FFCP PHASE1:Hg19::chr2:27886526..27886562,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:27886526..27886562,+
|short_description=p2@SLC4A1AP
|description=CAGE_peak_2_at_SLC4A1AP_5end
|association_with_transcript=188bp_to_ENST00000326019,NM_0181...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22950 | |EntrezGene=22950 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13813 | |HGNC=13813 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BWU0 | |UniProt=Q9BWU0 | ||
|association_with_transcript=188bp_to_ENST00000326019,NM_018158,uc002rlk.3_5end | |||
|cluster_id=chr2:27886526..27886562,+ | |||
|description=CAGE_peak_2_at_SLC4A1AP_5end | |||
|id=chr2:27886526..27886562,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.51e-16!94;UBERON:0001016!3.51e-16!94;UBERON:0001017!9.18e-15!82;UBERON:0005743!1.26e-14!86;UBERON:0001049!5.66e-13!57;UBERON:0005068!5.66e-13!57;UBERON:0006241!5.66e-13!57;UBERON:0007135!5.66e-13!57;UBERON:0003080!9.04e-13!42;UBERON:0002780!1.01e-12!41;UBERON:0001890!1.01e-12!41;UBERON:0006240!1.01e-12!41;UBERON:0000955!5.25e-12!69;UBERON:0006238!5.25e-12!69;UBERON:0004121!1.34e-11!169;UBERON:0000924!1.44e-11!173;UBERON:0006601!1.44e-11!173;UBERON:0003075!1.61e-11!86;UBERON:0007284!1.61e-11!86;UBERON:0002616!1.83e-11!59;UBERON:0001893!2.31e-11!34;UBERON:0002020!2.42e-11!34;UBERON:0003528!2.42e-11!34;UBERON:0003056!2.57e-11!61;UBERON:0002346!2.58e-11!90;UBERON:0002791!7.80e-11!33;UBERON:0000033!9.32e-11!123;UBERON:0001869!1.42e-10!32;UBERON:0000153!1.09e-09!129;UBERON:0007811!1.09e-09!129;UBERON:0000956!1.63e-08!25;UBERON:0000203!1.63e-08!25;UBERON:0002619!1.75e-07!22;UBERON:0000475!2.07e-07!365;UBERON:0001950!6.25e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.30e-15;34!UBERON:0002020;1.30e-15;34!UBERON:0001893;2.08e-15;34!UBERON:0000956;2.95e-15;25!UBERON:0000203;2.95e-15;25!UBERON:0001869;1.63e-14;32!UBERON:0002791;1.91e-14;32!UBERON:0002780;8.04e-14;41!UBERON:0001890;8.04e-14;41!UBERON:0002619;8.54e-13;22!UBERON:0001950;1.80e-12;20!UBERON:0000073;1.63e-11;53!UBERON:0002616;1.63e-11;53!UBERON:0000955;4.27e-08;68!UBERON:0001016;5.15e-08;83!UBERON:0000200;1.30e-07;6!UBERON:0001017;9.68e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003056,5.29e-21,61;UBERON:0001016,7.40e-21,89;UBERON:0002780,1.72e-19,41;UBERON:0001890,1.72e-19,41;UBERON:0003080,1.72e-19,41;UBERON:0006240,1.72e-19,41;UBERON:0001893,3.24e-18,34;UBERON:0003528,3.53e-18,34;UBERON:0002020,3.53e-18,34;UBERON:0000073,4.82e-18,53;UBERON:0002616,4.82e-18,53;UBERON:0001049,1.01e-17,56;UBERON:0005068,1.01e-17,56;UBERON:0006241,1.01e-17,56;UBERON:0007135,1.01e-17,56;UBERON:0003075,1.42e-17,82;UBERON:0007284,1.42e-17,82;UBERON:0001017,2.10e-17,81;UBERON:0000955,1.10e-16,68;UBERON:0006238,1.10e-16,68;UBERON:0001869,1.16e-16,32;UBERON:0002791,2.49e-16,32;UBERON:0002346,3.92e-16,86;UBERON:0000956,2.50e-15,25;UBERON:0000203,2.50e-15,25;UBERON:0002619,3.09e-13,22;UBERON:0001950,6.35e-13,20;UBERON:0010371,1.14e-12,104;UBERON:0004121,7.90e-12,171;UBERON:0000924,7.90e-12,171;UBERON:0006601,7.90e-12,171;UBERON:0010314,4.84e-09,132;UBERON:0000200,5.97e-08,6;UBERON:0011216,1.45e-07,223 | |||
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| ||
|short_description=p2@SLC4A1AP | |||
}} | }} |
Latest revision as of 18:10, 16 September 2015
Short description: | p2@SLC4A1AP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLC4A1AP_5end |
Coexpression cluster: | NA |
Association with transcript: | 188bp_to_ENST00000326019, NM_018158, uc002rlk.3_5end |
EntrezGene: | SLC4A1AP |
HGNC: | 13813 |
UniProt: | Q9BWU0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pre-chordal neural plate | 5.29e-21 | 61 |
nervous system | 7.40e-21 | 89 |
regional part of forebrain | 1.72e-19 | 41 |
forebrain | 1.72e-19 | 41 |
anterior neural tube | 1.72e-19 | 41 |
future forebrain | 1.72e-19 | 41 |
telencephalon | 3.24e-18 | 34 |
brain grey matter | 3.53e-18 | 34 |
gray matter | 3.53e-18 | 34 |
regional part of nervous system | 4.82e-18 | 53 |
regional part of brain | 4.82e-18 | 53 |
neural tube | 1.01e-17 | 56 |
neural rod | 1.01e-17 | 56 |
future spinal cord | 1.01e-17 | 56 |
neural keel | 1.01e-17 | 56 |
neural plate | 1.42e-17 | 82 |
presumptive neural plate | 1.42e-17 | 82 |
central nervous system | 2.10e-17 | 81 |
brain | 1.10e-16 | 68 |
future brain | 1.10e-16 | 68 |
cerebral hemisphere | 1.16e-16 | 32 |
regional part of telencephalon | 2.49e-16 | 32 |
neurectoderm | 3.92e-16 | 86 |
cerebral cortex | 2.50e-15 | 25 |
pallium | 2.50e-15 | 25 |
regional part of cerebral cortex | 3.09e-13 | 22 |
neocortex | 6.35e-13 | 20 |
ecto-epithelium | 1.14e-12 | 104 |
ectoderm-derived structure | 7.90e-12 | 171 |
ectoderm | 7.90e-12 | 171 |
presumptive ectoderm | 7.90e-12 | 171 |
structure with developmental contribution from neural crest | 4.84e-09 | 132 |
gyrus | 5.97e-08 | 6 |
organ system subdivision | 1.45e-07 | 223 |