FFCP PHASE1:Hg19::chr4:95128841..95128865,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:95128841..95128865,+
|short_description=p4@SMARCAD1
|description=CAGE_peak_4_at_SMARCAD1_5end
|association_with_transcript=79bp_to_ENST00000359052_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=56916 | |EntrezGene=56916 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18398 | |HGNC=18398 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=79bp_to_ENST00000359052_5end | |||
|cluster_id=chr4:95128841..95128865,+ | |||
|description=CAGE_peak_4_at_SMARCAD1_5end | |||
|id=chr4:95128841..95128865,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.61e-09!57;UBERON:0005068!2.61e-09!57;UBERON:0006241!2.61e-09!57;UBERON:0007135!2.61e-09!57;UBERON:0001017!9.85e-09!82;UBERON:0000073!2.05e-08!94;UBERON:0001016!2.05e-08!94;UBERON:0002616!2.61e-08!59;UBERON:0005743!3.35e-08!86;UBERON:0002020!7.40e-08!34;UBERON:0003528!7.40e-08!34;UBERON:0001869!1.66e-07!32;UBERON:0001893!3.03e-07!34;UBERON:0002791!4.84e-07!33;UBERON:0003080!5.38e-07!42;UBERON:0002780!6.58e-07!41;UBERON:0001890!6.58e-07!41;UBERON:0006240!6.58e-07!41;UBERON:0007023!9.29e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002791;2.27e-07;32!UBERON:0001869;2.98e-07;32!UBERON:0003528;3.87e-07;34!UBERON:0002020;3.87e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.17e-08,56;UBERON:0005068,1.17e-08,56;UBERON:0006241,1.17e-08,56;UBERON:0007135,1.17e-08,56;UBERON:0001016,1.64e-08,89;UBERON:0001017,1.94e-08,81;UBERON:0000073,2.66e-08,53;UBERON:0002616,2.66e-08,53;UBERON:0003528,7.93e-08,34;UBERON:0002020,7.93e-08,34;UBERON:0001869,2.00e-07,32;UBERON:0002791,2.80e-07,32;UBERON:0001893,5.34e-07,34 | |||
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| ||
|short_description=p4@SMARCAD1 | |||
}} | }} |
Latest revision as of 09:53, 19 September 2015
Short description: | p4@SMARCAD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SMARCAD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 79bp_to_ENST00000359052_5end |
EntrezGene: | SMARCAD1 |
HGNC: | 18398 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 1.17e-08 | 56 |
neural rod | 1.17e-08 | 56 |
future spinal cord | 1.17e-08 | 56 |
neural keel | 1.17e-08 | 56 |
nervous system | 1.64e-08 | 89 |
central nervous system | 1.94e-08 | 81 |
regional part of nervous system | 2.66e-08 | 53 |
regional part of brain | 2.66e-08 | 53 |
brain grey matter | 7.93e-08 | 34 |
gray matter | 7.93e-08 | 34 |
cerebral hemisphere | 2.00e-07 | 32 |
regional part of telencephalon | 2.80e-07 | 32 |
telencephalon | 5.34e-07 | 34 |