FFCP PHASE1:Hg19::chr5:176433565..176433576,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:176433565..176433576,-
|short_description=p5@UIMC1
|description=CAGE_peak_5_at_UIMC1_5end
|association_with_transcript=0bp_to_ENST00000428382_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51720 | |EntrezGene=51720 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30298 | |HGNC=30298 | ||
|TSSclassifier=strong | |||
|UniProt=D6R9M3 | |UniProt=D6R9M3 | ||
|association_with_transcript=0bp_to_ENST00000428382_5end | |||
|cluster_id=chr5:176433565..176433576,- | |||
|description=CAGE_peak_5_at_UIMC1_5end | |||
|id=chr5:176433565..176433576,- | |||
|ontology_enrichment_celltype=CL:0002139!2.74e-09!24 | |||
|ontology_enrichment_celltype_v019=CL:0002139;4.50e-10;24!CL:0000071;8.10e-10;18!CL:0002322;8.86e-10;5!CL:0000775;5.57e-08;3!CL:0002618;2.21e-07;3!CL:0000115;7.37e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,2.79e-10,24;CL:0000071,3.93e-10,18;CL:0002546,3.93e-10,18;CL:0002322,1.99e-09,5;CL:0000115,3.27e-08,36;CL:0000775,5.50e-08,3;CL:0002618,2.42e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;8.10e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;8.10e-10;18!UBERON:0001986;8.10e-10;18!UBERON:0004852;8.10e-10;18!UBERON:0000487;3.02e-09;22!UBERON:0006914;7.76e-08;25!UBERON:0000490;5.12e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,3.93e-10,18;UBERON:0001986,3.93e-10,18;UBERON:0004852,3.93e-10,18;UBERON:0000487,1.48e-09,22;UBERON:0006914,4.22e-08,25 | |||
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|short_description=p5@UIMC1 | |||
}} | }} |
Latest revision as of 05:24, 17 September 2015
Short description: | p5@UIMC1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_UIMC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000428382_5end |
EntrezGene: | UIMC1 |
HGNC: | 30298 |
UniProt: | D6R9M3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 2.79e-10 | 24 |
blood vessel endothelial cell | 3.93e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.93e-10 | 18 |
embryonic stem cell | 1.99e-09 | 5 |
endothelial cell | 3.27e-08 | 36 |
neutrophil | 5.50e-08 | 3 |
endothelial cell of umbilical vein | 2.42e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 3.93e-10 | 18 |
endothelium | 3.93e-10 | 18 |
cardiovascular system endothelium | 3.93e-10 | 18 |
simple squamous epithelium | 1.48e-09 | 22 |
squamous epithelium | 4.22e-08 | 25 |