Personal tools

FFCP PHASE1:Hg19::chr3:128203047..128203053,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DPIdataset=robustDPI
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=2624
|EntrezGene=2624
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript
|HGNC=4171
|HGNC=4171
|TSSclassifier=W
|TSSclassifier=strong
|UniProt=
|UniProt=
|association_with_transcript=450bp_to_AK127845_5end
|association_with_transcript=450bp_to_AK127845_5end
|cluster_id=chr3:128203047..128203053,-
|coexpression_cluster_id=C45
|coexpression_cluster_id=C45
|description=CAGE_peak_25_at_GATA2_5end
|description=CAGE_peak_25_at_GATA2_5end

Latest revision as of 06:47, 20 September 2015

Short description:p25@GATA2
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_25_at_GATA2_5end
Coexpression cluster:C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS
Association with transcript: 450bp_to_AK127845_5end
EntrezGene:GATA2
HGNC: 4171
UniProt: NA
Genome view:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




0.0
0.5
1.0
1.5
2.0
2.5
3.0




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data