FFCP PHASE1:Hg19::chr5:66307148..66307152,-: Difference between revisions
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|id=chr5:66307148..66307152,-
|short_description=p@chr5:66307148..66307152,-
|description=CAGE_peak_at_chr5:66307148..66307152,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:66307148..66307152,- | |||
|coexpression_cluster_id=C1489 | |||
|description=CAGE_peak_at_chr5:66307148..66307152,- | |||
|id=chr5:66307148..66307152,- | |||
|ontology_enrichment_celltype=CL:0000181!5.56e-23!12;CL:0000417!5.56e-23!12;CL:0000668!5.56e-23!12;CL:0000414!5.56e-23!12;CL:0000412!5.56e-23!12;CL:0000182!5.56e-23!12;CL:0000223!2.68e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.61e-15;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.74e-15,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;8.57e-17;11!UBERON:0009497;2.55e-14;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.34e-25!19;UBERON:0006925!2.34e-25!19;UBERON:0008836!2.34e-25!19;UBERON:0008835!9.29e-22!22;UBERON:0003894!9.29e-22!22;UBERON:0009854!9.11e-21!23;UBERON:0007499!5.07e-19!25;UBERON:0009497!5.07e-19!25;UBERON:0000015!5.07e-19!25;UBERON:0002423!5.07e-19!25;UBERON:0006235!5.07e-19!25;UBERON:0004161!5.07e-19!25;UBERON:0005057!3.00e-18!26;UBERON:0009856!3.00e-18!26;UBERON:0002368!1.14e-16!35;UBERON:0002365!3.92e-15!31;UBERON:0002330!3.92e-15!31;UBERON:0000160!7.32e-13!27;UBERON:0003929!9.78e-13!54;UBERON:0000949!1.15e-12!45;UBERON:0000059!1.44e-11!11;UBERON:0004921!9.79e-11!129;UBERON:0004185!9.79e-11!129;UBERON:0005172!4.13e-10!55;UBERON:0005173!4.13e-10!55;UBERON:0004119!4.85e-10!169;UBERON:0000925!4.85e-10!169;UBERON:0006595!4.85e-10!169;UBERON:0005409!7.94e-10!35;UBERON:0001007!8.51e-10!155;UBERON:0001555!8.51e-10!155;UBERON:0007026!8.51e-10!155;UBERON:0002530!2.45e-09!59;UBERON:0002417!5.55e-09!61;UBERON:0000916!5.55e-09!61;UBERON:0001155!2.10e-08!9;UBERON:0005911!7.76e-08!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;4.03e-26;19!UBERON:0006925;4.03e-26;19!UBERON:0002423;6.45e-20;25!UBERON:0002108;9.55e-17;4!UBERON:0002365;4.60e-16;31!UBERON:0002330;4.60e-16;31!UBERON:0002368;6.28e-13;33!UBERON:0000160;1.32e-10;17!UBERON:0000949;5.08e-10;43!UBERON:0005409;1.98e-08;22!UBERON:0001007;2.43e-07;81!UBERON:0005172;8.97e-07;52!UBERON:0005173;8.97e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.14e-26,19;UBERON:0006925,4.14e-26,19;UBERON:0008836,4.14e-26,19;UBERON:0008835,1.38e-22,22;UBERON:0003894,1.38e-22,22;UBERON:0009854,1.28e-21,23;UBERON:0007499,6.57e-20,25;UBERON:0009497,6.57e-20,25;UBERON:0000015,6.57e-20,25;UBERON:0002423,6.57e-20,25;UBERON:0006235,6.57e-20,25;UBERON:0004161,6.57e-20,25;UBERON:0009856,3.75e-19,26;UBERON:0002108,8.82e-17,4;UBERON:0002365,4.25e-16,31;UBERON:0002330,4.25e-16,31;UBERON:0002368,2.80e-14,35;UBERON:0000949,3.87e-11,45;UBERON:0000160,1.28e-10,17;UBERON:0004921,2.53e-10,118;UBERON:0003929,2.67e-09,54;UBERON:0005172,2.67e-09,54;UBERON:0005173,2.67e-09,54;UBERON:0002530,1.62e-08,59;UBERON:0002417,2.24e-08,60;UBERON:0000916,2.24e-08,60;UBERON:0001007,2.47e-08,145;UBERON:0001555,2.47e-08,145;UBERON:0007026,2.47e-08,145;UBERON:0005409,1.56e-07,25;UBERON:0004119,1.64e-07,160;UBERON:0000925,1.64e-07,160;UBERON:0006595,1.64e-07,160 | |||
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|short_description=p@chr5:66307148..66307152,- | |||
}} | }} |
Latest revision as of 15:50, 30 July 2015
Short description: | p@chr5:66307148..66307152, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:66307148..66307152, - |
Coexpression cluster: | C1489_colon_Hepatocyte_liver_small_adenocarcinoma_hepatocellular_duodenum |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.74e-15 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 4.14e-26 | 19 |
digestive gland | 4.14e-26 | 19 |
liver bud | 4.14e-26 | 19 |
hepatic diverticulum | 1.38e-22 | 22 |
liver primordium | 1.38e-22 | 22 |
digestive tract diverticulum | 1.28e-21 | 23 |
epithelial sac | 6.57e-20 | 25 |
epithelium of foregut-midgut junction | 6.57e-20 | 25 |
anatomical boundary | 6.57e-20 | 25 |
hepatobiliary system | 6.57e-20 | 25 |
foregut-midgut junction | 6.57e-20 | 25 |
septum transversum | 6.57e-20 | 25 |
sac | 3.75e-19 | 26 |
small intestine | 8.82e-17 | 4 |
exocrine gland | 4.25e-16 | 31 |
exocrine system | 4.25e-16 | 31 |
endocrine gland | 2.80e-14 | 35 |
endocrine system | 3.87e-11 | 45 |
intestine | 1.28e-10 | 17 |
subdivision of digestive tract | 2.53e-10 | 118 |
gut epithelium | 2.67e-09 | 54 |
abdomen element | 2.67e-09 | 54 |
abdominal segment element | 2.67e-09 | 54 |
gland | 1.62e-08 | 59 |
abdominal segment of trunk | 2.24e-08 | 60 |
abdomen | 2.24e-08 | 60 |
digestive system | 2.47e-08 | 145 |
digestive tract | 2.47e-08 | 145 |
primitive gut | 2.47e-08 | 145 |
gastrointestinal system | 1.56e-07 | 25 |
endoderm-derived structure | 1.64e-07 | 160 |
endoderm | 1.64e-07 | 160 |
presumptive endoderm | 1.64e-07 | 160 |