FFCP PHASE1:Hg19::chr5:71494196..71494211,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:71494196..71494211,+
|short_description=p33@MAP1B
|description=CAGE_peak_33_at_MAP1B_5end
|association_with_transcript=142bp_to_AF085863_5end
|EntrezGene=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4131 | |EntrezGene=4131 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=6836 | |HGNC=6836 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=142bp_to_AF085863_5end | |||
|cluster_id=chr5:71494196..71494211,+ | |||
|coexpression_cluster_id=C284 | |||
|description=CAGE_peak_33_at_MAP1B_5end | |||
|id=chr5:71494196..71494211,+ | |||
|ontology_enrichment_celltype=CL:0000055!7.69e-14!180;CL:0000057!1.61e-09!75;CL:0002620!8.56e-07!23 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.14e-21!57;UBERON:0005068!7.14e-21!57;UBERON:0006241!7.14e-21!57;UBERON:0007135!7.14e-21!57;UBERON:0001017!1.83e-20!82;UBERON:0000073!9.92e-20!94;UBERON:0001016!9.92e-20!94;UBERON:0005743!2.52e-19!86;UBERON:0000955!3.24e-18!69;UBERON:0006238!3.24e-18!69;UBERON:0002780!3.32e-17!41;UBERON:0001890!3.32e-17!41;UBERON:0006240!3.32e-17!41;UBERON:0002020!1.14e-16!34;UBERON:0003528!1.14e-16!34;UBERON:0003080!1.87e-16!42;UBERON:0001893!2.80e-16!34;UBERON:0003075!4.38e-16!86;UBERON:0007284!4.38e-16!86;UBERON:0002616!6.51e-16!59;UBERON:0002791!1.33e-15!33;UBERON:0001869!2.36e-15!32;UBERON:0000475!1.16e-14!365;UBERON:0002346!1.99e-14!90;UBERON:0000956!4.51e-13!25;UBERON:0000203!4.51e-13!25;UBERON:0003056!7.05e-13!61;UBERON:0000025!9.07e-13!194;UBERON:0002619!1.99e-11!22;UBERON:0004121!1.80e-10!169;UBERON:0000033!1.83e-10!123;UBERON:0001950!3.88e-10!20;UBERON:0000483!5.58e-10!309;UBERON:0000119!8.44e-10!312;UBERON:0000924!1.18e-09!173;UBERON:0006601!1.18e-09!173;UBERON:0000153!1.91e-09!129;UBERON:0007811!1.91e-09!129;UBERON:0004111!2.95e-09!241;UBERON:0007023!1.90e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;3.59e-24;25!UBERON:0000203;3.59e-24;25!UBERON:0002619;1.36e-23;22!UBERON:0001950;6.19e-22;20!UBERON:0003528;3.53e-18;34!UBERON:0002020;3.53e-18;34!UBERON:0002791;8.73e-18;32!UBERON:0001869;8.77e-18;32!UBERON:0001893;3.44e-15;34!UBERON:0001872;8.77e-14;5!UBERON:0002780;5.45e-12;41!UBERON:0001890;5.45e-12;41!UBERON:0000073;8.22e-11;53!UBERON:0002616;8.22e-11;53!UBERON:0000955;6.87e-08;68!UBERON:0001017;1.17e-07;75!UBERON:0000200;5.36e-07;6!UBERON:0002298;9.78e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,4.24e-24,25;UBERON:0000203,4.24e-24,25;UBERON:0002619,1.59e-23,22;UBERON:0001950,9.04e-22,20;UBERON:0003528,6.99e-20,34;UBERON:0002020,6.99e-20,34;UBERON:0002791,2.33e-18,32;UBERON:0001869,2.33e-18,32;UBERON:0000073,5.68e-18,53;UBERON:0002616,5.68e-18,53;UBERON:0001893,3.85e-17,34;UBERON:0001049,8.21e-17,56;UBERON:0005068,8.21e-17,56;UBERON:0006241,8.21e-17,56;UBERON:0007135,8.21e-17,56;UBERON:0001017,1.04e-16,81;UBERON:0000955,1.21e-16,68;UBERON:0006238,1.21e-16,68;UBERON:0002780,4.77e-16,41;UBERON:0001890,4.77e-16,41;UBERON:0003080,4.77e-16,41;UBERON:0006240,4.77e-16,41;UBERON:0001016,1.40e-14,89;UBERON:0001872,1.20e-13,5;UBERON:0003075,1.13e-11,82;UBERON:0007284,1.13e-11,82;UBERON:0003056,2.15e-11,61;UBERON:0002346,6.01e-11,86;UBERON:0010314,1.54e-09,132;UBERON:0010371,1.61e-09,104;UBERON:0000025,4.39e-08,192;UBERON:0004121,8.05e-08,171;UBERON:0000924,8.05e-08,171;UBERON:0006601,8.05e-08,171;UBERON:0000200,6.74e-07,6 | |||
|phase1_expression=0.726713517082227,1.49870366723688,0.563817616383885,2.00146596706261,0,0,0,0.631719873426831,0.522371256399677,0,0,0.218441372130172,0.527533956456907,0,0,0,0.602694528023977,0.730310090387373,0.487932798790507,0,0,0,0.286235987131057,1.23186982565596,0.87879847716362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,1.0843174571537,0.50133791063589,0.289693037921647,0,0,0.378139268656271,0.443458794925128,0.175669571386252,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0.419499436209906,1.10047216776027,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0.81014194788176,0,0,0,0,0,0.549605231791222,0,0,0,0,0.506522046658319,0.397227542439656,0.573673241497627,0.354668382198357,0,1.06748995729705,0.24666754841716,0,0.538842688278752,0.326923806226917,0,0,0.234321431833797,0.312160076830321,0.570471821544449,0.448346041655403,0.352303495931295,0.485618833104395,0.421352420106746,0,0.122834317311768,0,0,1.7308685049499,0,0,0.168336113954066,0.750711119231785,0,0,0,0.150238058906597,0.226864366320042,0.179389635688862,1.06778694409284,0.423863802319124,0,0.309157587715317,0.515281080091258,0.37223371266318,0.168776332241266,0.487185025805993,0.504867548488229,0.276149695926898,0.323292113637624,0.355009592516614,0.302256294682921,0.339121184620975,0,0.272746120590835,0,0.121973706129595,0.132529768321485,0.116193942869518,0.414644220061482,0.252320850875628,0.72995471815166,0,1.28648187638577,0,0,0.721879481669586,0,0.168584690078102,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0.343135620597051,0.109750285408626,0,0,0,0,1.03993478527958,0,0.463721619900307,0.117408694235822,0.144366447761074,0.462985512576611,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,1.14596527667483,0,1.71072446022705,0.205654985406647,0,0,0,0,0.1466765716419,0,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0.542621605391443,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0.723906533337896,0.205476322550383,0.179060963239896,0,0,0,0,0,0,2.31986643833309,1.00509759200609,0.637938751653163,0,0,0,0,0.500170521059677,0.542530047399471,0.623912584592421,2.14114786556594,0.315404830067869,0.585707074963566,0.300946099727719,0,0,0,0.184369168541703,0.434418072340414,0,0,0,0,0,0,0,0.30239029332968,0.744323423456331,0.61384789315225,1.12264037773229,0.512556597022804,0,1.12597744800525,0,0.925258162815933,0,0.246381468041427,0.519254429183621,0.232420756919918,0,0,0.184161977871793,0.114814448164607,0.182091168006717,0.393373244878272,0,0.15403067420883,0,0,0,1.13733384070897,0,0.647747748306418,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0.307007349452259,0.137836572484531,0.214840489736547,0.290033387828457,0.511359764496605,0.356128142586949,0.165284915360978,0.192190067365106,0,0.2023155617111,2.32422774648643,1.25924938732256,0,0.308033580176089,0,0,0,0,0,0,0,0,0.42793898803392,0,0.78494864019923,0.179872457583315,0.274537029736055,0.235624804691373,0,1.58510321173008,0.421258456238981,0,0.243713489631284,0,0,0.424216295861138,0,0.551365343546124,0.66343897524122,1.31535265576129,0,0,0,0,0.563391205064483,0.430234056612155,0.294747123039363,0.7133421029625,0,0.633322905892992,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.284136146806413,0,0,0,2.98244294329889,0.281338832821026,0,0,0,0.796991953004279,0,0,0.20453736500431,0,1.24415835064723,0,0.179021174675609,0,0.197286811273867,0,0,0.969332746095218,1.29875337426592,1.99613798001194,0.260427761085233,0,0,0,0,0,0.344743373241465,0,0.694499979733169,0,0.241192877250816,0,0.995213339381022,0.591095237907095,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0,0.167821586975843,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0.337005664903385,0,0.468528891450678,0,0,0,0,0,1.83643656978294,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0.171986032471617,0,0,0,0.0969890164884194,0,0.677942222341597,0,0,1.01297273529406,0,0.240476460754601,0,0.39961921916426,0,0,0.514784993585894,0,0.124252535565433,0,0.271808412147228,0.209205692624666,0.305994652908965,0,0.600420288709789,0.410716136675979,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0.223171457441873,0,1.08089965062721,0,0,0,0.0674035438541849,0.0984274815147488,0,1.59045937961861,0.544813624446302,0.321506296930038,0,0,0,0,0.303747783290123,0,0,0,0,0,0,1.42939065274673,0,0,0.542999601753713,1.72844298240254,0.979762080328227,0,0,0.340776043570843,0.226624183040251,0,0,0.904980694530854,1.05786081394152,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0.157054096250234,2.65820453990096,8.66386480803938,0.876336514945499,1.72022758707021,0.998361463831671,0.807253238237985,0.138348634936231,0.37494122388632,0,0,0.235265819698172,0.936669811613763,0.28984205722165,0.1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| ||
|short_description=p33@MAP1B | |||
}} | }} |
Latest revision as of 14:34, 18 September 2015
Short description: | p33@MAP1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_33_at_MAP1B_5end |
Coexpression cluster: | C284_parietal_occipital_medial_temporal_olfactory_locus_hippocampus |
Association with transcript: | 142bp_to_AF085863_5end |
EntrezGene: | MAP1B |
HGNC: | 6836 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebral cortex | 4.24e-24 | 25 |
pallium | 4.24e-24 | 25 |
regional part of cerebral cortex | 1.59e-23 | 22 |
neocortex | 9.04e-22 | 20 |
brain grey matter | 6.99e-20 | 34 |
gray matter | 6.99e-20 | 34 |
regional part of telencephalon | 2.33e-18 | 32 |
cerebral hemisphere | 2.33e-18 | 32 |
regional part of nervous system | 5.68e-18 | 53 |
regional part of brain | 5.68e-18 | 53 |
telencephalon | 3.85e-17 | 34 |
neural tube | 8.21e-17 | 56 |
neural rod | 8.21e-17 | 56 |
future spinal cord | 8.21e-17 | 56 |
neural keel | 8.21e-17 | 56 |
central nervous system | 1.04e-16 | 81 |
brain | 1.21e-16 | 68 |
future brain | 1.21e-16 | 68 |
regional part of forebrain | 4.77e-16 | 41 |
forebrain | 4.77e-16 | 41 |
anterior neural tube | 4.77e-16 | 41 |
future forebrain | 4.77e-16 | 41 |
nervous system | 1.40e-14 | 89 |
parietal lobe | 1.20e-13 | 5 |
neural plate | 1.13e-11 | 82 |
presumptive neural plate | 1.13e-11 | 82 |
pre-chordal neural plate | 2.15e-11 | 61 |
neurectoderm | 6.01e-11 | 86 |
structure with developmental contribution from neural crest | 1.54e-09 | 132 |
ecto-epithelium | 1.61e-09 | 104 |
tube | 4.39e-08 | 192 |
ectoderm-derived structure | 8.05e-08 | 171 |
ectoderm | 8.05e-08 | 171 |
presumptive ectoderm | 8.05e-08 | 171 |
gyrus | 6.74e-07 | 6 |