FFCP PHASE1:Hg19::chr10:1089744..1089786,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:1089744..1089786,- | |||
|coexpression_cluster_id=C1103 | |||
|description=CAGE_peak_at_chr10:1089744..1089786,- | |||
|id=chr10:1089744..1089786,- | |||
|ontology_enrichment_celltype=CL:0000037!7.43e-45!172;CL:0000566!7.43e-45!172;CL:0000738!6.70e-43!140;CL:0002032!3.10e-41!165;CL:0000837!3.10e-41!165;CL:0000988!3.87e-41!182;CL:0002087!1.58e-39!119;CL:0002031!3.13e-37!124;CL:0000542!3.85e-34!53;CL:0000051!3.85e-34!53;CL:0000838!1.71e-33!52;CL:0000945!9.37e-19!24;CL:0000826!9.37e-19!24;CL:0000791!5.35e-17!18;CL:0000789!5.35e-17!18;CL:0002420!5.35e-17!18;CL:0002419!5.35e-17!18;CL:0000790!5.35e-17!18;CL:0000236!8.41e-14!14;CL:0000084!2.84e-13!25;CL:0000827!2.84e-13!25;CL:0000763!8.64e-13!112;CL:0000049!8.64e-13!112;CL:0002057!1.81e-12!42;CL:0000766!2.28e-12!76;CL:0000625!5.21e-11!11;CL:0000860!5.22e-11!45;CL:0000839!8.07e-10!70;CL:0000557!7.70e-09!71;CL:0002194!2.59e-08!63;CL:0000576!2.59e-08!63;CL:0000040!2.59e-08!63;CL:0000559!2.59e-08!63;CL:0002009!8.96e-08!65;CL:0002393!1.26e-07!9;CL:0002397!1.26e-07!9;CL:0000624!8.17e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.76e-27;53!CL:0000945;8.20e-26;24!CL:0000791;1.67e-25;18!CL:0000789;1.67e-25;18!CL:0002419;1.67e-25;18!CL:0000236;2.36e-22;13!CL:0000084;1.70e-19;25!CL:0000625;3.44e-18;11!CL:0002087;5.60e-13;104!CL:0000988;1.19e-08;177!CL:0000738;5.88e-08;136!CL:0000624;7.84e-08;6!CL:0000094;1.53e-07;8!CL:0000898;8.07e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,4.43e-49,52;CL:0000542,6.62e-48,53;CL:0000051,6.62e-48,53;CL:0000738,4.69e-41,136;CL:0000037,1.61e-38,168;CL:0002087,4.10e-38,115;CL:0002032,1.21e-36,161;CL:0000837,1.21e-36,161;CL:0000988,1.56e-35,177;CL:0002031,6.11e-34,120;CL:0000945,8.15e-26,24;CL:0000826,8.15e-26,24;CL:0000791,1.55e-25,18;CL:0000789,1.55e-25,18;CL:0002420,1.55e-25,18;CL:0002419,1.55e-25,18;CL:0000790,1.55e-25,18;CL:0000236,1.78e-20,14;CL:0000084,1.62e-19,25;CL:0000827,1.62e-19,25;CL:0000625,5.56e-18,11;CL:0000134,2.03e-08,354;CL:0000624,6.01e-08,6;CL:0002320,6.16e-08,361;CL:0000094,1.67e-07,8;CL:0000898,8.34e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000051;1.76e-27;53!CL:0000790;1.67e-25;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.45e-17!102;UBERON:0003061!4.45e-17!102;UBERON:0002193!2.43e-16!112;UBERON:0000178!2.60e-10!15;UBERON:0000179!2.60e-10!15;UBERON:0000463!2.60e-10!15;UBERON:0002371!5.98e-08!80;UBERON:0002405!2.18e-07!115;UBERON:0007023!6.75e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.94e-15;15!UBERON:0000179;1.94e-15;15!UBERON:0000463;1.94e-15;15!UBERON:0002390;4.32e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.37e-15,15;UBERON:0000179,1.37e-15,15;UBERON:0000463,1.37e-15,15;UBERON:0002390,5.13e-11,98;UBERON:0003061,5.13e-11,98;UBERON:0002193,6.57e-11,108;UBERON:0002384,2.76e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22261449196722,1.47781061009902,1.49550484495991,2.36018566109342,2.30297638858328,1.08371286321253,0,0,0,0,1.27952309238679,0.293600439334847,0.553995408531877,0.401088894940283,1.95309783644267,0.447830948479849,1.6194683300949,0.515151135268373,0.290796477559129,0.377875943688809,0,0.232429036905685,0.411167888021826,0.309706370895104,0.575384784644301,1.2808035326455,1.18241114944293,0,0,0,0,0,0.449446968890169,0,0,0.639337125799041,1.64925650093358,1.59570926097305,2.13112375266347,0,0,0.622822248995575,1.25624332628372,0.521482918420201,0.434377689410233,0,0.368277635987565,0.316462387440884,1.26753171787165,1.70083439972035,0.838634582033504,2.92054440980887,1.50176892841506,1.12507910687956,1.71007646244749,2.18808344918999,0.730656615058536,8.79981222306614,20.2071286166989,11.5636203002262,13.6553671221282,26.4261351443768,23.5648500381338,15.2040320740518,30.5297201451317,18.2148150115023,8.22132065119314,14.1441094406335,2.64342657158052,1.12101712596307,1.58030450865046,0.983548850569165,1.96505381374582,2.46721798799411,20.3967524376627,4.23698946623668,3.31413464014313,3.89653456815823,23.730427316542,12.668054021418,17.7227115666897,8.93652750424551,16.7799628840634,17.037774530344,3.78207180588455,5.25065033793112,6.0858648004361,2.22429844743091,1.07016331235885,2.09071047609954,6.79856056185397,3.83220493601921,4.81078423675682,4.30133476433155,2.22995790026868,4.55758417699493,3.8018081777935,5.72185452495537,3.96758494578697,2.49861453104692,4.97232229292435,3.28451198768419,1.00803371612366,1.06976078313403,1.30341963494519,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.261958150995425,0,0,0,0,0,0.715471872916026,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445893486866185,0,0,0,0,0,0,0,0.176096868026452,1.03664057770386,0.864719720501769,1.64115163454294,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68127715990291,4.3346767244424,4.09692392233083,3.08023287071396,0,0,0,0,0,2.24702107184155,0,2.90090859405225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89475236572042,4.31428401637234,2.24127871387233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.657779629937804,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0.329294892959902,0.379473173765715,0,0,0,0,0.659006605437454,0,0,0,0,4.05958087385735,3.82318603571188,2.27858874869665,4.2881719582402,5.34770955012053,1.94541993357815,2.70015718619057,1.58625035258854,0,0,0,0.743212700502875,6.34784537096357,0,0,0,1.1490322207942,1.05836791361941,4.54470716384378,0.280797178113459,0,0.156679895773023,0,0,0.642352300414798,0.403599414382095,0.851692475380653,0,0,0,0,1.17232857241224,0,0,0,1.6653598399891,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0.422250816255987,0.597743964753209,4.42054264849836,0,0,3.56945935837101,0,0,0,2.55786185113436,0,4.7896618469388,0,0,0,0,0,0.0874599999961957,1.44999915086959,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,1.2558420511602,0.332423363800313,0,0,0,0,0.317873157960757,0,0,0,0,0,0.0884575645033392,0,0,0,0.208843899010911,0.134802265961354,0.802577647298789,0,0,0,0,0,1.20990716048664,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0.136905378891993,0,0,11.3041562340105,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0.179287339332845,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0.26446520348538,0,0,0.427149650270779,0.471612915298998,1.65695622138878,3.96932817449561,0,0.243585196761792,0,0,0,0,0,0,0,0,0,0.573409195690071,0.110929051536852,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0.39997479170986,0,6.37195424745018,0,0,0,0.622077260032973,0,0,0,0,0,0,0.619678821295011,0,0,6.15121611009776,0,0,0,0.0642292250964595,0,0,0,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0.535701835878287,0,0,0.455324382702595,0.266107110487916,0.691403925334676,0,0.0679697329768317,0,0,0,0.156986185701028,0,0.280272163313789,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0.860454717640555,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0.485710993059139,0,0,0.118920090777569,0,0,0,0.231522474323834,0.437119121007915,0,0,0,0,0.297046400327086,0,0,3.00748537535531,3.609641726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| |||
|short_description=p@chr10:1089744..1089786,- | |||
}} |
Latest revision as of 10:13, 23 July 2015
Short description: | p@chr10:1089744..1089786, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:1089744..1089786, - |
Coexpression cluster: | C1103_CD19_CD4_CD8_Whole_blood_Burkitt_thymus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 4.43e-49 | 52 |
lymphocyte | 6.62e-48 | 53 |
common lymphoid progenitor | 6.62e-48 | 53 |
leukocyte | 4.69e-41 | 136 |
hematopoietic stem cell | 1.61e-38 | 168 |
nongranular leukocyte | 4.10e-38 | 115 |
hematopoietic oligopotent progenitor cell | 1.21e-36 | 161 |
hematopoietic multipotent progenitor cell | 1.21e-36 | 161 |
hematopoietic cell | 1.56e-35 | 177 |
hematopoietic lineage restricted progenitor cell | 6.11e-34 | 120 |
lymphocyte of B lineage | 8.15e-26 | 24 |
pro-B cell | 8.15e-26 | 24 |
mature alpha-beta T cell | 1.55e-25 | 18 |
alpha-beta T cell | 1.55e-25 | 18 |
immature T cell | 1.55e-25 | 18 |
mature T cell | 1.55e-25 | 18 |
immature alpha-beta T cell | 1.55e-25 | 18 |
B cell | 1.78e-20 | 14 |
T cell | 1.62e-19 | 25 |
pro-T cell | 1.62e-19 | 25 |
CD8-positive, alpha-beta T cell | 5.56e-18 | 11 |
mesenchymal cell | 2.03e-08 | 354 |
CD4-positive, alpha-beta T cell | 6.01e-08 | 6 |
connective tissue cell | 6.16e-08 | 361 |
granulocyte | 1.67e-07 | 8 |
naive T cell | 8.34e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 1.37e-15 | 15 |
haemolymphatic fluid | 1.37e-15 | 15 |
organism substance | 1.37e-15 | 15 |
hematopoietic system | 5.13e-11 | 98 |
blood island | 5.13e-11 | 98 |
hemolymphoid system | 6.57e-11 | 108 |
connective tissue | 2.76e-07 | 371 |