FFCP PHASE1:Hg19::chr4:106816320..106816337,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=255743 | |EntrezGene=255743 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=27405 | |HGNC=27405 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=Q6UXI9 | |UniProt=Q6UXI9 | ||
|association_with_transcript=-256bp_to_ENST00000379987_5end | |association_with_transcript=-256bp_to_ENST00000379987_5end | ||
|cluster_id=chr4:106816320..106816337,+ | |||
|description=CAGE_peak_9_at_NPNT_5end | |description=CAGE_peak_9_at_NPNT_5end | ||
|id=chr4:106816320..106816337,+ | |id=chr4:106816320..106816337,+ |
Latest revision as of 06:48, 20 September 2015
Short description: | p9@NPNT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_NPNT_5end |
Coexpression cluster: | NA |
Association with transcript: | -256bp_to_ENST00000379987_5end |
EntrezGene: | NPNT |
HGNC: | 27405 |
UniProt: | Q6UXI9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p9@NPNT |
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0.0
1.0
2.0
3.0
4.0
5.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 9.07e-18 | 2 |
mammary gland epithelial cell | 1.12e-09 | 4 |
keratinocyte | 6.55e-08 | 5 |
stratified squamous epithelial cell | 8.48e-07 | 6 |
keratin accumulating cell | 8.48e-07 | 6 |
stratified epithelial cell | 8.48e-07 | 6 |
keratinizing barrier epithelial cell | 8.48e-07 | 6 |
epithelial fate stem cell | 8.48e-07 | 6 |
stratified epithelial stem cell | 8.48e-07 | 6 |
surface ectodermal cell | 8.48e-07 | 6 |
Showing 1 to 10 of 10 entries
Ontology term | p-value | n |
---|---|---|
breast | 2.49e-14 | 10 |
chest | 4.00e-13 | 11 |
mammary gland | 1.12e-09 | 4 |
mammary bud | 1.12e-09 | 4 |
mammary ridge | 1.12e-09 | 4 |
mammary placode | 1.12e-09 | 4 |
uterine cervix | 8.97e-07 | 6 |
neck of organ | 8.97e-07 | 6 |
Showing 1 to 8 of 8 entries
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 4.28e-34 | 4 |
breast cancer | 4.28e-34 | 4 |
cervical cancer | 7.01e-08 | 5 |
Showing 1 to 3 of 3 entries