FFCP PHASE1:Hg19::chr7:136553339..136553348,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1129 | |EntrezGene=1129 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1951 | |HGNC=1951 | ||
|TSSclassifier=strong | |||
|UniProt=A4D1Q0,P08172,Q6SL56,Q86SJ1 | |UniProt=A4D1Q0,P08172,Q6SL56,Q86SJ1 | ||
|association_with_transcript=-50bp_to_NM_001006627,NM_001006630,uc003vtf.1,uc003vtg.1_5end | |association_with_transcript=-50bp_to_NM_001006627,NM_001006630,uc003vtf.1,uc003vtg.1_5end | ||
|cluster_id=chr7:136553339..136553348,+ | |||
|description=CAGE_peak_11_at_CHRM2_5end | |description=CAGE_peak_11_at_CHRM2_5end | ||
|id=chr7:136553339..136553348,+ | |id=chr7:136553339..136553348,+ |
Latest revision as of 13:48, 16 September 2015
Short description: | p11@CHRM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_CHRM2_5end |
Coexpression cluster: | NA |
Association with transcript: | -50bp_to_NM_001006627, NM_001006630, uc003vtf.1, uc003vtg.1_5end |
EntrezGene: | CHRM2 |
HGNC: | 1951 |
UniProt: | A4D1Q0P08172Q6SL56Q86SJ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p11@CHRM2 |
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0.0
0.5
1.0
1.5
2.0
2.5
3.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stellate cell | 1.09e-10 | 3 |
Showing 1 to 1 of 1 entries
Ontology term | p-value | n |
---|---|---|
heart left ventricle | 1.78e-29 | 1 |
cardiac ventricle | 1.78e-29 | 1 |
future cardiac ventricle | 1.78e-29 | 1 |
cardiac chamber | 8.99e-11 | 3 |
occipital lobe | 4.79e-07 | 5 |
sympathetic nervous system | 6.77e-07 | 5 |
autonomic nervous system | 6.77e-07 | 5 |
Showing 1 to 7 of 7 entries
Ontology term | p-value | n |
---|---|---|
liver cancer | 3.16e-29 | 1 |
teratoma | 1.33e-15 | 2 |
mesenchymal cell neoplasm | 2.37e-15 | 2 |
Showing 1 to 3 of 3 entries