FFCP PHASE1:Hg19::chr7:80275559..80275572,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:80275559..80275572,+
|short_description=p18@CD36
|description=CAGE_peak_18_at_CD36_5end
|association_with_transcript=-72bp_to_ENST00000426978,ENST000004322...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=948 | |EntrezGene=948 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1663 | |HGNC=1663 | ||
|TSSclassifier=strong | |||
|UniProt=E7EWI4,P16671,A4D1B1 | |UniProt=E7EWI4,P16671,A4D1B1 | ||
|association_with_transcript=-72bp_to_ENST00000426978,ENST00000432207,NM_001127443,uc003uhg.3_5end | |||
|cluster_id=chr7:80275559..80275572,+ | |||
|description=CAGE_peak_18_at_CD36_5end | |||
|id=chr7:80275559..80275572,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000764;1.33e-13;2!CL:0000558;1.33e-13;2!CL:0000136;4.77e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.33e-13,2;CL:0000765,1.33e-13,2;CL:0000050,1.33e-13,2;CL:0000038,1.33e-13,2;CL:0000558,1.33e-13,2;CL:0000547,1.33e-13,2;CL:0000549,1.33e-13,2;CL:0000550,1.33e-13,2;CL:0000552,1.33e-13,2;CL:0000136,5.57e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0010226;1.72e-07;1!UBERON:0004140;3.84e-07;1!UBERON:0005062;9.78e-07;4!UBERON:0007284;9.78e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:8552;2.35e-07;1!DOID:1036;2.60e-07;8 | |||
|ontology_enrichment_disease_v019_2=DOID:8552,1.95e-07,1;DOID:1036,2.87e-07,8 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.39e-24!115;UBERON:0000178!4.46e-09!15;UBERON:0000179!4.46e-09!15;UBERON:0000463!4.46e-09!15;UBERON:0003978!1.74e-07!3;UBERON:0009751!1.74e-07!3;UBERON:0000946!1.74e-07!3;UBERON:0002523!1.74e-07!3;UBERON:0005983!1.74e-07!3;UBERON:0002165!1.74e-07!3;UBERON:0002062!1.74e-07!3;UBERON:0007280!1.74e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.16e-25;15!UBERON:0000179;1.16e-25;15!UBERON:0000463;1.16e-25;15!UBERON:0002390;7.66e-11;32!UBERON:0003978;1.05e-08;3!UBERON:0000946;1.05e-08;3!UBERON:0007100;5.36e-08;25!UBERON:0002084;1.72e-07;1!UBERON:0002082;1.72e-07;1!UBERON:0001389;2.35e-07;1!UBERON:0001282;2.35e-07;1!UBERON:0000026;2.35e-07;1!UBERON:0008784;2.35e-07;1!UBERON:0006058;2.35e-07;1!UBERON:0009842;2.35e-07;1!UBERON:0003704;2.35e-07;1!UBERON:0003663;2.35e-07;1!UBERON:0004256;2.35e-07;1!UBERON:0004708;2.35e-07;1!UBERON:0002101;2.35e-07;1!UBERON:0004709;2.35e-07;1!UBERON:0002529;2.35e-07;1!UBERON:0010538;2.35e-07;1!UBERON:0003661;2.35e-07;1!UBERON:0010890;2.35e-07;1!UBERON:0002471;2.35e-07;1!UBERON:0001383;2.35e-07;1!UBERON:0010758;2.35e-07;1!UBERON:0010707;2.35e-07;1!UBERON:0000978;2.35e-07;1!UBERON:0002103;2.35e-07;1!UBERON:0001171;2.35e-07;1!UBERON:0001172;2.35e-07;1!UBERON:0001665;2.35e-07;1!UBERON:0003823;2.35e-07;1!UBERON:0000154;2.35e-07;1!UBERON:0010709;2.35e-07;1!UBERON:0002135;3.84e-07;1!UBERON:0002146;3.84e-07;1!UBERON:0005623;3.84e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.12e-25,15;UBERON:0000179,1.12e-25,15;UBERON:0000463,1.12e-25,15;UBERON:0007023,2.39e-15,114;UBERON:0003978,7.91e-09,3;UBERON:0009751,7.91e-09,3;UBERON:0000946,7.91e-09,3;UBERON:0002523,7.91e-09,3;UBERON:0005983,7.91e-09,3;UBERON:0002165,7.91e-09,3;UBERON:0002062,7.91e-09,3;UBERON:0007280,7.91e-09,3;UBERON:0001009,6.81e-08,112;UBERON:0002084,1.83e-07,1;UBERON:0002082,1.83e-07,1;UBERON:0010226,1.83e-07,1;UBERON:0007100,2.08e-07,27;UBERON:0005418,2.50e-07,1;UBERON:0001389,2.50e-07,1;UBERON:0000026,2.50e-07,1;UBERON:0008784,2.50e-07,1;UBERON:0006058,2.50e-07,1;UBERON:0003663,2.50e-07,1;UBERON:0004256,2.50e-07,1;UBERON:0004708,2.50e-07,1;UBERON:0002101,2.50e-07,1;UBERON:0004709,2.50e-07,1;UBERON:0002529,2.50e-07,1;UBERON:0010538,2.50e-07,1;UBERON:0003661,2.50e-07,1;UBERON:0010890,2.50e-07,1;UBERON:0002471,2.50e-07,1;UBERON:0001383,2.50e-07,1;UBERON:0004357,2.50e-07,1;UBERON:0004347,2.50e-07,1;UBERON:0005420,2.50e-07,1;UBERON:0005732,2.50e-07,1;UBERON:0010758,2.50e-07,1;UBERON:0010707,2.50e-07,1;UBERON:0000978,2.50e-07,1;UBERON:0002103,2.50e-07,1;UBERON:0001665,2.50e-07,1;UBERON:0003823,2.50e-07,1;UBERON:0000154,2.50e-07,1;UBERON:0010709,2.50e-07,1;UBERON:0005733,2.50e-07,1;UBERON:0005730,2.50e-07,1;UBERON:0001282,2.66e-07,1;UBERON:0009842,2.66e-07,1;UBERON:0003704,2.66e-07,1;UBERON:0001171,2.66e-07,1;UBERON:0001172,2.66e-07,1;UBERON:0002135,3.01e-07,1;UBERON:0002146,3.20e-07,1;UBERON:0005623,3.20e-07,1 | |||
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| ||
|short_description=p18@CD36 | |||
}} | }} |
Latest revision as of 16:57, 19 September 2015
Short description: | p18@CD36 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_CD36_5end |
Coexpression cluster: | NA |
Association with transcript: | -72bp_to_ENST00000426978, ENST00000432207, NM_001127443, uc003uhg.3_5end |
EntrezGene: | CD36 |
HGNC: | 1663 |
UniProt: | E7EWI4P16671A4D1B1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.33e-13 | 2 |
erythroblast | 1.33e-13 | 2 |
megakaryocyte-erythroid progenitor cell | 1.33e-13 | 2 |
erythroid progenitor cell | 1.33e-13 | 2 |
reticulocyte | 1.33e-13 | 2 |
proerythroblast | 1.33e-13 | 2 |
basophilic erythroblast | 1.33e-13 | 2 |
polychromatophilic erythroblast | 1.33e-13 | 2 |
orthochromatic erythroblast | 1.33e-13 | 2 |
fat cell | 5.57e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
chronic myeloid leukemia | 1.95e-07 | 1 |
chronic leukemia | 2.87e-07 | 8 |