6;CL:0002433!3.01e-08!6;CL:0002431!3.01e-08!6;CL:0002432!3.01e-08!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000084,4.68e-16,11;CL:0000827,4.68e-16,11;CL:0000791,9.56e-15,9;CL:0000789,9.56e-15,9;CL:0002420,9.56e-15,9;CL:0002419,9.56e-15,9;CL:0000790,9.56e-15,9;CL:0000838,1.21e-14,12;CL:0000542,1.89e-13,13;CL:0000051,1.89e-13,13;CL:0000624,1.06e-11,8;CL:0000738,4.51e-10,17;CL:0002087,4.51e-10,17;CL:0002031,2.17e-08,25;CL:0000988,7.41e-08,32;CL:0002032,7.41e-08,32;CL:0000037,7.41e-08,32;CL:0000837,7.41e-08,32 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!3.36e-18!29;UBERON:0002370!5.54e-18!23;UBERON:0000974!5.54e-18!23;UBERON:0004807!5.54e-18!23;UBERON:0005058!5.54e-18!23;UBERON:0003351!5.54e-18!23;UBERON:0009113!5.54e-18!23;UBERON:0003295!5.54e-18!23;UBERON:0009722!5.54e-18!23;UBERON:0005562!5.54e-18!23;UBERON:0007690!5.54e-18!23;UBERON:0006562!5.60e-17!24;UBERON:0003408!5.60e-17!24;UBERON:0001557!5.60e-17!24;UBERON:0001042!5.60e-17!24;UBERON:0008814!5.60e-17!24;UBERON:0009145!5.60e-17!24;UBERON:0000072!2.02e-14!27;UBERON:0002390!2.76e-14!45;UBERON:0003061!2.76e-14!45;UBERON:0002193!3.51e-14!48;UBERON:0000065!1.73e-12!41;UBERON:0005057!2.76e-12!51;UBERON:0001004!5.06e-12!42;UBERON:0002405!2.49e-11!70;UBERON:0000063!5.60e-11!35;UBERON:0005911!3.96e-08!69;UBERON:0003929!6.87e-08!55;UBERON:0002368!2.17e-07!60;UBERON:0000490!3.66e-07!66 | |ontology_enrichment_uberon=UBERON:0004177!3.36e-18!29;UBERON:0002370!5.54e-18!23;UBERON:0000974!5.54e-18!23;UBERON:0004807!5.54e-18!23;UBERON:0005058!5.54e-18!23;UBERON:0003351!5.54e-18!23;UBERON:0009113!5.54e-18!23;UBERON:0003295!5.54e-18!23;UBERON:0009722!5.54e-18!23;UBERON:0005562!5.54e-18!23;UBERON:0007690!5.54e-18!23;UBERON:0006562!5.60e-17!24;UBERON:0003408!5.60e-17!24;UBERON:0001557!5.60e-17!24;UBERON:0001042!5.60e-17!24;UBERON:0008814!5.60e-17!24;UBERON:0009145!5.60e-17!24;UBERON:0000072!2.02e-14!27;UBERON:0002390!2.76e-14!45;UBERON:0003061!2.76e-14!45;UBERON:0002193!3.51e-14!48;UBERON:0000065!1.73e-12!41;UBERON:0005057!2.76e-12!51;UBERON:0001004!5.06e-12!42;UBERON:0002405!2.49e-11!70;UBERON:0000063!5.60e-11!35;UBERON:0005911!3.96e-08!69;UBERON:0003929!6.87e-08!55;UBERON:0002368!2.17e-07!60;UBERON:0000490!3.66e-07!66 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.66e-16,23;UBERON:0000974,1.66e-16,23;UBERON:0004807,1.66e-16,23;UBERON:0005058,1.66e-16,23;UBERON:0003351,1.66e-16,23;UBERON:0009113,1.66e-16,23;UBERON:0003295,1.66e-16,23;UBERON:0009722,1.66e-16,23;UBERON:0005562,1.66e-16,23;UBERON:0007690,1.66e-16,23;UBERON:0006562,9.69e-16,24;UBERON:0003408,9.69e-16,24;UBERON:0001557,9.69e-16,24;UBERON:0001042,9.69e-16,24;UBERON:0008814,9.69e-16,24;UBERON:0009145,9.69e-16,24;UBERON:0000072,8.84e-14,27;UBERON:0004177,1.07e-12,29;UBERON:0005057,1.07e-12,29;UBERON:0002390,1.25e-10,45;UBERON:0003061,1.25e-10,45;UBERON:0000077,3.39e-10,35;UBERON:0007811,7.35e-10,36;UBERON:0002193,8.10e-10,48;UBERON:0002405,8.10e-10,48;UBERON:0000065,1.99e-08,41;UBERON:0001004,3.51e-08,42;UBERON:0000153,6.01e-08,43 | |||
|phase1_expression=0,0,0,0,0,0,0,5.55230290798778,1.54867594366833,0.70219357896598,0.68487187290202,0.239316476986009,3.76641605848653,5.50748535239684,0,0,0,0.630924330716475,0.822686601634433,1.27316895539409,0.17008658030214,2.08510997521859,0.783599367416806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.76678467663217,0,2.61761871986899,7.05877785637217,6.83045484958446,6.311634589405,0,0,0,0,0,0,0,0,0,0.503347818173209,2.90144856804538,4.7053131879945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.776813650941515,0,0.173485326766136,0,0,0,0,0,0,0.289198713839823,0.884610551949874,0,0,0,0,0,0,0.255457055208591,0.11981512450592,0,0.254140454146129,0,0,0,0,0,0,0,0,0.497627882440372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02939162845886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0.213288250535234,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0.196558995113203,0,0,0.241177159752417,0.25462585178142,0,0,0.549122826376163,0,0,0.312037673114561,0,0,0,0.184753190166605,0.189491411770485,0,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683483523191411,0,0,0,0.683471138605126,0.915112692826091,1.35982743995084,2.23922323717853,1.93479963326193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0.288030006257865,1.26404448251271,0,0.616265742988964,0.909445760844565,0.537080087002444,1.19208812868759,0.841368146639782,1.9199638532695,1.51449674922221,1.447929326445,0.705783295957884,1.36441033035653,1.34696578296461,1.40252282617883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0,0,5.55230290798778,1.54867594366833,0.70219357896598,0.68487187290202,0.239316476986009,3.76641605848653,5.50748535239684,0,0,0,0.630924330716475,0.822686601634433,1.27316895539409,0.17008658030214,2.08510997521859,0.783599367416806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.76678467663217,0,2.61761871986899,7.05877785637217,6.83045484958446,6.311634589405,0,0,0,0,0,0,0,0,0,0.503347818173209,2.90144856804538,4.7053131879945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.776813650941515,0,0.173485326766136,0,0,0,0,0,0,0.289198713839823,0.884610551949874,0,0,0,0,0,0,0.255457055208591,0.11981512450592,0,0.254140454146129,0,0,0,0,0,0,0,0,0.497627882440372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02939162845886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0.213288250535234,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0.196558995113203,0,0,0.241177159752417,0.25462585178142,0,0,0.549122826376163,0,0,0.312037673114561,0,0,0,0.184753190166605,0.189491411770485,0,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683483523191411,0,0,0,0.683471138605126,0.915112692826091,1.35982743995084,2.23922323717853,1.93479963326193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0.288030006257865,1.26404448251271,0,0.616265742988964,0.909445760844565,0.537080087002444,1.19208812868759,0.841368146639782,1.9199638532695,1.51449674922221,1.447929326445,0.705783295957884,1.36441033035653,1.34696578296461,1.40252282617883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0.220591419119515,0 | ||
|short_description=p6@Cd37 | |short_description=p6@Cd37 | ||
}} | }} |
Latest revision as of 21:00, 26 September 2015
Short description: | p6@Cd37 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Cd37_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | -277bp_to_ENSMUST00000033063_5end |
EntrezGene: | Cd37 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 4.68e-16 | 11 |
pro-T cell | 4.68e-16 | 11 |
mature alpha-beta T cell | 9.56e-15 | 9 |
alpha-beta T cell | 9.56e-15 | 9 |
immature T cell | 9.56e-15 | 9 |
mature T cell | 9.56e-15 | 9 |
immature alpha-beta T cell | 9.56e-15 | 9 |
lymphoid lineage restricted progenitor cell | 1.21e-14 | 12 |
lymphocyte | 1.89e-13 | 13 |
common lymphoid progenitor | 1.89e-13 | 13 |
CD4-positive, alpha-beta T cell | 1.06e-11 | 8 |
leukocyte | 4.51e-10 | 17 |
nongranular leukocyte | 4.51e-10 | 17 |
hematopoietic lineage restricted progenitor cell | 2.17e-08 | 25 |
hematopoietic cell | 7.41e-08 | 32 |
hematopoietic oligopotent progenitor cell | 7.41e-08 | 32 |
hematopoietic stem cell | 7.41e-08 | 32 |
hematopoietic multipotent progenitor cell | 7.41e-08 | 32 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.66e-16 | 23 |
neck | 1.66e-16 | 23 |
respiratory system epithelium | 1.66e-16 | 23 |
hemolymphoid system gland | 1.66e-16 | 23 |
pharyngeal epithelium | 1.66e-16 | 23 |
thymic region | 1.66e-16 | 23 |
pharyngeal gland | 1.66e-16 | 23 |
entire pharyngeal arch endoderm | 1.66e-16 | 23 |
thymus primordium | 1.66e-16 | 23 |
early pharyngeal endoderm | 1.66e-16 | 23 |
pharynx | 9.69e-16 | 24 |
gland of gut | 9.69e-16 | 24 |
upper respiratory tract | 9.69e-16 | 24 |
chordate pharynx | 9.69e-16 | 24 |
pharyngeal arch system | 9.69e-16 | 24 |
pharyngeal region of foregut | 9.69e-16 | 24 |
segment of respiratory tract | 8.84e-14 | 27 |
hemopoietic organ | 1.07e-12 | 29 |
immune organ | 1.07e-12 | 29 |
hematopoietic system | 1.25e-10 | 45 |
blood island | 1.25e-10 | 45 |
mixed endoderm/mesoderm-derived structure | 3.39e-10 | 35 |
craniocervical region | 7.35e-10 | 36 |
hemolymphoid system | 8.10e-10 | 48 |
immune system | 8.10e-10 | 48 |
respiratory tract | 1.99e-08 | 41 |
respiratory system | 3.51e-08 | 42 |
anterior region of body | 6.01e-08 | 43 |