FFCP PHASE1:Hg19::chr5:175964142..175964156,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:175964142..175964156,-
|short_description=p10@RNF44
|description=CAGE_peak_10_at_RNF44_5end
|association_with_transcript=140bp_to_ENST00000504160_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22838 | |EntrezGene=22838 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19180 | |HGNC=19180 | ||
|TSSclassifier=strong | |||
|UniProt=D6RAW5 | |UniProt=D6RAW5 | ||
|association_with_transcript=140bp_to_ENST00000504160_5end | |||
|cluster_id=chr5:175964142..175964156,- | |||
|description=CAGE_peak_10_at_RNF44_5end | |||
|id=chr5:175964142..175964156,- | |||
|ontology_enrichment_celltype=CL:0000066!1.63e-10!254;CL:0002076!4.93e-09!43;CL:0000223!3.73e-07!59;CL:0002251!7.75e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0002251;1.89e-08;20!CL:0002076;6.01e-08;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.02e-10,253;CL:0002076,4.32e-10,42;CL:0002251,9.50e-09,20;CL:0000223,1.14e-08,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!5.15e-16!235;DOID:14566!4.10e-15!239;DOID:305!1.68e-13!106;DOID:0050687!5.09e-12!143;DOID:0050686!6.77e-09!137;DOID:1749!8.05e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;2.17e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:162,9.77e-14,235;DOID:14566,4.35e-13,239;DOID:305,5.15e-12,106;DOID:0050687,5.45e-10,143;DOID:0050686,5.69e-08,137;DOID:1749,3.34e-07,14 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p10@RNF44 | |||
}} | }} |
Latest revision as of 04:28, 17 September 2015
Short description: | p10@RNF44 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_RNF44_5end |
Coexpression cluster: | NA |
Association with transcript: | 140bp_to_ENST00000504160_5end |
EntrezGene: | RNF44 |
HGNC: | 19180 |
UniProt: | D6RAW5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.02e-10 | 253 |
endo-epithelial cell | 4.32e-10 | 42 |
epithelial cell of alimentary canal | 9.50e-09 | 20 |
endodermal cell | 1.14e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
cancer | 9.77e-14 | 235 |
disease of cellular proliferation | 4.35e-13 | 239 |
carcinoma | 5.15e-12 | 106 |
cell type cancer | 5.45e-10 | 143 |
organ system cancer | 5.69e-08 | 137 |
squamous cell carcinoma | 3.34e-07 | 14 |