FFCP PHASE1:Hg19::chr3:154898430..154898445,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:154898430..154898445,+
|short_description=p@chr3:154898430..154898445,+
|description=CAGE_peak_at_chr3:154898430..154898445,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:154898430..154898445,+ | |||
|coexpression_cluster_id=C1514 | |||
|description=CAGE_peak_at_chr3:154898430..154898445,+ | |||
|id=chr3:154898430..154898445,+ | |||
|ontology_enrichment_celltype=CL:0000055!9.54e-14!180;CL:0000057!1.61e-12!75;CL:0002620!5.59e-11!23;CL:0000048!1.06e-08!430;CL:0000723!3.71e-08!436;CL:0000034!1.83e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000775;4.46e-14;3!CL:0002588;8.42e-10;2!CL:0002561;2.91e-09;2!CL:0002559;6.74e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,4.91e-14,3;CL:0002588,8.85e-10,2;CL:0002561,2.33e-09,2;CL:0000136,3.47e-09,15;CL:0002559,5.94e-08,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002199!8.02e-09!45;UBERON:0002416!8.02e-09!45;UBERON:0002097!1.66e-08!40;UBERON:0000914!3.43e-07!83;UBERON:0002329!3.43e-07!83;UBERON:0003077!3.43e-07!83;UBERON:0003059!3.43e-07!83;UBERON:0007282!3.43e-07!83;UBERON:0009618!3.43e-07!83;UBERON:0007285!3.43e-07!83;UBERON:0003102!3.98e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0005933;2.91e-09;2!UBERON:0005942;2.91e-09;2!UBERON:0005932;2.91e-09;2!UBERON:0002073;6.74e-08;5!UBERON:0002199;4.20e-07;46!UBERON:0002416;4.20e-07;46!UBERON:0001013;5.51e-07;14!UBERON:0002097;8.52e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,4.40e-10,46;UBERON:0002416,4.40e-10,46;UBERON:0005933,2.33e-09,2;UBERON:0005942,2.33e-09,2;UBERON:0005932,2.33e-09,2;UBERON:0002073,5.94e-08,5;UBERON:0005086,5.94e-08,5;UBERON:0002097,6.79e-08,41;UBERON:0001013,4.62e-07,14 | |||
|phase1_expression=0.908391896352783,8.34992043174834,0.281908808191942,1.0007329835313,0,0,2.53299878168311,0,1.30592814099919,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0.313454721478088,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0.309868802321207,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0.579386075843295,0,0,0,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0.860234595106124,0.347140501607594,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0.573673241497627,0.709336764396714,0,0,0,0,0.269421344139376,0,0,0,0,0.936480230490962,0.570471821544449,1.79338416662161,0.117434498643765,0.485618833104395,0.561803226808994,0.408308342509787,0.122834317311768,0.103325781175765,0,1.48360157567134,0,0,0.505008341862199,0.125118519871964,0,0,0.30648779579902,0.150238058906597,0,0.538168907066586,1.06778694409284,1.27159140695737,0,0,1.28820270022815,1.11670113798954,0.168776332241266,0.292311015483596,0,1.10459878370759,0.323292113637624,0.355009592516614,0.403008392910561,0,0,0,0,0,0,0,0,0,0,0,1.28648187638577,0,1.39310378409594,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.444485260045183,0,0,0,0.719792448923265,3.60411669412701,0,0,0,0,0.387815147273333,0,1.690605505112,0.26593811658487,0,0.257207374262142,0,0,0.285955987316295,0.542621605391443,0.823240336780769,0.325736184293735,0,3.95975936466715,0,0,0,0,0,0,0,0,0,0.868687840005475,0.61642896765115,0.895304816199478,0,0,0,0,0,0,0,0,0,5.24304916763028,11.966458368161,3.31532410748828,0.12269149171914,0.500170521059677,0,0,0.178428988797162,0.315404830067869,0,0,0,0,0,0,1.73767228936166,0,0,0,0,0,0.303127571446259,0,0.30239029332968,1.48864684691266,0.920771839728375,3.36792113319688,0.256278298511402,1.02341449813341,0.482561763430822,0,0,0,0,1.03850885836724,0.232420756919918,0,0,0,0.114814448164607,1.0925470080403,0.393373244878272,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0.0915694648183434,0.41254749960294,0,0.650060246036521,0,0.290012154876366,0.308097234229289,0.460511024178389,0.275673144969061,1.07420244868274,0.725083469571143,0.255679882248303,0.0890320356467374,0,0,0,0,0.929691098594572,1.25924938732256,0,0,0,0.869932992075073,0,0,0,0,0.762520775695299,0,0.855877976067841,0,0,1.43897966066652,0.823611089208164,0.235624804691373,0,0,0,0,0,0,0.409499734223957,0.989838023675989,0,0,0,0,0,0,0,0,0,3.01163839628508,3.63521451748548,0,0.354761064070598,0.211107635297664,0,0,0,0.0962221127255121,0.670302275535787,0,0.0941438007767792,0,0,0,0,1.01489521846434,0,0,0.476463550915578,0,0.648473311192717,0.540031437238115,0,1.38871292465715,0,0,0,0.577076851905779,0.0711418433484141,0,0,0,0,0,0,0,0,0,0.846458889008016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.47748896947538,0.296964680832639,0.307160702099232,0,0,0.111308705022906,0,0,0.19924798825107,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.46112780877612,0,0,0.957003479195758,0.366390373607449,5.86338253620498,0,0,0,0,0,0,0,0,0.843992258112108,0,0,0,0,0.442287822516696,0,0,0,0,0,0,0,0.364909578431332,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0.693373365065693,0,0,0,0,0,0,0,0,0,0,0,0.274083849293502,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0.271808412147228,0.104602846312333,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0.315222829196793,0.104909176269996,0,0,0,0,0,0,0,0,0.653174720218818,1.19730191562487,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0.828478110694391,0,0,0.121792598380896,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,2.56918800190471,0,0,0,0,0.934853239388898,0.554805861502613,0.378806010550178,1.50940741051545,0,0,0.453692771289717,0.15543720058278,0.147855149989634,0.318593534327405,1.34940933649081,0.155262956876259,0,1.86089200190596,0,0.450772826991655,0,0.406870733204662,0.909243296012797,0.214821114084977,0.464033759878494,1.59238355479446,0.800055529326307,1.03018711554838,1.6837474438296,0,0,0,0,0.226705925512272,0.231522474323834,0,0,0,0,0,0.578742114812744,0,0,0,0.303859956177382,0,0,0,0,0,1.2288645437686,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0.157723490002507,0,1.76337971845342,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,1.18332000730565,1.19298766662821,0.423387050190929,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0.596852325484105,0,0,0,0.301925687133347,0.540219106755613,1.09279780251979,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,2.1161073620616,4.46394021800102,0.462175628631418,0,0,0,0.126698501011437,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.129177819672012,0,0.224263725161227,0.0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| |phase1_expression=0.908391896352783,8.34992043174834,0.281908808191942,1.0007329835313,0,0,2.53299878168311,0,1.30592814099919,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0.313454721478088,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0.309868802321207,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0.579386075843295,0,0,0,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0.860234595106124,0.347140501607594,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0.573673241497627,0.709336764396714,0,0,0,0,0.269421344139376,0,0,0,0,0.936480230490962,0.570471821544449,1.79338416662161,0.117434498643765,0.485618833104395,0.561803226808994,0.408308342509787,0.122834317311768,0.103325781175765,0,1.48360157567134,0,0,0.505008341862199,0.125118519871964,0,0,0.30648779579902,0.150238058906597,0,0.538168907066586,1.06778694409284,1.27159140695737,0,0,1.28820270022815,1.11670113798954,0.168776332241266,0.292311015483596,0,1.10459878370759,0.323292113637624,0.355009592516614,0.403008392910561,0,0,0,0,0,0,0,0,0,0,0,1.28648187638577,0,1.39310378409594,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.444485260045183,0,0,0,0.719792448923265,3.60411669412701,0,0,0,0,0.387815147273333,0,1.690605505112,0.26593811658487,0,0.257207374262142,0,0,0.285955987316295,0.542621605391443,0.823240336780769,0.325736184293735,0,3.95975936466715,0,0,0,0,0,0,0,0,0,0.868687840005475,0.61642896765115,0.895304816199478,0,0,0,0,0,0,0,0,0,5.24304916763028,11.966458368161,3.31532410748828,0.12269149171914,0.500170521059677,0,0,0.178428988797162,0.315404830067869,0,0,0,0,0,0,1.73767228936166,0,0,0,0,0,0.303127571446259,0,0.30239029332968,1.48864684691266,0.920771839728375,3.36792113319688,0.256278298511402,1.02341449813341,0.482561763430822,0,0,0,0,1.03850885836724,0.232420756919918,0,0,0,0.114814448164607,1.0925470080403,0.393373244878272,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0.0915694648183434,0.41254749960294,0,0.650060246036521,0,0.290012154876366,0.308097234229289,0.460511024178389,0.275673144969061,1.07420244868274,0.725083469571143,0.255679882248303,0.0890320356467374,0,0,0,0,0.929691098594572,1.25924938732256,0,0,0,0.869932992075073,0,0,0,0,0.762520775695299,0,0.855877976067841,0,0,1.43897966066652,0.823611089208164,0.235624804691373,0,0,0,0,0,0,0.409499734223957,0.989838023675989,0,0,0,0,0,0,0,0,0,3.01163839628508,3.63521451748548,0,0.354761064070598,0.211107635297664,0,0,0,0.0962221127255121,0.670302275535787,0,0.0941438007767792,0,0,0,0,1.01489521846434,0,0,0.476463550915578,0,0.648473311192717,0.540031437238115,0,1.38871292465715,0,0,0,0.577076851905779,0.0711418433484141,0,0,0,0,0,0,0,0,0,0.846458889008016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.47748896947538,0.296964680832639,0.307160702099232,0,0,0.111308705022906,0,0,0.19924798825107,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.46112780877612,0,0,0.957003479195758,0.366390373607449,5.86338253620498,0,0,0,0,0,0,0,0,0.843992258112108,0,0,0,0,0.442287822516696,0,0,0,0,0,0,0,0.364909578431332,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0.693373365065693,0,0,0,0,0,0,0,0,0,0,0,0.274083849293502,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0.271808412147228,0.104602846312333,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0.315222829196793,0.104909176269996,0,0,0,0,0,0,0,0,0.653174720218818,1.19730191562487,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0.828478110694391,0,0,0.121792598380896,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,2.56918800190471,0,0,0,0,0.934853239388898,0.554805861502613,0.378806010550178,1.50940741051545,0,0,0.453692771289717,0.15543720058278,0.147855149989634,0.318593534327405,1.34940933649081,0.155262956876259,0,1.86089200190596,0,0.450772826991655,0,0.406870733204662,0.909243296012797,0.214821114084977,0.464033759878494,1.59238355479446,0.800055529326307,1.03018711554838,1.6837474438296,0,0,0,0,0.226705925512272,0.231522474323834,0,0,0,0,0,0.578742114812744,0,0,0,0.303859956177382,0,0,0,0,0,1.2288645437686,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0.157723490002507,0,1.76337971845342,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,1.18332000730565,1.19298766662821,0.423387050190929,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0.596852325484105,0,0,0,0.301925687133347,0.540219106755613,1.09279780251979,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,2.1161073620616,4.46394021800102,0.462175628631418,0,0,0,0.126698501011437,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.129177819672012,0,0.224263725161227,0.0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| ||
|short_description=p@chr3:154898430..154898445,+ | |||
}} | }} |
Latest revision as of 17:21, 29 July 2015
Short description: | p@chr3:154898430..154898445, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:154898430..154898445, + |
Coexpression cluster: | C1514_Neutrophils_Adipocyte_tenocyte_chorionic_Hair_Preadipocyte_Mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 4.91e-14 | 3 |
smooth muscle cell of the umbilical vein | 8.85e-10 | 2 |
outer root sheath cell | 2.33e-09 | 2 |
fat cell | 3.47e-09 | 15 |
hair follicle cell | 5.94e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
integument | 4.40e-10 | 46 |
integumental system | 4.40e-10 | 46 |
hair root sheath | 2.33e-09 | 2 |
hair outer root sheath | 2.33e-09 | 2 |
bulb of hair follicle | 2.33e-09 | 2 |
hair follicle | 5.94e-08 | 5 |
hair follicle placode | 5.94e-08 | 5 |
skin of body | 6.79e-08 | 41 |
adipose tissue | 4.62e-07 | 14 |