FFCP PHASE1:Hg19::chr3:57199333..57199352,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:57199333..57199352,-
|short_description=p2@IL17RD
|description=CAGE_peak_2_at_IL17RD_5end
|association_with_transcript=50bp_to_ENST00000296318,ENST00000479...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54756 | |EntrezGene=54756 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17616 | |HGNC=17616 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NFM7 | |UniProt=Q8NFM7 | ||
|association_with_transcript=50bp_to_ENST00000296318,ENST00000479825,NM_017563,uc003dil.2_5end | |||
|cluster_id=chr3:57199333..57199352,- | |||
|coexpression_cluster_id=C42 | |||
|description=CAGE_peak_2_at_IL17RD_5end | |||
|id=chr3:57199333..57199352,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:1000507;3.55e-07;10!CL:1000494;3.55e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,1.79e-07,10;CL:1000494,1.79e-07,10;CL:0000047,8.25e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.06e-07;10!UBERON:0005564;3.06e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.17e-25!94;UBERON:0001016!5.17e-25!94;UBERON:0007023!7.27e-25!115;UBERON:0005743!6.86e-24!86;UBERON:0001017!7.94e-22!82;UBERON:0003075!1.77e-20!86;UBERON:0007284!1.77e-20!86;UBERON:0000153!2.11e-20!129;UBERON:0007811!2.11e-20!129;UBERON:0000033!4.13e-20!123;UBERON:0000481!4.83e-19!347;UBERON:0002346!5.47e-19!90;UBERON:0004121!1.76e-18!169;UBERON:0000924!1.22e-17!173;UBERON:0006601!1.22e-17!173;UBERON:0001049!3.42e-17!57;UBERON:0005068!3.42e-17!57;UBERON:0006241!3.42e-17!57;UBERON:0007135!3.42e-17!57;UBERON:0000468!4.80e-17!659;UBERON:0002616!7.31e-17!59;UBERON:0000922!1.37e-16!612;UBERON:0000955!1.98e-16!69;UBERON:0006238!1.98e-16!69;UBERON:0003056!1.05e-14!61;UBERON:0000467!1.08e-14!625;UBERON:0000480!1.66e-14!626;UBERON:0000475!7.29e-14!365;UBERON:0000119!9.63e-14!312;UBERON:0002050!1.32e-13!605;UBERON:0005423!1.32e-13!605;UBERON:0000483!1.87e-13!309;UBERON:0000477!2.01e-13!286;UBERON:0000923!3.72e-13!604;UBERON:0005291!3.72e-13!604;UBERON:0006598!3.72e-13!604;UBERON:0002532!3.72e-13!604;UBERON:0000062!5.39e-13!511;UBERON:0003080!5.43e-12!42;UBERON:0002780!1.17e-11!41;UBERON:0001890!1.17e-11!41;UBERON:0006240!1.17e-11!41;UBERON:0000064!4.19e-11!219;UBERON:0004111!7.05e-10!241;UBERON:0003103!2.25e-09!69;UBERON:0000025!3.79e-09!194;UBERON:0001893!4.16e-09!34;UBERON:0002020!5.05e-09!34;UBERON:0003528!5.05e-09!34;UBERON:0002791!8.23e-09!33;UBERON:0001869!2.28e-08!32;UBERON:0003135!5.35e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;1.60e-11;49!UBERON:0003135;2.60e-10;11!UBERON:0000073;3.30e-09;53!UBERON:0002616;3.30e-09;53!UBERON:0002780;1.15e-08;41!UBERON:0001890;1.15e-08;41!UBERON:0007625;3.78e-08;11!UBERON:0007023;8.23e-08;114!UBERON:0003528;1.14e-07;34!UBERON:0002020;1.14e-07;34!UBERON:0001893;1.62e-07;34!UBERON:0001032;1.62e-07;24!UBERON:0004456;1.62e-07;24!UBERON:0002791;1.76e-07;32!UBERON:0001869;2.61e-07;32!UBERON:0000473;2.98e-07;8!UBERON:0004211;3.55e-07;10!UBERON:0009773;3.55e-07;10!UBERON:0001231;3.55e-07;10!UBERON:0004810;3.55e-07;10!UBERON:0001017;4.44e-07;75!UBERON:0000020;4.49e-07;23!UBERON:0001016;5.45e-07;83!UBERON:0002104;7.84e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.43e-26,114;UBERON:0003075,6.66e-23,82;UBERON:0007284,6.66e-23,82;UBERON:0002346,5.12e-21,86;UBERON:0010314,1.11e-20,132;UBERON:0001016,1.11e-19,89;UBERON:0001017,2.60e-19,81;UBERON:0004121,1.27e-18,171;UBERON:0000924,1.27e-18,171;UBERON:0006601,1.27e-18,171;UBERON:0001049,2.13e-16,56;UBERON:0005068,2.13e-16,56;UBERON:0006241,2.13e-16,56;UBERON:0007135,2.13e-16,56;UBERON:0010371,3.90e-16,104;UBERON:0003056,3.87e-15,61;UBERON:0000073,1.82e-14,53;UBERON:0002616,1.82e-14,53;UBERON:0000922,8.22e-14,592;UBERON:0011216,1.66e-13,223;UBERON:0000955,6.38e-13,68;UBERON:0006238,6.38e-13,68;UBERON:0003103,4.61e-11,68;UBERON:0005423,1.25e-10,581;UBERON:0002780,1.78e-10,41;UBERON:0001890,1.78e-10,41;UBERON:0003080,1.78e-10,41;UBERON:0006240,1.78e-10,41;UBERON:0003135,2.48e-10,11;UBERON:0000483,5.41e-09,306;UBERON:0004111,6.27e-09,240;UBERON:0000119,1.14e-08,309;UBERON:0001893,1.75e-08,34;UBERON:0003528,2.20e-08,34;UBERON:0002020,2.20e-08,34;UBERON:0000025,2.30e-08,192;UBERON:0007625,4.49e-08,11;UBERON:0002050,1.36e-07,564;UBERON:0003076,1.43e-07,15;UBERON:0003057,1.43e-07,15;UBERON:0000489,1.55e-07,31;UBERON:0002791,1.59e-07,32;UBERON:0001869,1.67e-07,32;UBERON:0004810,1.79e-07,10;UBERON:0000923,1.87e-07,560;UBERON:0010316,1.87e-07,560;UBERON:0005291,1.87e-07,560;UBERON:0006598,1.87e-07,560;UBERON:0010317,1.87e-07,560;UBERON:0002532,1.87e-07,560;UBERON:0000020,1.93e-07,24;UBERON:0001032,1.93e-07,24;UBERON:0004456,1.93e-07,24;UBERON:0000473,3.14e-07,8;UBERON:0001456,5.51e-07,22 | |||
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| ||
|short_description=p2@IL17RD | |||
}} | }} |
Latest revision as of 04:03, 19 September 2015
Short description: | p2@IL17RD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_IL17RD_5end |
Coexpression cluster: | C42_small_lung_maxillary_pharyngeal_Mesenchymal_Wilms_colon |
Association with transcript: | 50bp_to_ENST00000296318, ENST00000479825, NM_017563, uc003dil.2_5end |
EntrezGene: | IL17RD |
HGNC: | 17616 |
UniProt: | Q8NFM7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 1.79e-07 | 10 |
nephron tubule epithelial cell | 1.79e-07 | 10 |
neuronal stem cell | 8.25e-07 | 8 |