FFCP PHASE1:Hg19::chr6:52774478..52774499,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:52774478..52774499,-
|short_description=p1@GSTA3
|description=CAGE_peak_1_at_GSTA3_5end
|association_with_transcript=0bp_to_ENST00000211122,NM_000847,uc003...") |
No edit summary |
||
(13 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2940 | |EntrezGene=2940 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4628 | |HGNC=4628 | ||
|TSSclassifier=strong | |||
|UniProt=Q16772 | |UniProt=Q16772 | ||
|association_with_transcript=0bp_to_ENST00000211122,NM_000847,uc003pbb.2,uc010jzq.2_5end | |||
|cluster_id=chr6:52774478..52774499,- | |||
|coexpression_cluster_id=C34 | |||
|description=CAGE_peak_1_at_GSTA3_5end | |||
|id=chr6:52774478..52774499,- | |||
|ontology_enrichment_celltype=CL:0002541!6.09e-10!3;CL:0000039!4.92e-07!7;CL:0000586!4.92e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0002541;1.86e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,2.03e-12,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;8.87e-14;10!UBERON:0005564;8.87e-14;10!UBERON:0003124;3.74e-10;1!UBERON:0000358;1.20e-09;1!UBERON:0004874;1.99e-09;1!UBERON:0008947;6.37e-07;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.84e-15!115;UBERON:0003135!5.61e-13!11;UBERON:0000476!6.09e-10!3;UBERON:0000920!6.09e-10!3;UBERON:0001896!1.39e-09!3;UBERON:0005290!1.39e-09!3;UBERON:0010096!1.39e-09!3;UBERON:0000473!1.89e-09!8;UBERON:0003101!1.39e-07!22;UBERON:0000079!1.39e-07!22;UBERON:0003124!2.22e-07!7;UBERON:0003127!3.66e-07!2;UBERON:0000341!4.38e-07!2;UBERON:0000369!5.35e-07!4;UBERON:0002435!5.35e-07!4;UBERON:0000204!5.35e-07!4;UBERON:0010082!5.35e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0003135;5.26e-19;11!UBERON:0003124;1.86e-12;3!UBERON:0000920;1.86e-12;3!UBERON:0000473;3.92e-10;8!UBERON:0001301;6.59e-10;1!UBERON:0003101;1.96e-09;22!UBERON:0000079;1.96e-09;22!UBERON:0000989;1.99e-09;1!UBERON:0002171;1.99e-09;1!UBERON:0008811;1.99e-09;1!UBERON:0006518;1.99e-09;1!UBERON:0008949;1.99e-09;1!UBERON:0000101;1.99e-09;1!UBERON:0002167;1.99e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003135,5.16e-19,11;UBERON:0000920,2.03e-12,3;UBERON:0003124,1.06e-11,7;UBERON:0000473,3.98e-10,8;UBERON:0001301,5.79e-10,1;UBERON:0002171,1.62e-09,1;UBERON:0006518,1.62e-09,1;UBERON:0008949,1.62e-09,1;UBERON:0000101,1.62e-09,1;UBERON:0002167,1.62e-09,1;UBERON:0003101,1.94e-09,22;UBERON:0000079,1.94e-09,22;UBERON:0000989,2.08e-09,1;UBERON:0008811,2.08e-09,1;UBERON:0006258,2.08e-09,1;UBERON:0005876,2.08e-09,1;UBERON:0004874,2.08e-09,1;UBERON:0003133,7.10e-08,48;UBERON:0007023,5.33e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63723844372141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339121184620975,0,0,0,0,0.132529768321485,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.31710916013264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.4865618636356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.6278709289453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,1.41832609060762,0,0,0,0.885741385813839,0.120596438625408,0,0,0.295547618953547,1.09692698576986,0,0,0.153900517007594,0,0,0,2.28159481036217,6.06102203490647,0.183195186803725,9.59462596833542,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0.943615861729479,0,0,0,0,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0,6.81434006143918,0,0,0,0,0,0,0,0,0,0.0633107959558787,0.782205530939212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,2.32140586367385,0,0.670869375198532,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0.113312091520126,0,0,0.258565912723101,0,0,0,1.38823636338003,8.17462386518263,1.65695622138878,0,0,0,0,0,0,0,0,0,0,0,0,2.86704597845036,0.776503360757966,0.18628920882415,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513833800771676,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,3.53488543241509,0,0,0,0,0,0,0,0,0,0,0,1.48863353516788,0,0,0,0,0,0,46.9235538160359,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0.500335809236594,0,0,0,0,0,0,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0.437062287854782,0,0.305966489225945,0.26721740526556,3.40011128278926,0,6.51696804676859,6.43113912374828,0,0.103432995861895,0.639701945702943,1.90451545170992,0,0.0620747142958579,0,0,0,0.653150243690884,0,0.0673520530145875,1.57788851863888,0.99798106963804,0,0.106727345877715,0,0,2.34640942403454,0.122241444182866,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63723844372141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339121184620975,0,0,0,0,0.132529768321485,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.31710916013264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.4865618636356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.6278709289453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,1.41832609060762,0,0,0,0.885741385813839,0.120596438625408,0,0,0.295547618953547,1.09692698576986,0,0,0.153900517007594,0,0,0,2.28159481036217,6.06102203490647,0.183195186803725,9.59462596833542,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0.943615861729479,0,0,0,0,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0,6.81434006143918,0,0,0,0,0,0,0,0,0,0.0633107959558787,0.782205530939212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,2.32140586367385,0,0.670869375198532,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0.113312091520126,0,0,0.258565912723101,0,0,0,1.38823636338003,8.17462386518263,1.65695622138878,0,0,0,0,0,0,0,0,0,0,0,0,2.86704597845036,0.776503360757966,0.18628920882415,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513833800771676,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,3.53488543241509,0,0,0,0,0,0,0,0,0,0,0,1.48863353516788,0,0,0,0,0,0,46.9235538160359,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0.500335809236594,0,0,0,0,0,0,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0.437062287854782,0,0.305966489225945,0.26721740526556,3.40011128278926,0,6.51696804676859,6.43113912374828,0,0.103432995861895,0.639701945702943,1.90451545170992,0,0.0620747142958579,0,0,0,0.653150243690884,0,0.0673520530145875,1.57788851863888,0.99798106963804,0,0.106727345877715,0,0,2.34640942403454,0.122241444182866,0.406896178315738,0,0,0 | ||
|short_description=p1@GSTA3 | |||
}} | }} |
Latest revision as of 06:36, 19 September 2015
Short description: | p1@GSTA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GSTA3_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | 0bp_to_ENST00000211122, NM_000847, uc003pbb.2, uc010jzq.2_5end |
EntrezGene: | GSTA3 |
HGNC: | 4628 |
UniProt: | Q16772 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 2.03e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
male reproductive organ | 5.16e-19 | 11 |
egg chorion | 2.03e-12 | 3 |
chorion | 1.06e-11 | 7 |
testis | 3.98e-10 | 8 |
epididymis | 5.79e-10 | 1 |
lower lobe of right lung | 1.62e-09 | 1 |
right lung lobe | 1.62e-09 | 1 |
lower lobe of lung | 1.62e-09 | 1 |
lobe of lung | 1.62e-09 | 1 |
right lung | 1.62e-09 | 1 |
male organism | 1.94e-09 | 22 |
male reproductive system | 1.94e-09 | 22 |
penis | 2.08e-09 | 1 |
intromittent organ | 2.08e-09 | 1 |
lateral plate mesenchyme | 2.08e-09 | 1 |
undifferentiated genital tubercle | 2.08e-09 | 1 |
somatopleure | 2.08e-09 | 1 |
reproductive organ | 7.10e-08 | 48 |
adult organism | 5.33e-07 | 114 |