FFCP PHASE1:Hg19::chr7:65338312..65338363,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:65338312..65338363,+
|short_description=p3@VKORC1L1
|description=CAGE_peak_3_at_VKORC1L1_5end
|association_with_transcript=0bp_to_ENST00000434382_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=154807 | |EntrezGene=154807 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21492 | |HGNC=21492 | ||
|TSSclassifier=strong | |||
|UniProt=E7ETM5 | |UniProt=E7ETM5 | ||
|association_with_transcript=0bp_to_ENST00000434382_5end | |||
|cluster_id=chr7:65338312..65338363,+ | |||
|coexpression_cluster_id=C29 | |||
|description=CAGE_peak_3_at_VKORC1L1_5end | |||
|id=chr7:65338312..65338363,+ | |||
|ontology_enrichment_celltype=CL:0000136!8.16e-08!15 | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.81e-10;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,2.64e-08,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.95e-15!115;UBERON:0003080!5.37e-09!42;UBERON:0001049!1.03e-08!57;UBERON:0005068!1.03e-08!57;UBERON:0006241!1.03e-08!57;UBERON:0007135!1.03e-08!57;UBERON:0002780!1.28e-08!41;UBERON:0001890!1.28e-08!41;UBERON:0006240!1.28e-08!41;UBERON:0000468!1.78e-08!659;UBERON:0004111!5.26e-08!241;UBERON:0000062!5.88e-08!511;UBERON:0000475!6.28e-08!365;UBERON:0005743!7.09e-08!86;UBERON:0000477!2.24e-07!286;UBERON:0001017!2.29e-07!82;UBERON:0002616!2.52e-07!59;UBERON:0000064!2.54e-07!219;UBERON:0000073!2.80e-07!94;UBERON:0001016!2.80e-07!94;UBERON:0001893!2.81e-07!34;UBERON:0002020!4.32e-07!34;UBERON:0003528!4.32e-07!34;UBERON:0000033!4.67e-07!123;UBERON:0000025!5.21e-07!194;UBERON:0000467!5.67e-07!625;UBERON:0001869!6.07e-07!32;UBERON:0000480!7.43e-07!626;UBERON:0002619!7.92e-07!22;UBERON:0002791!8.07e-07!33;UBERON:0003056!8.46e-07!61;UBERON:0000955!9.44e-07!69;UBERON:0006238!9.44e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;7.05e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.78e-16,114;UBERON:0001049,1.17e-08,56;UBERON:0005068,1.17e-08,56;UBERON:0006241,1.17e-08,56;UBERON:0007135,1.17e-08,56;UBERON:0002780,1.26e-08,41;UBERON:0001890,1.26e-08,41;UBERON:0003080,1.26e-08,41;UBERON:0006240,1.26e-08,41;UBERON:0000073,1.34e-08,53;UBERON:0002616,1.34e-08,53;UBERON:0011216,2.88e-08,223;UBERON:0003075,5.96e-08,82;UBERON:0007284,5.96e-08,82;UBERON:0010371,6.98e-08,104;UBERON:0003056,2.35e-07,61;UBERON:0001893,3.12e-07,34;UBERON:0003528,4.90e-07,34;UBERON:0002020,4.90e-07,34;UBERON:0002346,5.68e-07,86;UBERON:0001869,7.28e-07,32;UBERON:0002619,7.41e-07,22;UBERON:0001017,9.21e-07,81 | |||
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| ||
|short_description=p3@VKORC1L1 | |||
}} | }} |
Latest revision as of 05:42, 19 September 2015
Short description: | p3@VKORC1L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_VKORC1L1_5end |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | 0bp_to_ENST00000434382_5end |
EntrezGene: | VKORC1L1 |
HGNC: | 21492 |
UniProt: | E7ETM5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 2.64e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.78e-16 | 114 |
neural tube | 1.17e-08 | 56 |
neural rod | 1.17e-08 | 56 |
future spinal cord | 1.17e-08 | 56 |
neural keel | 1.17e-08 | 56 |
regional part of forebrain | 1.26e-08 | 41 |
forebrain | 1.26e-08 | 41 |
anterior neural tube | 1.26e-08 | 41 |
future forebrain | 1.26e-08 | 41 |
regional part of nervous system | 1.34e-08 | 53 |
regional part of brain | 1.34e-08 | 53 |
organ system subdivision | 2.88e-08 | 223 |
neural plate | 5.96e-08 | 82 |
presumptive neural plate | 5.96e-08 | 82 |
ecto-epithelium | 6.98e-08 | 104 |
pre-chordal neural plate | 2.35e-07 | 61 |
telencephalon | 3.12e-07 | 34 |
brain grey matter | 4.90e-07 | 34 |
gray matter | 4.90e-07 | 34 |
neurectoderm | 5.68e-07 | 86 |
cerebral hemisphere | 7.28e-07 | 32 |
regional part of cerebral cortex | 7.41e-07 | 22 |
central nervous system | 9.21e-07 | 81 |