FFCP PHASE1:Hg19::chr10:112632638..112632677,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27250 | |EntrezGene=27250 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=8763 | |HGNC=8763 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=85bp_to_BX537500_5end | |association_with_transcript=85bp_to_BX537500_5end | ||
|cluster_id=chr10:112632638..112632677,+ | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_10_at_PDCD4_5end | |description=CAGE_peak_10_at_PDCD4_5end |
Latest revision as of 09:20, 16 September 2015
Short description: | p10@PDCD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_PDCD4_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 85bp_to_BX537500_5end |
EntrezGene: | PDCD4 |
HGNC: | 8763 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p10@PDCD4 |
---|
0
5
10
15
20
25
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 9.84e-28 | 177 |
hematopoietic stem cell | 1.03e-25 | 168 |
leukocyte | 4.35e-22 | 136 |
hematopoietic oligopotent progenitor cell | 6.40e-22 | 161 |
hematopoietic multipotent progenitor cell | 6.40e-22 | 161 |
lymphocyte | 7.71e-19 | 53 |
common lymphoid progenitor | 7.71e-19 | 53 |
lymphoid lineage restricted progenitor cell | 2.01e-17 | 52 |
nongranular leukocyte | 1.07e-14 | 115 |
hematopoietic lineage restricted progenitor cell | 7.59e-14 | 120 |
Showing 1 to 10 of 29 entries
Ontology term | p-value | n |
---|---|---|
blood | 1.17e-07 | 15 |
haemolymphatic fluid | 1.17e-07 | 15 |
organism substance | 1.17e-07 | 15 |
Showing 1 to 3 of 3 entries
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 7.62e-12 | 51 |
immune system cancer | 7.62e-12 | 51 |
lymphoma | 3.01e-08 | 10 |
leukemia | 3.32e-07 | 39 |
Showing 1 to 4 of 4 entries