FFCP PHASE1:Hg19::chr5:131563165..131563186,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:131563165..131563186,-
|short_description=p5@P4HA2
|description=CAGE_peak_5_at_P4HA2_5end
|association_with_transcript=-94bp_to_ENST00000428369_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8974 | |EntrezGene=8974 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8547 | |HGNC=8547 | ||
|TSSclassifier=strong | |||
|UniProt=C9JCP0 | |UniProt=C9JCP0 | ||
|association_with_transcript=-94bp_to_ENST00000428369_5end | |||
|cluster_id=chr5:131563165..131563186,- | |||
|description=CAGE_peak_5_at_P4HA2_5end | |||
|id=chr5:131563165..131563186,- | |||
|ontology_enrichment_celltype=CL:0000055!5.05e-20!180;CL:0000359!6.31e-15!32;CL:0000192!1.03e-12!42;CL:0000514!1.03e-12!42;CL:0000680!1.16e-11!57;CL:0000056!1.16e-11!57;CL:0000355!1.16e-11!57;CL:0000187!7.18e-11!54;CL:0000057!4.00e-10!75;CL:0002539!8.03e-10!10;CL:0000183!1.36e-09!59;CL:0000393!1.30e-08!60;CL:0000211!1.30e-08!60;CL:0000220!6.64e-08!246;CL:0002321!1.22e-07!248;CL:0002334!2.70e-07!12;CL:0000144!7.36e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0000359;6.90e-22;32!CL:0002539;5.52e-18;10!CL:0000192;4.55e-13;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,3.77e-23,32;CL:0000192,5.42e-18,43;CL:0000514,5.42e-18,43;CL:0002539,6.97e-18,10;CL:0000680,2.47e-15,58;CL:0000056,2.47e-15,58;CL:0000355,2.47e-15,58;CL:0000187,4.94e-13,55;CL:0000393,2.68e-11,61;CL:0000211,2.68e-11,61;CL:0000048,2.64e-07,427;CL:0000723,4.93e-07,433 | |||
|ontology_enrichment_development_v019=CL:0000514;4.55e-13;43!CL:0000355;2.90e-08;58 | |||
|ontology_enrichment_disease=DOID:2394!1.30e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.52e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.72e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0000486!3.95e-13!82;UBERON:0004573!4.85e-13!33;UBERON:0004571!4.85e-13!33;UBERON:0001637!2.72e-12!42;UBERON:0003509!2.72e-12!42;UBERON:0004572!2.72e-12!42;UBERON:0001134!5.17e-11!61;UBERON:0002036!5.17e-11!61;UBERON:0003082!5.17e-11!61;UBERON:0004872!7.88e-11!84;UBERON:0002385!8.76e-11!63;UBERON:0001015!8.76e-11!63;UBERON:0000383!8.76e-11!63;UBERON:0000914!8.81e-11!83;UBERON:0002329!8.81e-11!83;UBERON:0003077!8.81e-11!83;UBERON:0003059!8.81e-11!83;UBERON:0007282!8.81e-11!83;UBERON:0009618!8.81e-11!83;UBERON:0007285!8.81e-11!83;UBERON:0000475!1.10e-10!365;UBERON:0004290!1.35e-10!70;UBERON:0004237!8.03e-10!10;UBERON:0004695!8.03e-10!10;UBERON:0002111!8.03e-10!10;UBERON:0004178!8.03e-10!10;UBERON:0005256!4.47e-09!143;UBERON:0002100!5.91e-09!216;UBERON:0001981!1.26e-08!60;UBERON:0007500!1.26e-08!60;UBERON:0004537!1.26e-08!60;UBERON:0006965!1.26e-08!60;UBERON:0003102!2.65e-08!95;UBERON:0003914!1.34e-07!118;UBERON:0000947!1.97e-07!21;UBERON:0010191!1.97e-07!21;UBERON:0002049!2.38e-07!79;UBERON:0007798!2.38e-07!79;UBERON:0001135!5.13e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;5.41e-19;33!UBERON:0004571;5.41e-19;33!UBERON:0004237;5.52e-18;10!UBERON:0004695;5.52e-18;10!UBERON:0002111;5.52e-18;10!UBERON:0004178;5.52e-18;10!UBERON:0001637;4.39e-13;42!UBERON:0003509;4.39e-13;42!UBERON:0004572;4.39e-13;42!UBERON:0000947;2.51e-12;21!UBERON:0010191;2.51e-12;21!UBERON:0001135;1.73e-11;15!UBERON:0002385;1.55e-08;31!UBERON:0001015;1.55e-08;31!UBERON:0000383;1.55e-08;31!UBERON:0007500;4.76e-08;56!UBERON:0001981;4.76e-08;56!UBERON:0004537;4.76e-08;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,3.80e-22,33;UBERON:0004571,3.80e-22,33;UBERON:0001637,3.45e-21,42;UBERON:0003509,3.45e-21,42;UBERON:0004572,3.45e-21,42;UBERON:0004237,6.97e-18,10;UBERON:0004695,6.97e-18,10;UBERON:0002111,6.97e-18,10;UBERON:0004178,6.97e-18,10;UBERON:0004872,8.59e-16,83;UBERON:0001134,1.27e-15,62;UBERON:0002036,1.27e-15,62;UBERON:0003082,1.27e-15,62;UBERON:0002385,5.82e-15,64;UBERON:0001015,5.82e-15,64;UBERON:0000383,5.82e-15,64;UBERON:0002329,1.80e-14,71;UBERON:0003059,1.80e-14,71;UBERON:0007282,1.80e-14,71;UBERON:0004290,1.80e-14,71;UBERON:0009618,1.80e-14,71;UBERON:0000486,3.10e-14,83;UBERON:0003077,3.44e-14,72;UBERON:0007285,3.44e-14,72;UBERON:0007524,6.46e-14,73;UBERON:0007500,1.32e-13,59;UBERON:0001981,1.32e-13,59;UBERON:0004537,1.32e-13,59;UBERON:0006965,1.32e-13,59;UBERON:0007503,1.17e-12,78;UBERON:0000947,2.81e-12,21;UBERON:0010191,2.81e-12,21;UBERON:0001135,2.01e-11,15;UBERON:0000055,3.72e-11,68;UBERON:0002049,4.06e-09,78;UBERON:0007798,4.06e-09,78;UBERON:0000926,4.26e-08,315;UBERON:0004120,4.26e-08,315;UBERON:0006603,4.26e-08,315;UBERON:0005256,9.52e-08,122;UBERON:0004535,1.28e-07,109;UBERON:0001009,2.82e-07,112;UBERON:0003914,9.49e-07,117 | |||
|phase1_expression=0.54503513781167,0.214100523890983,1.12763523276777,0,0.893922188854576,0,0,1.26343974685366,0.261185628199839,0.982935746006035,0,0.655324116390517,0.527533956456907,0.247532705920093,0,2.6893005858071,2.41077811209591,0.730310090387373,0.975865597581014,0.123121058076788,0.408001382488506,0.940364164434263,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,1.00267582127178,0.434539556882471,0.795285947051099,1.45990461090791,0.472674085820339,0.443458794925128,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,1.49091585508596,0.25326102332916,3.57504788195691,2.29469296599051,0.709336764396714,0,1.06748995729705,0.74000264525148,0,0.269421344139376,0.490385709340376,0.151357427644931,0,0,0,0,0.149448680551801,0.117434498643765,0,0,0,0.122834317311768,0.103325781175765,0,0.494533858557114,0,0.718618141816238,0,0,0,0,0,0.150238058906597,0.226864366320042,0.89694817844431,0,0.423863802319124,3.30100205692843,0.412210116953756,0.257640540045629,0.18611685633159,1.85653965465393,1.26668106709558,1.51460264546469,0.552299391853796,0.484938170456436,0.355009592516614,1.10827308050404,0,1.54608682530637,3.27295344709002,0.860413786167011,0,0,0.116193942869518,0.10366105501537,0,0,3.12899064659632,0.643240938192885,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0.8231480226628,0,0,0,0,0,0,0.171567810298526,0.329250856225877,0,0,0.185176890317059,1.3032332212413,1.03993478527958,0,0,0.352226082707465,0,0,0,0,0,0,0,0,2.81201501960331,2.18376766658517,0.992425680696705,0.53735113621709,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0.646358578788889,0,0,0,0,0.257207374262142,0,0,0.428933980974443,3.7983512377401,0,0,0.710783897485092,0,0.602878754119172,0.871533458600294,0.899756920638513,0,0,0,0,0,0,1.59259437334337,0,1.79060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315404830067869,0,0.902838299183157,0,2.0694614258501,0,0.553107505625109,0.260650843404249,0,0,0,0,0,0.909382714338778,3.32870879020994,1.20956117331872,0.992431231275107,1.38115775959256,0.561320188866147,1.15325234330131,0.511707249066704,1.76939313257968,1.48418066444991,0.308419387605311,1.24293207719189,0.246381468041427,0,0.813472649219715,0,1.80455823272956,0.552485933615378,0.68888668898764,0.546273504020151,0.393373244878272,0,0.15403067420883,0,0,0.422206515571503,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.206082023295445,0.183138929636687,0.165018999841176,0.574265537996172,0,1.6068392984416,0.290012154876366,0.462145851343933,0.15350367472613,0,0,0,0,0.534192213880424,0.991709492165869,1.15314040419064,0.638063562472921,0.50578890427775,2.32422774648643,9.75918275174984,1.3940745403212,2.15623506123262,1.06461206063404,3.47973196830029,0.9266210955196,1.86062352764589,0,0.632758849437452,0,0,0,0.318203247925937,3.92474320099615,0.179872457583315,0,0,2.83055474202642,0,2.10629228119491,0,0.974853958525138,4.22600587027022,0.409499734223957,0.707027159768564,0,0,3.3171948762061,1.75380354101505,0,0,4.05820753925408,0.6196469961995,0,0.143411352204052,0.294747123039363,4.9933947207375,1.06428319221179,0.422215270595328,0.658589785919804,0,0.349934720244983,0.0962221127255121,0,1.08890984861323,0.0941438007767792,0.43050537267123,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593929361665277,0.921482106297696,0,0,0.222617410045812,0,0,0.398495976502139,0,0,0,0,0.933118762985422,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.1137934482855,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0.21787692703798,0.278847488557207,0.153900517007594,0.113942055847001,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.176915129006678,0,0.296521128680622,0,0,0.067401132980677,1.60515529459758,0,0,0,0,0,0,0,0.063186579628488,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0.213452994739353,0.19980960958213,0,0,0,0,0,0.235694034616795,0,0,0.101998217636322,0,0,0,0,0,0,0.558564802544508,0,0,0,0.858452096273142,0.446342914883745,0,0.720599767084807,0,0,0.0824158583811665,0.0674035438541849,0,0,0,0.136203406111576,0,0,0,0,0,0,0.335434687599266,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,5.18532894720761,2.28611152076586,0,0,1.36310417428337,0.226624183040251,0.146552233678082,0,0.129282956361551,0,0.171086837884329,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0,0,0,0,0.18628920882415,0,0,0.151649117541648,0,0.941063278792687,0,0,0.74627401443437,0.467426619694449,0.554805861502613,0.378806010550178,0,1.77962244319307,3.66144109435078,0.756154618816195,0.777186002913902,1.77426179987561,0.63718706865481,5.84744045812686,0.776314784381297,1.244118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| ||
|short_description=p5@P4HA2 | |||
}} | }} |
Latest revision as of 04:28, 20 September 2015
Short description: | p5@P4HA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_P4HA2_5end |
Coexpression cluster: | NA |
Association with transcript: | -94bp_to_ENST00000428369_5end |
EntrezGene: | P4HA2 |
HGNC: | 8547 |
UniProt: | C9JCP0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 3.77e-23 | 32 |
smooth muscle cell | 5.42e-18 | 43 |
smooth muscle myoblast | 5.42e-18 | 43 |
aortic smooth muscle cell | 6.97e-18 | 10 |
muscle precursor cell | 2.47e-15 | 58 |
myoblast | 2.47e-15 | 58 |
multi-potent skeletal muscle stem cell | 2.47e-15 | 58 |
muscle cell | 4.94e-13 | 55 |
electrically responsive cell | 2.68e-11 | 61 |
electrically active cell | 2.68e-11 | 61 |
multi fate stem cell | 2.64e-07 | 427 |
somatic stem cell | 4.93e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.72e-09 | 14 |