FFCP PHASE1:Hg19::chr7:5567661..5567703,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:5567661..5567703,-
|short_description=p12@ACTB
|description=CAGE_peak_12_at_ACTB_5end
|association_with_transcript=25bp_to_ENST00000464611_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=60 | |EntrezGene=60 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=132 | |HGNC=132 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=25bp_to_ENST00000464611_5end | |||
|cluster_id=chr7:5567661..5567703,- | |||
|description=CAGE_peak_12_at_ACTB_5end | |||
|id=chr7:5567661..5567703,- | |||
|ontology_enrichment_celltype=CL:0000766!1.10e-07!76;CL:0002009!1.91e-07!65;CL:0002194!3.19e-07!63;CL:0000576!3.19e-07!63;CL:0000040!3.19e-07!63;CL:0000559!3.19e-07!63;CL:0000222!8.94e-07!119 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.42e-08,72;CL:0002009,5.02e-08,61;CL:0000473,5.07e-08,48;CL:0000234,5.07e-08,48;CL:0002194,8.43e-08,59;CL:0000576,8.43e-08,59;CL:0000040,8.43e-08,59;CL:0000559,8.43e-08,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.64e-09!216;UBERON:0002204!2.40e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,5.09e-09,203;UBERON:0000926,3.89e-08,315;UBERON:0004120,3.89e-08,315;UBERON:0006603,3.89e-08,315;UBERON:0002204,8.56e-07,167 | |||
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| ||
|short_description=p12@ACTB | |||
}} | }} |
Latest revision as of 01:59, 19 September 2015
Short description: | p12@ACTB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_ACTB_5end |
Coexpression cluster: | NA |
Association with transcript: | 25bp_to_ENST00000464611_5end |
EntrezGene: | ACTB |
HGNC: | 132 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 3.42e-08 | 72 |
macrophage dendritic cell progenitor | 5.02e-08 | 61 |
defensive cell | 5.07e-08 | 48 |
phagocyte | 5.07e-08 | 48 |
monopoietic cell | 8.43e-08 | 59 |
monocyte | 8.43e-08 | 59 |
monoblast | 8.43e-08 | 59 |
promonocyte | 8.43e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 5.09e-09 | 203 |
mesoderm | 3.89e-08 | 315 |
mesoderm-derived structure | 3.89e-08 | 315 |
presumptive mesoderm | 3.89e-08 | 315 |
musculoskeletal system | 8.56e-07 | 167 |