FFCP PHASE1:Hg19::chr3:55515202..55515209,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:55515202..55515209,-
|short_description=p15@WNT5A
|description=CAGE_peak_15_at_WNT5A_5end
|association_with_transcript=14bp_to_ENST00000482079_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7474 | |EntrezGene=7474 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12784 | |HGNC=12784 | ||
|TSSclassifier=strong | |||
|UniProt=C9J8I8 | |UniProt=C9J8I8 | ||
|association_with_transcript=14bp_to_ENST00000482079_5end | |||
|cluster_id=chr3:55515202..55515209,- | |||
|coexpression_cluster_id=C1516 | |||
|description=CAGE_peak_15_at_WNT5A_5end | |||
|id=chr3:55515202..55515209,- | |||
|ontology_enrichment_celltype=CL:0002620!3.45e-13!23;CL:0000055!4.09e-13!180;CL:0000057!7.64e-11!75;CL:0000548!2.63e-09!679;CL:0000004!2.63e-09!679;CL:0000255!2.63e-09!679;CL:0000012!4.43e-09!682;CL:0000144!3.57e-07!625;CL:0002552!8.56e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000349;2.11e-17;19!CL:0002620;9.67e-17;23!CL:0002559;5.52e-12;5!CL:0000346;6.37e-12;3!CL:1000428;6.37e-12;3!CL:0002537;9.79e-12;5!CL:0002577;1.71e-11;3!CL:0000197;2.27e-10;6!CL:0000098;2.27e-10;6!CL:0002167;2.27e-10;6!CL:0000138;3.76e-10;6!CL:0002536;3.23e-09;2!CL:0002552;2.33e-07;5!CL:0000153;9.05e-07;9!CL:0000447;9.05e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.54e-17,19;CL:0002620,7.41e-17,23;CL:0002559,5.54e-12,5;CL:0000346,7.00e-12,3;CL:1000428,7.00e-12,3;CL:0002537,9.53e-12,5;CL:0002577,1.75e-11,3;CL:0000197,2.39e-10,6;CL:0000098,2.39e-10,6;CL:0002167,2.39e-10,6;CL:0000058,3.35e-10,6;CL:0000138,3.35e-10,6;CL:0000057,9.88e-10,76;CL:0002536,3.24e-09,2;CL:0002552,2.63e-07,5;CL:0000153,8.39e-07,9;CL:0000447,8.39e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!6.41e-08!5;DOID:450!6.41e-08!5;DOID:66!6.41e-08!5;DOID:423!6.41e-08!5;DOID:0080000!6.41e-08!5;DOID:11722!6.41e-08!5;DOID:2394!8.16e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:17;3.69e-18;5!DOID:450;3.69e-18;5!DOID:66;3.69e-18;5!DOID:423;3.69e-18;5!DOID:0080000;3.69e-18;5!DOID:11722;3.69e-18;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.86e-18,5;DOID:450,1.86e-18,5;DOID:66,1.86e-18,5;DOID:423,1.86e-18,5;DOID:0080000,1.86e-18,5;DOID:11722,1.86e-18,5 | |||
|ontology_enrichment_uberon=UBERON:0005631!3.59e-13!14;UBERON:0000158!3.59e-13!14;UBERON:0002097!5.59e-12!40;UBERON:0002199!9.64e-11!45;UBERON:0002416!9.64e-11!45;UBERON:0003102!1.18e-09!95;UBERON:0000478!2.61e-08!24;UBERON:0000305!8.96e-08!7;UBERON:0003124!5.12e-07!7;UBERON:0001737!6.93e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000305;7.50e-19;7!UBERON:0005631;2.72e-17;10!UBERON:0000158;2.72e-17;10!UBERON:0002097;1.26e-13;41!UBERON:0000478;2.35e-13;24!UBERON:0002073;5.52e-12;5!UBERON:0000412;6.37e-12;3!UBERON:0001992;6.37e-12;3!UBERON:0002199;3.95e-09;46!UBERON:0002416;3.95e-09;46!UBERON:0001987;9.95e-09;4!UBERON:0003102;1.37e-08;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.09e-24,14;UBERON:0000158,3.09e-24,14;UBERON:0000305,7.30e-19,7;UBERON:0004871,2.02e-16,8;UBERON:0002097,2.07e-16,41;UBERON:0002199,3.04e-14,46;UBERON:0002416,3.04e-14,46;UBERON:0000478,2.71e-13,24;UBERON:0002073,5.54e-12,5;UBERON:0005086,5.54e-12,5;UBERON:0000412,7.00e-12,3;UBERON:0001992,7.00e-12,3;UBERON:0003102,5.56e-11,99;UBERON:0004923,1.92e-10,66;UBERON:0001987,1.01e-08,4;UBERON:0004340,1.01e-08,4;UBERON:0003124,3.03e-08,7 | |||
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| ||
|short_description=p15@WNT5A | |||
}} | }} |
Latest revision as of 02:55, 19 September 2015
Short description: | p15@WNT5A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_WNT5A_5end |
Coexpression cluster: | C1516_amniotic_Fibroblast_Hair_Amniotic_Placental_Chondrocyte_liposarcoma |
Association with transcript: | 14bp_to_ENST00000482079_5end |
EntrezGene: | WNT5A |
HGNC: | 12784 |
UniProt: | C9J8I8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.54e-17 | 19 |
skin fibroblast | 7.41e-17 | 23 |
hair follicle cell | 5.54e-12 | 5 |
hair follicle dermal papilla cell | 7.00e-12 | 3 |
stem cell of epidermis | 7.00e-12 | 3 |
amnion mesenchymal stem cell | 9.53e-12 | 5 |
placental epithelial cell | 1.75e-11 | 3 |
receptor cell | 2.39e-10 | 6 |
sensory epithelial cell | 2.39e-10 | 6 |
olfactory epithelial cell | 2.39e-10 | 6 |
chondroblast | 3.35e-10 | 6 |
chondrocyte | 3.35e-10 | 6 |
fibroblast | 9.88e-10 | 76 |
amniotic epithelial cell | 3.24e-09 | 2 |
fibroblast of gingiva | 2.63e-07 | 5 |
GAG secreting cell | 8.39e-07 | 9 |
carbohydrate secreting cell | 8.39e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 3.09e-24 | 14 |
membranous layer | 3.09e-24 | 14 |
amnion | 7.30e-19 | 7 |
somatic layer of lateral plate mesoderm | 2.02e-16 | 8 |
skin of body | 2.07e-16 | 41 |
integument | 3.04e-14 | 46 |
integumental system | 3.04e-14 | 46 |
extraembryonic structure | 2.71e-13 | 24 |
hair follicle | 5.54e-12 | 5 |
hair follicle placode | 5.54e-12 | 5 |
dermal papilla | 7.00e-12 | 3 |
papillary layer of dermis | 7.00e-12 | 3 |
surface structure | 5.56e-11 | 99 |
organ component layer | 1.92e-10 | 66 |
placenta | 1.01e-08 | 4 |
allantois | 1.01e-08 | 4 |
chorion | 3.03e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.86e-18 | 5 |
myotonic disease | 1.86e-18 | 5 |
muscle tissue disease | 1.86e-18 | 5 |
myopathy | 1.86e-18 | 5 |
muscular disease | 1.86e-18 | 5 |
myotonic dystrophy | 1.86e-18 | 5 |