FFCP PHASE1:Hg19::chr4:154074217..154074244,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:154074217..154074244,+
|short_description=p5@TRIM2
|description=CAGE_peak_5_at_TRIM2_5end
|association_with_transcript=-25bp_to_ENST00000437508,NM_00113006...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23321 | |EntrezGene=23321 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15974 | |HGNC=15974 | ||
|TSSclassifier=strong | |||
|UniProt=Q9C040 | |UniProt=Q9C040 | ||
|association_with_transcript=-25bp_to_ENST00000437508,NM_001130067,uc003ing.2_5end | |||
|cluster_id=chr4:154074217..154074244,+ | |||
|description=CAGE_peak_5_at_TRIM2_5end | |||
|id=chr4:154074217..154074244,+ | |||
|ontology_enrichment_celltype=CL:0002319!2.61e-07!25;CL:0000133!5.58e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002605;2.72e-09;3!CL:0002319;2.75e-07;25!CL:0002620;4.22e-07;23!CL:0000128;9.05e-07;7!CL:0000126;9.05e-07;7!CL:0000127;9.05e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,6.46e-09,3;CL:0002319,2.80e-07,25;CL:0002620,5.25e-07,23 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.31e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.05e-29!94;UBERON:0001016!1.05e-29!94;UBERON:0005743!1.63e-29!86;UBERON:0001017!6.58e-29!82;UBERON:0001049!1.03e-25!57;UBERON:0005068!1.03e-25!57;UBERON:0006241!1.03e-25!57;UBERON:0007135!1.03e-25!57;UBERON:0000955!6.98e-24!69;UBERON:0006238!6.98e-24!69;UBERON:0002346!1.06e-21!90;UBERON:0002616!1.03e-20!59;UBERON:0003075!2.59e-20!86;UBERON:0007284!2.59e-20!86;UBERON:0002780!1.38e-19!41;UBERON:0001890!1.38e-19!41;UBERON:0006240!1.38e-19!41;UBERON:0003080!9.55e-19!42;UBERON:0001893!6.22e-18!34;UBERON:0002020!7.76e-18!34;UBERON:0003528!7.76e-18!34;UBERON:0002791!3.50e-17!33;UBERON:0003056!7.87e-17!61;UBERON:0000924!1.61e-16!173;UBERON:0006601!1.61e-16!173;UBERON:0001869!2.05e-16!32;UBERON:0000153!6.33e-16!129;UBERON:0007811!6.33e-16!129;UBERON:0000033!8.29e-16!123;UBERON:0000956!1.27e-15!25;UBERON:0000203!1.27e-15!25;UBERON:0004121!2.31e-15!169;UBERON:0002619!1.62e-13!22;UBERON:0001950!5.56e-12!20;UBERON:0007023!3.36e-10!115;UBERON:0003076!3.77e-08!15;UBERON:0003057!3.77e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;4.16e-23;41!UBERON:0001890;4.16e-23;41!UBERON:0000956;1.85e-22;25!UBERON:0000203;1.85e-22;25!UBERON:0001893;1.96e-22;34!UBERON:0000073;3.67e-22;53!UBERON:0002616;3.67e-22;53!UBERON:0003528;2.35e-21;34!UBERON:0002020;2.35e-21;34!UBERON:0001869;2.89e-20;32!UBERON:0002791;3.37e-20;32!UBERON:0001017;2.67e-17;75!UBERON:0002619;1.95e-16;22!UBERON:0000955;6.53e-16;68!UBERON:0001016;2.41e-14;83!UBERON:0001950;1.07e-12;20!UBERON:0001872;2.98e-10;5!UBERON:0002298;3.83e-08;6!UBERON:0002784;2.39e-07;4!UBERON:0001905;3.96e-07;2!UBERON:0002757;3.96e-07;2!UBERON:0010134;3.96e-07;2!UBERON:0005408;3.96e-07;2!UBERON:0001899;3.96e-07;2!UBERON:0001894;5.60e-07;7!UBERON:0001954;9.74e-07;2!UBERON:0003022;9.74e-07;2!UBERON:0002421;9.74e-07;2!UBERON:0002600;9.74e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.03e-42,81;UBERON:0001049,5.87e-39,56;UBERON:0005068,5.87e-39,56;UBERON:0006241,5.87e-39,56;UBERON:0007135,5.87e-39,56;UBERON:0001016,4.10e-37,89;UBERON:0000073,2.34e-35,53;UBERON:0002616,2.34e-35,53;UBERON:0000955,5.53e-35,68;UBERON:0006238,5.53e-35,68;UBERON:0002780,7.72e-31,41;UBERON:0001890,7.72e-31,41;UBERON:0003080,7.72e-31,41;UBERON:0006240,7.72e-31,41;UBERON:0001893,1.67e-25,34;UBERON:0003075,3.38e-24,82;UBERON:0007284,3.38e-24,82;UBERON:0002346,1.02e-22,86;UBERON:0003528,1.05e-22,34;UBERON:0002020,1.05e-22,34;UBERON:0000956,5.66e-22,25;UBERON:0000203,5.66e-22,25;UBERON:0001869,1.86e-21,32;UBERON:0002791,2.08e-21,32;UBERON:0004121,1.43e-19,171;UBERON:0000924,1.43e-19,171;UBERON:0006601,1.43e-19,171;UBERON:0010371,6.30e-19,104;UBERON:0003056,6.55e-19,61;UBERON:0002619,3.44e-16,22;UBERON:0011216,2.07e-14,223;UBERON:0010314,2.52e-14,132;UBERON:0001950,2.57e-12,20;UBERON:0007023,1.24e-11,114;UBERON:0001872,5.10e-10,5;UBERON:0003076,3.14e-09,15;UBERON:0003057,3.14e-09,15;UBERON:0002298,2.54e-08,6;UBERON:0001954,4.26e-07,2;UBERON:0003022,4.26e-07,2;UBERON:0002421,4.26e-07,2;UBERON:0002600,4.26e-07,2;UBERON:0002784,4.38e-07,4;UBERON:0000025,7.52e-07,192;UBERON:0001905,8.24e-07,2;UBERON:0002757,8.24e-07,2;UBERON:0010134,8.24e-07,2;UBERON:0005408,8.24e-07,2;UBERON:0001899,8.24e-07,2 | |||
|phase1_expression=0,0.428201047781966,0.422863212287913,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,1.47745269692145,0.204000691244253,0.940364164434263,1.14494394852423,1.23186982565596,1.12988375635323,0,0,0,0.393364276848904,0,0.154816123316076,0,0,0,0,0,0,0,0.401088894940283,0,0,0,0,0.290796477559129,0,0,0,0.411167888021826,0,0,0,0.236482229888585,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0.316462387440884,0.211255286311942,0,0.419317291016752,0.112328631146495,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24203425192614,0.263384084775077,1.37696839079683,1.17903228824749,0.616804496998528,0,0.32592226663359,1.4203434172042,0,0,0.294605907474837,0.664601683750863,0.541607727530031,0,0.130059347559878,0,0,0,0,0,0,0,0,0.34362744548263,0.253019692019503,0.318565414324097,0,0,0,0.76791966692651,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0.486634870302636,0.661743720148475,0.443458794925128,0.702678285545008,0.196468613246569,0,0,0,0,0,0.238490624305342,0.571994910780128,1.11437250398869,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0.560677600142307,0,0,0,0,0,0.302714855289863,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0,0,0,1.18800285728205,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0,2.51145489964407,0,0,2.10063767259082,0,1.03056216018252,0.18611685633159,2.02531598689519,1.46155507741798,1.26216887122057,0,0,1.06502877754984,1.41052937518696,0.169560592310488,0.193260853163297,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0,0.474541238222193,0.134831308160164,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0.325808305310325,0,0,0.811512834825538,0.117408694235822,0,0,0,0,0,0,0,0,0,0.839910640994298,0.141775097242386,0,0,0,0,0,0,0,0,0.317489471460845,0.381988425558278,0,0,0,0.600686115687835,0.571652865261156,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0.205476322550383,0.716243852959582,0,0,0,0.128343036279748,0.76228387266739,1.30139853857622,0.773288812777695,3.01529277601828,1.27587750330633,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496215615637554,1.68808170616869,0.841980283299221,0.128139149255701,0.511707249066704,0.160853921143607,0,0,0,0,0,0,0,0.40101294060657,0.0920809889358963,0,0,0,0,0.385076685522074,0,0,0.316654886678627,1.13733384070897,0,0.215915916102139,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0,0.328014645699706,0.325378394664303,0,3.84591752237042,3.87794649626764,0,0,1.6068392984416,0,0,0,0,0,0.145016693914229,0,0.0890320356467374,0,0,0.127612712494584,0.10115778085555,0.464845549297286,0.62962469366128,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,1.68471475667626,0,0,0,0,0,0,0.822724546172388,0.648473311192717,0,0,0.106824071127473,0,0,0.743212700502875,0.28853842595289,0.497992903438899,1.59426272728822,0.199579371432817,0,1.90506224451495,0,0.561594356226918,0.912938716132769,0,0,0,0,0,0.425846237690326,0,0,0.223676107892416,0,0,0,0,0,0,0,0.18714054040822,0,0.121360521749513,0,0,0.71623345421307,0.296964680832639,0.921482106297696,0.994147647766298,0.562677665642051,0,0,0,0.398495976502139,0,0,0.102268682502155,0.123084805461069,0,0.269605053441981,0.716084698702437,0,0,0,0,0,1.20598527610407,3.99227596002388,0.520855522170466,0,0,0,0.254253650292766,0,0,0,0.347249989866585,0,0.241192877250816,0,0.663475559587348,0,1.31631238292384,0.32681539055697,0.139423744278603,0.153900517007594,0.113942055847001,0,0,0,0,0,0,2.04386596391473,0,0,0,0,0,0,0,0,0.816164040795739,0,0.432777279484182,0.995261931078505,0.0884575645033392,0,0.296521128680622,0.123563938946503,0.313265848516366,1.88723172345896,0.802577647298789,1.1713222286267,0.182454789215666,0,0,0,0,7.95789180239274,0.063186579628488,0,0,0,0,0,0,0,0.416024019039416,0.694238953340524,0.0979923974143777,0.261177619741208,0,0,0.0967563312890851,0.292357268344742,0.0821154570532092,0.193978032976839,0,0.451961481561065,0,0,1.01297273529406,0,0.0801588202515337,0.213452994739353,0,0.432271251462318,0.687219576995494,0,0,0.124252535565433,0,0,0.104602846312333,0.611989305817931,2.02265412931063,0,0.821432273351958,0,0,0,0,0,0,0,0,0,0.470284307407084,0,0,0,0,0,0,0,1.59045937961861,1.49823746722733,0,0.137539436597234,0,0.2249738915515,0,1.03274246318642,0,0.0788057072991982,0.367182116944987,0,0.35857467866569,0.191915197319445,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,2.06852730178481,0.92562821219883,0.855434189421647,0,0,0,0,0,0.197611631897944,0.121792598380896,0.638341257770182,0,0,0,0,0,0.886068179966986,1.09823638411767,0.876336514945499,1.14681839138014,0.665574309221114,1.55241007353459,1.798532254171,0.37494122388632,1.36484205787483,0.285465333544967,0,0,0.28984205722165,0,0,0,0,0,0,0,0.151230923763239,0,0,0.159296767163702,0.449803112163605,0,0,0,0,0,0,0,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| ||
|short_description=p5@TRIM2 | |||
}} | }} |
Latest revision as of 03:59, 16 September 2015
Short description: | p5@TRIM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TRIM2_5end |
Coexpression cluster: | NA |
Association with transcript: | -25bp_to_ENST00000437508, NM_001130067, uc003ing.2_5end |
EntrezGene: | TRIM2 |
HGNC: | 15974 |
UniProt: | Q9C040 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 6.46e-09 | 3 |
neural cell | 2.80e-07 | 25 |
skin fibroblast | 5.25e-07 | 23 |