FFCP PHASE1:Hg19::chr5:71403323..71403340,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:71403323..71403340,+
|short_description=p3@MAP1B
|description=CAGE_peak_3_at_MAP1B_5end
|association_with_transcript=10bp_to_ENST00000511641_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4131 | |EntrezGene=4131 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6836 | |HGNC=6836 | ||
|TSSclassifier=strong | |||
|UniProt=D6RA32 | |UniProt=D6RA32 | ||
|association_with_transcript=10bp_to_ENST00000511641_5end | |||
|cluster_id=chr5:71403323..71403340,+ | |||
|coexpression_cluster_id=C257 | |||
|description=CAGE_peak_3_at_MAP1B_5end | |||
|id=chr5:71403323..71403340,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.23e-26!180;CL:0000057!8.11e-13!75;CL:0000393!2.54e-11!60;CL:0000211!2.54e-11!60;CL:0000222!1.18e-10!119;CL:0000680!3.75e-10!57;CL:0000056!3.75e-10!57;CL:0000355!3.75e-10!57;CL:0000359!1.02e-09!32;CL:0000187!1.95e-09!54;CL:0000183!1.18e-08!59;CL:0000192!4.77e-08!42;CL:0000514!4.77e-08!42;CL:0002319!7.23e-08!25;CL:0002321!7.82e-08!248;CL:0000220!1.43e-07!246;CL:0000133!2.08e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.57e-09;32!CL:0002319;5.39e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.97e-13,76;CL:0000393,1.04e-11,61;CL:0000211,1.04e-11,61;CL:0000222,6.08e-11,121;CL:0000680,1.65e-10,58;CL:0000056,1.65e-10,58;CL:0000355,1.65e-10,58;CL:0000359,6.04e-10,32;CL:0000187,8.98e-10,55;CL:0000192,2.43e-08,43;CL:0000514,2.43e-08,43;CL:0002319,4.82e-08,25;CL:0002321,2.78e-07,250;CL:0000133,4.54e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.41e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001869;1.84e-18;32!UBERON:0003528;3.15e-18;34!UBERON:0002020;3.15e-18;34!UBERON:0001893;6.05e-18;34!UBERON:0002791;6.74e-18;32!UBERON:0002780;2.05e-17;41!UBERON:0001890;2.05e-17;41!UBERON:0000956;1.02e-16;25!UBERON:0000203;1.02e-16;25!UBERON:0000073;1.80e-16;53!UBERON:0002616;1.80e-16;53!UBERON:0002619;1.50e-15;22!UBERON:0000955;3.45e-15;68!UBERON:0001017;1.22e-14;75!UBERON:0001950;2.53e-14;20!UBERON:0001016;6.82e-14;83!UBERON:0004573;3.09e-09;33!UBERON:0004571;3.09e-09;33!UBERON:0001637;1.74e-08;42!UBERON:0003509;1.74e-08;42!UBERON:0004572;1.74e-08;42!UBERON:0010314;5.42e-07;132!UBERON:0000947;6.53e-07;21!UBERON:0010191;6.53e-07;21 | |||
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| ||
|short_description=p3@MAP1B | |||
}} | }} |
Latest revision as of 13:43, 18 September 2015
Short description: | p3@MAP1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MAP1B_5end |
Coexpression cluster: | C257_pineal_insula_frontal_occipital_temporal_medial_paracentral |
Association with transcript: | 10bp_to_ENST00000511641_5end |
EntrezGene: | MAP1B |
HGNC: | 6836 |
UniProt: | D6RA32 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.97e-13 | 76 |
electrically responsive cell | 1.04e-11 | 61 |
electrically active cell | 1.04e-11 | 61 |
mesodermal cell | 6.08e-11 | 121 |
muscle precursor cell | 1.65e-10 | 58 |
myoblast | 1.65e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.65e-10 | 58 |
vascular associated smooth muscle cell | 6.04e-10 | 32 |
muscle cell | 8.98e-10 | 55 |
smooth muscle cell | 2.43e-08 | 43 |
smooth muscle myoblast | 2.43e-08 | 43 |
neural cell | 4.82e-08 | 25 |
embryonic cell | 2.78e-07 | 250 |
neurectodermal cell | 4.54e-07 | 59 |