FFCP PHASE1:Hg19::chr10:15902304..15902313,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80013 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23578 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=183bp_to_ENST00000477891_5end | |||
|cluster_id=chr10:15902304..15902313,- | |||
|description=CAGE_peak_3_at_FAM188A_5end | |||
|id=chr10:15902304..15902313,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002591;2.21e-40;1!CL:0002552;3.22e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,3.30e-40,1;CL:0002552,3.22e-09,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000078;5.69e-21;2!UBERON:0002012;5.69e-21;2!UBERON:0008886;5.69e-21;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000078,6.96e-21,2;UBERON:0007497,6.96e-21,2;UBERON:0003643,6.96e-21,2;UBERON:0003504,6.96e-21,2;UBERON:0003469,6.96e-21,2;UBERON:0003496,6.96e-21,2;UBERON:0002012,6.96e-21,2;UBERON:0008886,6.96e-21,2;UBERON:0007303,6.96e-21,2;UBERON:0002061,6.96e-21,2;UBERON:0005432,6.96e-21,2;UBERON:0004363,6.96e-21,2;UBERON:0004145,2.09e-14,3;UBERON:0003498,3.49e-09,5;UBERON:0005985,3.49e-09,5;UBERON:0010188,7.25e-08,6;UBERON:0002539,7.25e-08,6;UBERON:0003351,7.25e-08,6;UBERON:0008816,7.25e-08,6 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.140954404095971,0,0,0,0,0.631719873426831,0,0,0,0,0,0.123766352960047,0,0.672325146451775,0,0,0,0.123121058076788,0,0,0,0,0.125542639594803,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0.755751887377619,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0.217188844705117,0,0,0,0.211255286311942,0.212604299965044,0.209658645508376,0,0,0,0.285012743741249,0,0,0,0,0,0.853460445133014,0,0.574752439954483,0,0,0.569212969109448,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0.222820913770347,0.294605907474837,0.221533894583621,0,0,0,0.164437904603676,0,0,0.14828656316206,0,0,0,0.383220493601921,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0,0.221729397462564,0,0,0,0,0,0.348259474598534,0,0,0,0,0.198762407366705,0,0,0.56530794192401,0,0,0.208994966536811,0,0.35576626268671,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0,0,0.113432183160021,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0.132529768321485,0.232387885739037,0,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0.441463099414651,0.122988438543114,0,0,0,0,0,0,0,0,0,0.234817388471643,0.288732895522148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0.12624243342638,0,0,0,0,0,0.300343057843917,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0.301439377059586,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0,0,0.197030760201927,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0.300946099727719,0,0,0,0,0.0868836144680828,0,0,0,0.215714200818617,0.213455115606889,0,0,0,0.496215615637554,0,0,0.128139149255701,0,0.160853921143607,0,0,0,0,0.519254429183621,0,0.120859449591622,0,0,0,0.182091168006717,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0.421258456238981,0,0,0,0.136499911407986,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0.106824071127473,0,0,0,0.144269212976445,0,0,0.399158742865633,0.191505370132367,0,0,0,0,0,2.50634477090067,0,0,0,0.425846237690326,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0.296964680832639,0,0,0,0,0,0,0,0.828851746593443,0,0,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,1.99613798001194,0,0.0874599999961957,0,0,0.254253650292766,0,0,0,0.173624994933292,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0.156980256395025,0,0,0,0,0.189753732724185,0,0,0,0.141353071433941,0,0.995261931078505,0.176915129006678,0.611030144933625,0.296521128680622,0.123563938946503,0,0,0,0.234264445725339,0.364909578431332,0,0,0,0,0,0,0.150323419414493,0,0,0.330991955875499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0.137041924646751,0,0.316553979779393,0,0,0,0,0,0,0.343189995723929,0,0,0,0,0.104602846312333,0,0,0.600420288709789,0,0,0,0,0,0.229160424011684,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0.136203406111576,0,0,0.415440338029185,0,0,0.303747783290123,0,0.157611414598396,0.104909176269996,0.105600336519406,0.179287339332845,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0.129282956361551,0,0,0,0.106787412567695,0,0,0,0,0.60896299190448,0,0,0,0,0,0,0,0.488105059607853,0,0.573409195690071,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0.15543720058278,0,0,0,0.155262956876259,0,0.265841714557995,0,0.150257608997218,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0.38582807654183,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0.172214979660816,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0.318004350653419,2.3658523500376,0.80057074828547,0,0,0.321146125482298,0,0,0.205116364240755,0.252071696221718,0.0691572524642179,0.161475645631851,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0.337687923091973,0.781078098613847,0.206686796501184,0.253663240775627,0.546974809018219,0,0.496211178389294,0,0,0,0,0,0,0,0.115233987555779,0,0.135939465953663,0.131545547125698,0,0.111231401892069,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0.118920090777569,0.22589216407792,0,0.150962843566674,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0,0.281951753939561,0.193373663920732,0,0,0,0,0,0.458729283404541,0,0.157771562193185,0.135982980381829,0,0,0,0,0,0,0.109265571963696,0,0,0.534434810531121,0.0918948995348449,0,0.227336094654718,0,0,0,0,0.23806443146374,0,0.0620747142958579,0,0,0,0,0,0.202056159043763,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0.320568492303233 | |||
|short_description=p3@FAM188A | |||
}} |
Latest revision as of 08:57, 17 September 2015
Short description: | p3@FAM188A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FAM188A_5end |
Coexpression cluster: | NA |
Association with transcript: | 183bp_to_ENST00000477891_5end |
EntrezGene: | FAM188A |
HGNC: | 23578 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 3.30e-40 | 1 |
fibroblast of gingiva | 3.22e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
mixed ectoderm/mesoderm/endoderm-derived structure | 6.96e-21 | 2 |
developing epithelial placode | 6.96e-21 | 2 |
respiratory system arterial blood vessel | 6.96e-21 | 2 |
respiratory system blood vessel | 6.96e-21 | 2 |
respiratory system artery | 6.96e-21 | 2 |
head blood vessel | 6.96e-21 | 2 |
pulmonary artery | 6.96e-21 | 2 |
pulmonary vascular system | 6.96e-21 | 2 |
pharyngeal vasculature | 6.96e-21 | 2 |
truncus arteriosus | 6.96e-21 | 2 |
aortic sac | 6.96e-21 | 2 |
pharyngeal arch artery | 6.96e-21 | 2 |
outflow tract | 2.09e-14 | 3 |
heart blood vessel | 3.49e-09 | 5 |
coronary vessel | 3.49e-09 | 5 |
protuberance | 7.25e-08 | 6 |
pharyngeal arch | 7.25e-08 | 6 |
pharyngeal epithelium | 7.25e-08 | 6 |
embryonic head | 7.25e-08 | 6 |