FFCP PHASE1:Hg19::chr9:103235453..103235470,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8577 | |EntrezGene=8577 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11866 | |HGNC=11866 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IYR6 | |UniProt=Q8IYR6 | ||
|association_with_transcript=-49bp_to_NM_003692_5end | |association_with_transcript=-49bp_to_NM_003692_5end | ||
|cluster_id=chr9:103235453..103235470,+ | |||
|coexpression_cluster_id=C4786 | |coexpression_cluster_id=C4786 | ||
|description=CAGE_peak_3_at_TMEFF1_5end | |description=CAGE_peak_3_at_TMEFF1_5end |
Latest revision as of 21:07, 19 September 2015
Short description: | p3@TMEFF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TMEFF1_5end |
Coexpression cluster: | C4786_occipital_H9_parietal_Neural_duodenum_Neurons_temporal |
Association with transcript: | -49bp_to_NM_003692_5end |
EntrezGene: | TMEFF1 |
HGNC: | 11866 |
UniProt: | Q8IYR6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p3@TMEFF1 |
---|
0
5
10
15
20
25
30
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 8.51e-15 | 8 |
neuron | 1.02e-11 | 6 |
neuroblast | 1.02e-11 | 6 |
electrically signaling cell | 1.02e-11 | 6 |
embryonic stem cell | 3.38e-10 | 5 |
neural cell | 1.39e-09 | 25 |
lymphangioblast | 5.93e-09 | 6 |
endothelial cell of lymphatic vessel | 5.93e-09 | 6 |
vascular lymphangioblast | 5.93e-09 | 6 |
germ line cell | 7.19e-08 | 7 |
Showing 1 to 10 of 13 entries
Ontology term | p-value | n |
---|---|---|
nervous system | 1.44e-53 | 89 |
central nervous system | 6.03e-50 | 81 |
neural tube | 7.48e-41 | 56 |
neural rod | 7.48e-41 | 56 |
future spinal cord | 7.48e-41 | 56 |
neural keel | 7.48e-41 | 56 |
regional part of nervous system | 1.05e-36 | 53 |
regional part of brain | 1.05e-36 | 53 |
brain | 3.49e-34 | 68 |
future brain | 3.49e-34 | 68 |
Showing 1 to 10 of 53 entries
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 8.13e-10 | 22 |
germ cell cancer | 8.13e-10 | 22 |
Showing 1 to 2 of 2 entries