FFCP PHASE1:Hg19::chr7:32338614..32338633,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:32338614..32338633,-
|short_description=p13@PDE1C
|description=CAGE_peak_13_at_PDE1C_5end
|association_with_transcript=-231bp_to_NM_001191058_5end
|Entrez...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5137 | |EntrezGene=5137 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8776 | |HGNC=8776 | ||
|TSSclassifier=strong | |||
|UniProt=E9PE92,Q14123,Q8NB10 | |UniProt=E9PE92,Q14123,Q8NB10 | ||
|association_with_transcript=-231bp_to_NM_001191058_5end | |||
|cluster_id=chr7:32338614..32338633,- | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_13_at_PDE1C_5end | |||
|id=chr7:32338614..32338633,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;4.30e-21;4!UBERON:0007284;4.30e-21;4!UBERON:0003056;3.25e-13;3!UBERON:0006601;4.14e-11;82!UBERON:0006238;4.03e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.73e-58!115;UBERON:0003075!1.02e-33!86;UBERON:0007284!1.02e-33!86;UBERON:0005743!2.40e-33!86;UBERON:0001049!5.44e-32!57;UBERON:0005068!5.44e-32!57;UBERON:0006241!5.44e-32!57;UBERON:0007135!5.44e-32!57;UBERON:0001017!8.65e-32!82;UBERON:0003080!9.11e-32!42;UBERON:0002346!1.24e-31!90;UBERON:0000073!1.92e-30!94;UBERON:0001016!1.92e-30!94;UBERON:0002780!3.64e-30!41;UBERON:0001890!3.64e-30!41;UBERON:0006240!3.64e-30!41;UBERON:0000955!6.82e-30!69;UBERON:0006238!6.82e-30!69;UBERON:0002616!1.72e-28!59;UBERON:0003056!5.86e-28!61;UBERON:0001893!8.73e-27!34;UBERON:0001869!1.37e-26!32;UBERON:0002791!3.16e-25!33;UBERON:0002020!2.23e-24!34;UBERON:0003528!2.23e-24!34;UBERON:0000956!2.03e-23!25;UBERON:0000203!2.03e-23!25;UBERON:0004121!8.77e-23!169;UBERON:0000924!6.75e-22!173;UBERON:0006601!6.75e-22!173;UBERON:0002619!8.67e-22!22;UBERON:0001950!1.12e-21!20;UBERON:0000153!2.63e-21!129;UBERON:0007811!2.63e-21!129;UBERON:0000033!1.35e-20!123;UBERON:0000064!7.73e-10!219;UBERON:0000062!3.32e-09!511;UBERON:0001871!7.00e-09!7;UBERON:0000200!1.61e-08!6;UBERON:0000025!3.33e-08!194;UBERON:0003978!1.05e-07!3;UBERON:0009751!1.05e-07!3;UBERON:0000946!1.05e-07!3;UBERON:0002523!1.05e-07!3;UBERON:0005983!1.05e-07!3;UBERON:0002165!1.05e-07!3;UBERON:0002062!1.05e-07!3;UBERON:0007280!1.05e-07!3;UBERON:0000481!2.27e-07!347;UBERON:0000467!5.13e-07!625;UBERON:0000922!5.58e-07!612;UBERON:0000480!5.73e-07!626;UBERON:0001872!7.80e-07!5;UBERON:0002021!7.80e-07!5;UBERON:0000468!8.08e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;6.81e-28;3!UBERON:0000946;6.81e-28;3!UBERON:0001905;5.32e-20;2!UBERON:0002757;5.32e-20;2!UBERON:0010134;5.32e-20;2!UBERON:0005408;5.32e-20;2!UBERON:0001899;5.32e-20;2!UBERON:0002133;2.48e-19;2!UBERON:0001950;4.14e-15;20!UBERON:0002619;9.24e-14;22!UBERON:0000956;3.99e-12;25!UBERON:0000203;3.99e-12;25!UBERON:0002791;6.95e-12;32!UBERON:0001869;6.95e-12;32!UBERON:0001017;2.18e-11;75!UBERON:0002780;4.91e-11;41!UBERON:0001890;4.91e-11;41!UBERON:0002135;9.82e-11;1!UBERON:0003528;1.11e-10;34!UBERON:0002020;1.11e-10;34!UBERON:0003296;1.81e-10;4!UBERON:0010133;1.81e-10;4!UBERON:0002784;1.81e-10;4!UBERON:0001882;2.38e-10;1!UBERON:0002022;2.38e-10;1!UBERON:0002146;2.38e-10;1!UBERON:0002134;2.38e-10;1!UBERON:0005208;2.38e-10;1!UBERON:0005623;2.38e-10;1!UBERON:0004145;2.38e-10;1!UBERON:0005946;2.38e-10;1!UBERON:0005403;2.38e-10;1!UBERON:0005965;2.38e-10;1!UBERON:0002078;2.38e-10;1!UBERON:0000955;4.25e-10;68!UBERON:0001893;5.43e-10;34!UBERON:0010313;8.95e-09;10!UBERON:0007023;2.55e-08;114!UBERON:0002021;2.58e-08;5!UBERON:0000966;2.78e-08;5!UBERON:0005388;2.78e-08;5!UBERON:0001802;2.78e-08;5!UBERON:0001016;7.94e-08;83!UBERON:0000073;3.04e-07;53!UBERON:0002616;3.04e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,3.59e-28,3;UBERON:0009751,3.59e-28,3;UBERON:0000946,3.59e-28,3;UBERON:0002523,3.59e-28,3;UBERON:0005983,3.59e-28,3;UBERON:0002165,3.59e-28,3;UBERON:0002062,3.59e-28,3;UBERON:0007280,3.59e-28,3;UBERON:0001905,5.34e-20,2;UBERON:0002757,5.34e-20,2;UBERON:0010134,5.34e-20,2;UBERON:0005408,5.34e-20,2;UBERON:0001899,5.34e-20,2;UBERON:0002133,2.38e-19,2;UBERON:0003075,2.85e-19,82;UBERON:0007284,2.85e-19,82;UBERON:0001017,3.85e-19,81;UBERON:0002346,2.80e-18,86;UBERON:0007023,8.35e-18,114;UBERON:0001016,4.82e-17,89;UBERON:0000955,8.10e-17,68;UBERON:0006238,8.10e-17,68;UBERON:0002780,2.46e-16,41;UBERON:0001890,2.46e-16,41;UBERON:0003080,2.46e-16,41;UBERON:0006240,2.46e-16,41;UBERON:0003056,4.20e-16,61;UBERON:0004121,6.10e-16,171;UBERON:0000924,6.10e-16,171;UBERON:0006601,6.10e-16,171;UBERON:0001950,3.89e-15,20;UBERON:0010371,9.51e-15,104;UBERON:0002619,8.74e-14,22;UBERON:0002791,1.07e-12,32;UBERON:0001869,1.07e-12,32;UBERON:0004797,1.98e-12,7;UBERON:0000073,1.98e-12,53;UBERON:0002616,1.98e-12,53;UBERON:0000956,3.81e-12,25;UBERON:0000203,3.81e-12,25;UBERON:0003528,6.23e-12,34;UBERON:0002020,6.23e-12,34;UBERON:0001893,6.23e-12,34;UBERON:0001049,1.04e-11,56;UBERON:0005068,1.04e-11,56;UBERON:0006241,1.04e-11,56;UBERON:0007135,1.04e-11,56;UBERON:0010314,3.78e-11,132;UBERON:0002135,9.84e-11,1;UBERON:0002146,1.30e-10,1;UBERON:0005623,1.30e-10,1;UBERON:0002022,1.57e-10,1;UBERON:0003296,1.81e-10,4;UBERON:0010133,1.81e-10,4;UBERON:0002784,1.81e-10,4;UBERON:0002134,2.28e-10,1;UBERON:0005208,2.28e-10,1;UBERON:0005946,2.28e-10,1;UBERON:0005965,2.28e-10,1;UBERON:0002078,2.28e-10,1;UBERON:0001882,3.61e-10,1;UBERON:0005403,3.61e-10,1;UBERON:0010313,7.43e-09,10;UBERON:0002342,7.43e-09,10;UBERON:0005062,7.43e-09,10;UBERON:0011216,9.28e-09,223;UBERON:0002021,2.83e-08,5;UBERON:0000966,4.26e-07,6;UBERON:0005388,4.26e-07,6;UBERON:0001802,4.26e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0.492663237895943,0.616339038092582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52456774533478,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383010740264733,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0,0,0,2.90799823828566,0.278304294485554,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.482385754501632,0,0.110579259931225,0,1.09692698576986,0,0.139423744278603,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0.91821828489147,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0.677942222341597,0,0,1.51945910294109,0,0,0.640358984218058,0,0,0,0.857974989309823,0,0,0,0,0,0,0,0,0,0,0,0,2.23425921017803,1.83328339209347,1.43574604915363,0,1.28767814440971,0.669514372325618,0.53746777989381,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,1.64023802976667,0,0,0.209818352539992,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0.496166021811951,0,0,0,0,0.5013797880454,0,0,0,0,1.46431517882356,0.3755727921195,0,0.110929051536852,0.18628920882415,1.10678907948985,0,0,0.285465333544967,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,1.15612605173627,0,0.159633859057151,1.23069818544453,3.02486035466062,0.345786262321089,0.807378228159255,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0.607838261565552,0,0.413373593002368,0.507326481551255,0.546974809018219,0,0.496211178389294,0,0,14.999651404592,15.4690512220659,0,0.227662191351298,0,0,0,0.135939465953663,0.855046056317038,0,0,0,0.471346769748006,0,0.913158720509496,0,0,1.71543706023975,2.21219056425817,0,0.173858272302579,0,0,0,1.38251932362818,0.860454717640555,0,0,0.846774100381858,0.22910686854405,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0.109940516745429,0,0.154348316215889,0.437119121007915,0,0.735444965261716,0,0,0.594092800654172,0,0,0.375935671919414,0.322289439867886,0,0,0,0,0,0,0,0,1.22384682343646,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.454672189309436,0.267964130156178,0,0.20686599172379,0.426467963801962,0,0,0.186224142887574,0,0.0636471582781649,0,0,0,0.134704106029175,0.215166616178029,0.332660356546013,0,0,0,0,0,0.366724332548599,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0.492663237895943,0.616339038092582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52456774533478,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383010740264733,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0,0,0,2.90799823828566,0.278304294485554,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.482385754501632,0,0.110579259931225,0,1.09692698576986,0,0.139423744278603,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0.91821828489147,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0.677942222341597,0,0,1.51945910294109,0,0,0.640358984218058,0,0,0,0.857974989309823,0,0,0,0,0,0,0,0,0,0,0,0,2.23425921017803,1.83328339209347,1.43574604915363,0,1.28767814440971,0.669514372325618,0.53746777989381,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,1.64023802976667,0,0,0.209818352539992,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0.496166021811951,0,0,0,0,0.5013797880454,0,0,0,0,1.46431517882356,0.3755727921195,0,0.110929051536852,0.18628920882415,1.10678907948985,0,0,0.285465333544967,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,1.15612605173627,0,0.159633859057151,1.23069818544453,3.02486035466062,0.345786262321089,0.807378228159255,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0.607838261565552,0,0.413373593002368,0.507326481551255,0.546974809018219,0,0.496211178389294,0,0,14.999651404592,15.4690512220659,0,0.227662191351298,0,0,0,0.135939465953663,0.855046056317038,0,0,0,0.471346769748006,0,0.913158720509496,0,0,1.71543706023975,2.21219056425817,0,0.173858272302579,0,0,0,1.38251932362818,0.860454717640555,0,0,0.846774100381858,0.22910686854405,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0.109940516745429,0,0.154348316215889,0.437119121007915,0,0.735444965261716,0,0,0.594092800654172,0,0,0.375935671919414,0.322289439867886,0,0,0,0,0,0,0,0,1.22384682343646,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.454672189309436,0.267964130156178,0,0.20686599172379,0.426467963801962,0,0,0.186224142887574,0,0.0636471582781649,0,0,0,0.134704106029175,0.215166616178029,0.332660356546013,0,0,0,0,0,0.366724332548599,0,0,0.201273793591026,0 | ||
|short_description=p13@PDE1C | |||
}} | }} |
Latest revision as of 07:30, 18 September 2015
Short description: | p13@PDE1C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_PDE1C_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | -231bp_to_NM_001191058_5end |
EntrezGene: | PDE1C |
HGNC: | 8776 |
UniProt: | E9PE92Q14123Q8NB10 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data