FFCP PHASE1:Hg19::chr7:23145366..23145443,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:23145366..23145443,+
|short_description=p1@KLHL7
|description=CAGE_peak_1_at_KLHL7_5end
|association_with_transcript=0bp_to_ENST00000322275,ENST00000339077...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55975 | |EntrezGene=55975 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15646 | |HGNC=15646 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IXQ5,E5RFN1,B7Z4N7,B7Z3P9 | |UniProt=Q8IXQ5,E5RFN1,B7Z4N7,B7Z3P9 | ||
|association_with_transcript=0bp_to_ENST00000322275,ENST00000339077,ENST00000459661,ENST00000479288,ENST00000521082,ENST00000539124,ENST00000542558_5end | |||
|cluster_id=chr7:23145366..23145443,+ | |||
|description=CAGE_peak_1_at_KLHL7_5end | |||
|id=chr7:23145366..23145443,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.04e-19!94;UBERON:0001016!3.04e-19!94;UBERON:0001017!5.73e-19!82;UBERON:0005743!3.00e-18!86;UBERON:0000955!1.01e-13!69;UBERON:0006238!1.01e-13!69;UBERON:0000924!4.72e-13!173;UBERON:0006601!4.72e-13!173;UBERON:0004121!9.43e-13!169;UBERON:0001869!4.49e-12!32;UBERON:0001049!5.82e-12!57;UBERON:0005068!5.82e-12!57;UBERON:0006241!5.82e-12!57;UBERON:0007135!5.82e-12!57;UBERON:0002780!9.16e-12!41;UBERON:0001890!9.16e-12!41;UBERON:0006240!9.16e-12!41;UBERON:0001893!1.10e-11!34;UBERON:0002616!1.32e-11!59;UBERON:0002020!2.07e-11!34;UBERON:0003528!2.07e-11!34;UBERON:0003080!3.49e-11!42;UBERON:0002791!3.71e-11!33;UBERON:0000956!4.90e-11!25;UBERON:0000203!4.90e-11!25;UBERON:0000033!7.57e-11!123;UBERON:0002346!1.37e-10!90;UBERON:0000153!2.21e-10!129;UBERON:0007811!2.21e-10!129;UBERON:0003075!2.33e-10!86;UBERON:0007284!2.33e-10!86;UBERON:0002619!4.90e-10!22;UBERON:0001950!1.86e-09!20;UBERON:0003056!8.63e-09!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;4.56e-11;32!UBERON:0000956;5.22e-11;25!UBERON:0000203;5.22e-11;25!UBERON:0001893;1.44e-10;34!UBERON:0002791;2.53e-10;32!UBERON:0003528;2.77e-10;34!UBERON:0002020;2.77e-10;34!UBERON:0002619;4.91e-10;22!UBERON:0001950;1.86e-09;20!UBERON:0002780;1.63e-08;41!UBERON:0001890;1.63e-08;41!UBERON:0000073;1.75e-07;53!UBERON:0002616;1.75e-07;53!UBERON:0000955;2.56e-07;68!UBERON:0001017;4.73e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.91e-20,89;UBERON:0001017,1.65e-19,81;UBERON:0000955,3.36e-14,68;UBERON:0006238,3.36e-14,68;UBERON:0004121,3.28e-13,171;UBERON:0000924,3.28e-13,171;UBERON:0006601,3.28e-13,171;UBERON:0001049,1.86e-12,56;UBERON:0005068,1.86e-12,56;UBERON:0006241,1.86e-12,56;UBERON:0007135,1.86e-12,56;UBERON:0000073,3.21e-12,53;UBERON:0002616,3.21e-12,53;UBERON:0001869,4.49e-12,32;UBERON:0002780,9.16e-12,41;UBERON:0001890,9.16e-12,41;UBERON:0003080,9.16e-12,41;UBERON:0006240,9.16e-12,41;UBERON:0001893,1.10e-11,34;UBERON:0003528,2.07e-11,34;UBERON:0002020,2.07e-11,34;UBERON:0002791,3.98e-11,32;UBERON:0000956,4.90e-11,25;UBERON:0000203,4.90e-11,25;UBERON:0002346,3.39e-10,86;UBERON:0002619,4.90e-10,22;UBERON:0003075,5.72e-10,82;UBERON:0007284,5.72e-10,82;UBERON:0001950,1.86e-09,20;UBERON:0010371,5.97e-09,104;UBERON:0010314,8.14e-09,132;UBERON:0003056,1.01e-08,61;UBERON:0011216,2.64e-08,223 | |||
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7075229 | ||
|short_description=p1@KLHL7 | |||
}} | }} |
Latest revision as of 20:00, 17 September 2015
Short description: | p1@KLHL7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KLHL7_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000322275, ENST00000339077, ENST00000459661, ENST00000479288, ENST00000521082, ENST00000539124, ENST00000542558_5end |
EntrezGene: | KLHL7 |
HGNC: | 15646 |
UniProt: | Q8IXQ5E5RFN1B7Z4N7B7Z3P9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 1.91e-20 | 89 |
central nervous system | 1.65e-19 | 81 |
brain | 3.36e-14 | 68 |
future brain | 3.36e-14 | 68 |
ectoderm-derived structure | 3.28e-13 | 171 |
ectoderm | 3.28e-13 | 171 |
presumptive ectoderm | 3.28e-13 | 171 |
neural tube | 1.86e-12 | 56 |
neural rod | 1.86e-12 | 56 |
future spinal cord | 1.86e-12 | 56 |
neural keel | 1.86e-12 | 56 |
regional part of nervous system | 3.21e-12 | 53 |
regional part of brain | 3.21e-12 | 53 |
cerebral hemisphere | 4.49e-12 | 32 |
regional part of forebrain | 9.16e-12 | 41 |
forebrain | 9.16e-12 | 41 |
anterior neural tube | 9.16e-12 | 41 |
future forebrain | 9.16e-12 | 41 |
telencephalon | 1.10e-11 | 34 |
brain grey matter | 2.07e-11 | 34 |
gray matter | 2.07e-11 | 34 |
regional part of telencephalon | 3.98e-11 | 32 |
cerebral cortex | 4.90e-11 | 25 |
pallium | 4.90e-11 | 25 |
neurectoderm | 3.39e-10 | 86 |
regional part of cerebral cortex | 4.90e-10 | 22 |
neural plate | 5.72e-10 | 82 |
presumptive neural plate | 5.72e-10 | 82 |
neocortex | 1.86e-09 | 20 |
ecto-epithelium | 5.97e-09 | 104 |
structure with developmental contribution from neural crest | 8.14e-09 | 132 |
pre-chordal neural plate | 1.01e-08 | 61 |
organ system subdivision | 2.64e-08 | 223 |