FFCP PHASE1:Mm9::chr14:121434378..121434408,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=223254 | |EntrezGene=223254 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=459 | |MCL_coexpression_id=459 | ||
|TSSclassifier=NA | |||
|UniProt=E9Q805 | |UniProt=E9Q805 | ||
|association_with_transcript=-13bp_to_ENSMUST00000135010_5end | |association_with_transcript=-13bp_to_ENSMUST00000135010_5end | ||
|cluster_id=chr14:121434378..121434408,+ | |||
|description=CAGE_peak_6_at_Farp1_5end | |description=CAGE_peak_6_at_Farp1_5end | ||
|id=chr14:121434378..121434408,+ | |id=chr14:121434378..121434408,+ | ||
|ontology_enrichment_celltype=CL:0000117!2.95e-14!23;CL:0000337!2.95e-14!23;CL:0000540!2.98e-12!33;CL:0000047!2.98e-12!33;CL:0000031!2.98e-12!33;CL:0000404!2.98e-12!33;CL:0000393!3.11e-10!39;CL:0000211!3.11e-10!39;CL:0002319!6.00e-08!43;CL:0000221!9.47e-08!44;CL:0000133!9.47e-08!44 | |ontology_enrichment_celltype=CL:0000117!2.95e-14!23;CL:0000337!2.95e-14!23;CL:0000540!2.98e-12!33;CL:0000047!2.98e-12!33;CL:0000031!2.98e-12!33;CL:0000404!2.98e-12!33;CL:0000393!3.11e-10!39;CL:0000211!3.11e-10!39;CL:0002319!6.00e-08!43;CL:0000221!9.47e-08!44;CL:0000133!9.47e-08!44 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.16e-22,23;CL:0000337,9.16e-22,23;CL:0000540,5.20e-14,33;CL:0000047,5.20e-14,33;CL:0000031,5.20e-14,33;CL:0000404,5.20e-14,33;CL:0000393,1.00e-10,39;CL:0000211,1.00e-10,39;CL:0002319,4.47e-09,43;CL:0000221,1.03e-08,44;CL:0000133,1.03e-08,44;CL:0002609,7.21e-08,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.59e-24!52;UBERON:0005068!8.59e-24!52;UBERON:0006241!8.59e-24!52;UBERON:0007135!8.59e-24!52;UBERON:0001017!1.21e-23!73;UBERON:0005743!1.21e-23!73;UBERON:0000955!9.31e-23!50;UBERON:0006238!9.31e-23!50;UBERON:0000073!1.73e-22!75;UBERON:0001016!1.73e-22!75;UBERON:0002616!5.55e-22!49;UBERON:0002020!9.07e-21!34;UBERON:0003080!1.12e-20!40;UBERON:0002780!3.30e-20!39;UBERON:0001890!3.30e-20!39;UBERON:0006240!3.30e-20!39;UBERON:0003056!3.77e-20!49;UBERON:0000033!4.01e-20!63;UBERON:0002346!4.02e-20!71;UBERON:0003075!4.02e-20!71;UBERON:0007284!4.02e-20!71;UBERON:0002791!1.47e-17!29;UBERON:0003528!1.47e-17!29;UBERON:0001893!1.47e-17!29;UBERON:0004121!2.62e-17!102;UBERON:0000924!2.62e-17!102;UBERON:0006601!2.62e-17!102;UBERON:0000956!1.35e-13!21;UBERON:0001869!1.35e-13!21;UBERON:0000203!1.35e-13!21;UBERON:0002619!2.84e-11!17;UBERON:0000153!5.03e-10!94;UBERON:0007811!5.35e-09!86;UBERON:0000025!4.66e-08!114;UBERON:0002021!4.99e-08!10;UBERON:0000411!4.99e-08!10;UBERON:0001950!4.99e-08!10;UBERON:0004111!7.06e-07!122 | |ontology_enrichment_uberon=UBERON:0001049!8.59e-24!52;UBERON:0005068!8.59e-24!52;UBERON:0006241!8.59e-24!52;UBERON:0007135!8.59e-24!52;UBERON:0001017!1.21e-23!73;UBERON:0005743!1.21e-23!73;UBERON:0000955!9.31e-23!50;UBERON:0006238!9.31e-23!50;UBERON:0000073!1.73e-22!75;UBERON:0001016!1.73e-22!75;UBERON:0002616!5.55e-22!49;UBERON:0002020!9.07e-21!34;UBERON:0003080!1.12e-20!40;UBERON:0002780!3.30e-20!39;UBERON:0001890!3.30e-20!39;UBERON:0006240!3.30e-20!39;UBERON:0003056!3.77e-20!49;UBERON:0000033!4.01e-20!63;UBERON:0002346!4.02e-20!71;UBERON:0003075!4.02e-20!71;UBERON:0007284!4.02e-20!71;UBERON:0002791!1.47e-17!29;UBERON:0003528!1.47e-17!29;UBERON:0001893!1.47e-17!29;UBERON:0004121!2.62e-17!102;UBERON:0000924!2.62e-17!102;UBERON:0006601!2.62e-17!102;UBERON:0000956!1.35e-13!21;UBERON:0001869!1.35e-13!21;UBERON:0000203!1.35e-13!21;UBERON:0002619!2.84e-11!17;UBERON:0000153!5.03e-10!94;UBERON:0007811!5.35e-09!86;UBERON:0000025!4.66e-08!114;UBERON:0002021!4.99e-08!10;UBERON:0000411!4.99e-08!10;UBERON:0001950!4.99e-08!10;UBERON:0004111!7.06e-07!122 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.33e-33,54;UBERON:0002020,2.38e-30,34;UBERON:0001049,1.26e-29,52;UBERON:0005068,1.26e-29,52;UBERON:0006241,1.26e-29,52;UBERON:0007135,1.26e-29,52;UBERON:0001017,3.65e-28,73;UBERON:0001016,5.52e-27,75;UBERON:0000955,2.15e-26,47;UBERON:0006238,2.15e-26,47;UBERON:0003080,3.96e-26,40;UBERON:0002780,2.41e-25,39;UBERON:0001890,2.41e-25,39;UBERON:0006240,2.41e-25,39;UBERON:0002616,3.43e-25,46;UBERON:0003528,6.39e-25,29;UBERON:0002791,6.39e-25,29;UBERON:0001893,6.39e-25,29;UBERON:0002346,1.71e-21,64;UBERON:0003075,1.71e-21,64;UBERON:0007284,1.71e-21,64;UBERON:0000956,1.27e-19,21;UBERON:0001869,1.27e-19,21;UBERON:0000203,1.27e-19,21;UBERON:0003056,3.06e-19,49;UBERON:0004121,5.33e-18,95;UBERON:0000924,5.33e-18,95;UBERON:0006601,5.33e-18,95;UBERON:0010371,3.34e-17,73;UBERON:0002619,1.15e-15,17;UBERON:0002021,1.16e-12,10;UBERON:0000411,1.16e-12,10;UBERON:0001950,1.16e-12,10;UBERON:0010314,4.83e-11,92 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0.281577444303333,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.101376931219515,0.183546752161682,0,0.218025156380447,0.439372365468944,0.58328969722285,0,0,0,0,0,0,0.573066879877513,0,7.68802551266472,6.87688273053643,10.1413024560989,0,0,0,0,0,0,0,3.42175720617976,5.67024940993101,4.20649922702764,6.56997264128748,3.97563373712904,9.79926393719632,11.7889929352431,11.0306254393203,5.50579404996943,2.68143409978894,2.15049146558741,7.64940468835124,8.5083508550241,10.4182674111352,0.837548997004143,1.68828783009504,1.83357897332172,9.1334861496837,6.54909731675874,5.77838282058432,0,0.0755715601067855,0.579728977403356,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0,0,0.22836775943812,0,0.148442139064825,0.173485326766136,0,0,0.301445281105245,0.352766121407114,0,0.247194967734374,0.289198713839823,0,0.161766849947409,0,0.484875253135222,0,0.585561594023094,1.25668024088073,0,0,0,0,2.39665023047716,1.83000241127451,42.8481340704868,7.82209440865244,7.67146371990992,2.70124457927428,4.38051410282946,0.305518091550949,0.124406970610093,0.758168275301024,0.631325567659422,0.260240885925407,0.459804208866946,0.180062129805349,0.30140963567143,0.884474488967262,0.512454881139399,0.281105173679186,0.517406741478031,0.646703978798527,0.567318240503458,0.879755620819744,0.657587197282725,0.834141747676794,1.0447564995665,0.411564272815887,0.398068533636986,0,0,0,0.207125772535502,0,0.36012412292203,0,0,0.308534225774757,0,0,0.233530684734339,0,0.32833492815819,0.324275238183423,0.146199987425332,0.658650345873152,0.134206418760372,3.36463917702604,17.1850702673405,0,0,0,0.232236671860439,0.257734922644187,0.201683524623343,0.444756087689741,0.380451252225118,0,0.164698954724011,0,0,0.19496408711912,0,0.432276099749388,0,0,0.228497025219458,0,0.407302655690628,0.581857461502877,0.420814919341911,0.316182685621286,0,0,0,0,0,0.196558995113203,0,0,0,0,0.287696137450811,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0,0.947457058852424,0.325929952884052,0.339490171550376,0,0.335012514883631,0.952174563544055,0.390267295715598,0.315270288212382,0.221464689648775,0.318909537314974,0.327726629431476,0,0.144649058581512,0,0,0.491764273019036,0,1.12385412991454,1.75817529888305,0,0.252470927204373,0.315508219416257,0.390438744296638,0.215423397732799,0.716906393857656,0.445597348164788,0,1.21443210502468,0.292255857911312,0.395287777946524,11.2462460747632,0.141940085208269,0.712262414669021,0.977321756121456,0.329940245945071,0,0.242780636154981,0.604647113929502,0.377210159511796,0.590603785761546,0.307435147943927,0,0,1.06949213515416,0.316036757935816,0,0,2.38307724027652,0.36012218806262,0.388076051348264,0.857348140126369,1.06404140185364,0.535106452806212,1.81003922662333,3.34911444026059,0,0.21183207086382,0,0,0.484393280087717,0.180938774784468,0.119372344003136,0,0,0.556275906031529,0,0.412773735926445,0,0,0,0,0.169978429993855,0.279902904647316,0,0,0.474503990371703,1.01659733563424,0,0.418176592028937,0,0,0.0826534557253359,0,0,0,0,0.448549638131936,0.165458490457098,0.583353565032143,0.516639293910924,0,0.58678619322877,0.2604087696879,0.209718688851422,0,0,0,0.202725215290164,0.308132871494482,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0.443971906748129,0,0,0,0,0.549454872801795,0.214368379079066,0.501572104035363,12.9892923801925,11.9684561491866,9.73922372846974,10.998603669996,8.90607275701835,6.0431511791176,6.75022500231806,8.10578165803597,7.25027854374727,6.21312374102184,0,0.399024873401031,0.682934423016537,2.43106717068294,0.838452650511929,1.83843508450014,3.77819437262746,3.09052585858341,3.20919209591815,2.27427490587418,2.5347929989024,3.39527414494937,1.21733959710847,1.92075457214608,1.83793500657962,1.90517476513229,2.43357084484197,2.12200142510076,3.29668720642645,1.76638704161277,2.40008476669791,1.77475806159337,2.62279808942053,2.18019624948493,2.72917203204459,2.70766745253365,1.64635175585495,2.10455769150274,1.90125759384206,1.68342681497322,1.77952527186261,2.46261205938909,0.818462086339379,3.09873682371932,1.92906610981141,5.49583271463481,1.40358965067245,1.71896843238639,1.3390183244819,0.220591419119515,0.231867835620421 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|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0.281577444303333,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.101376931219515,0.183546752161682,0,0.218025156380447,0.439372365468944,0.58328969722285,0,0,0,0,0,0,0.573066879877513,0,7.68802551266472,6.87688273053643,10.1413024560989,0,0,0,0,0,0,0,3.42175720617976,5.67024940993101,4.20649922702764,6.56997264128748,3.97563373712904,9.79926393719632,11.7889929352431,11.0306254393203,5.50579404996943,2.68143409978894,2.15049146558741,7.64940468835124,8.5083508550241,10.4182674111352,0.837548997004143,1.68828783009504,1.83357897332172,9.1334861496837,6.54909731675874,5.77838282058432,0,0.0755715601067855,0.579728977403356,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0,0,0.22836775943812,0,0.148442139064825,0.173485326766136,0,0,0.301445281105245,0.352766121407114,0,0.247194967734374,0.289198713839823,0,0.161766849947409,0,0.484875253135222,0,0.585561594023094,1.25668024088073,0,0,0,0,2.39665023047716,1.83000241127451,42.8481340704868,7.82209440865244,7.67146371990992,2.70124457927428,4.38051410282946,0.305518091550949,0.124406970610093,0.758168275301024,0.631325567659422,0.260240885925407,0.459804208866946,0.180062129805349,0.30140963567143,0.884474488967262,0.512454881139399,0.281105173679186,0.517406741478031,0.646703978798527,0.567318240503458,0.879755620819744,0.657587197282725,0.834141747676794,1.0447564995665,0.411564272815887,0.398068533636986,0,0,0,0.207125772535502,0,0.36012412292203,0,0,0.308534225774757,0,0,0.233530684734339,0,0.32833492815819,0.324275238183423,0.146199987425332,0.658650345873152,0.134206418760372,3.36463917702604,17.1850702673405,0,0,0,0.232236671860439,0.257734922644187,0.201683524623343,0.444756087689741,0.380451252225118,0,0.164698954724011,0,0,0.19496408711912,0,0.432276099749388,0,0,0.228497025219458,0,0.407302655690628,0.581857461502877,0.420814919341911,0.316182685621286,0,0,0,0,0,0.196558995113203,0,0,0,0,0.287696137450811,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0,0.947457058852424,0.325929952884052,0.339490171550376,0,0.335012514883631,0.952174563544055,0.390267295715598,0.315270288212382,0.221464689648775,0.318909537314974,0.327726629431476,0,0.144649058581512,0,0,0.491764273019036,0,1.12385412991454,1.75817529888305,0,0.252470927204373,0.315508219416257,0.390438744296638,0.215423397732799,0.716906393857656,0.445597348164788,0,1.21443210502468,0.292255857911312,0.395287777946524,11.2462460747632,0.141940085208269,0.712262414669021,0.977321756121456,0.329940245945071,0,0.242780636154981,0.604647113929502,0.377210159511796,0.590603785761546,0.307435147943927,0,0,1.06949213515416,0.316036757935816,0,0,2.38307724027652,0.36012218806262,0.388076051348264,0.857348140126369,1.06404140185364,0.535106452806212,1.81003922662333,3.34911444026059,0,0.21183207086382,0,0,0.484393280087717,0.180938774784468,0.119372344003136,0,0,0.556275906031529,0,0.412773735926445,0,0,0,0,0.169978429993855,0.279902904647316,0,0,0.474503990371703,1.01659733563424,0,0.418176592028937,0,0,0.0826534557253359,0,0,0,0,0.448549638131936,0.165458490457098,0.583353565032143,0.516639293910924,0,0.58678619322877,0.2604087696879,0.209718688851422,0,0,0,0.202725215290164,0.308132871494482,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0.443971906748129,0,0,0,0,0.549454872801795,0.214368379079066,0.501572104035363,12.9892923801925,11.9684561491866,9.73922372846974,10.998603669996,8.90607275701835,6.0431511791176,6.75022500231806,8.10578165803597,7.25027854374727,6.21312374102184,0,0.399024873401031,0.682934423016537,2.43106717068294,0.838452650511929,1.83843508450014,3.77819437262746,3.09052585858341,3.20919209591815,2.27427490587418,2.5347929989024,3.39527414494937,1.21733959710847,1.92075457214608,1.83793500657962,1.90517476513229,2.43357084484197,2.12200142510076,3.29668720642645,1.76638704161277,2.40008476669791,1.77475806159337,2.62279808942053,2.18019624948493,2.72917203204459,2.70766745253365,1.64635175585495,2.10455769150274,1.90125759384206,1.68342681497322,1.77952527186261,2.46261205938909,0.818462086339379,3.09873682371932,1.92906610981141,5.49583271463481,1.40358965067245,1.71896843238639,1.3390183244819,0.220591419119515,0.231867835620421 | ||
|short_description=p6@Farp1 | |short_description=p6@Farp1 | ||
}} | }} |
Latest revision as of 16:46, 25 September 2015
Short description: | p6@Farp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Farp1_5end |
Coexpression cluster: | MCL_coexpression_mm9:459 |
Association with transcript: | -13bp_to_ENSMUST00000135010_5end |
EntrezGene: | Farp1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.16e-22 | 23 |
neuroblast (sensu Vertebrata) | 9.16e-22 | 23 |
neuron | 5.20e-14 | 33 |
neuronal stem cell | 5.20e-14 | 33 |
neuroblast | 5.20e-14 | 33 |
electrically signaling cell | 5.20e-14 | 33 |
electrically responsive cell | 1.00e-10 | 39 |
electrically active cell | 1.00e-10 | 39 |
neural cell | 4.47e-09 | 43 |
ectodermal cell | 1.03e-08 | 44 |
neurectodermal cell | 1.03e-08 | 44 |
neuron of cerebral cortex | 7.21e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 3.33e-33 | 54 |
gray matter | 2.38e-30 | 34 |
neural tube | 1.26e-29 | 52 |
neural rod | 1.26e-29 | 52 |
future spinal cord | 1.26e-29 | 52 |
neural keel | 1.26e-29 | 52 |
central nervous system | 3.65e-28 | 73 |
nervous system | 5.52e-27 | 75 |
brain | 2.15e-26 | 47 |
future brain | 2.15e-26 | 47 |
anterior neural tube | 3.96e-26 | 40 |
regional part of forebrain | 2.41e-25 | 39 |
forebrain | 2.41e-25 | 39 |
future forebrain | 2.41e-25 | 39 |
regional part of brain | 3.43e-25 | 46 |
brain grey matter | 6.39e-25 | 29 |
regional part of telencephalon | 6.39e-25 | 29 |
telencephalon | 6.39e-25 | 29 |
neurectoderm | 1.71e-21 | 64 |
neural plate | 1.71e-21 | 64 |
presumptive neural plate | 1.71e-21 | 64 |
cerebral cortex | 1.27e-19 | 21 |
cerebral hemisphere | 1.27e-19 | 21 |
pallium | 1.27e-19 | 21 |
pre-chordal neural plate | 3.06e-19 | 49 |
ectoderm-derived structure | 5.33e-18 | 95 |
ectoderm | 5.33e-18 | 95 |
presumptive ectoderm | 5.33e-18 | 95 |
ecto-epithelium | 3.34e-17 | 73 |
regional part of cerebral cortex | 1.15e-15 | 17 |
occipital lobe | 1.16e-12 | 10 |
visual cortex | 1.16e-12 | 10 |
neocortex | 1.16e-12 | 10 |
structure with developmental contribution from neural crest | 4.83e-11 | 92 |