FFCP PHASE1:Hg19::chr10:5138199..5138209,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:5138199..5138209,+ | |||
|coexpression_cluster_id=C249 | |||
|description=CAGE_peak_at_chr10:5138199..5138209,+ | |||
|id=chr10:5138199..5138209,+ | |||
|ontology_enrichment_celltype=CL:0002553!2.66e-18!1;CL:0000319!5.26e-18!1;CL:0000159!1.12e-09!2;CL:0000082!1.46e-08!19 | |||
|ontology_enrichment_celltype_v019=CL:0002553;1.46e-50;1!CL:0000082;1.72e-11;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,1.46e-50,1;CL:0000082,1.72e-11,19 | |||
|ontology_enrichment_development_v019=UBERON:0001041;4.24e-27;30!UBERON:0009497;2.84e-16;13!UBERON:0008947;6.91e-08;29 | |||
|ontology_enrichment_disease=DOID:3030!5.26e-18!1;DOID:0050619!1.22e-17!1;DOID:1357!1.22e-17!1;DOID:0050615!5.66e-17!16;DOID:1324!1.08e-10!15;DOID:305!1.74e-09!106;DOID:0050687!1.04e-08!143;DOID:4556!7.70e-07!3 | |||
|ontology_enrichment_disease_v019=DOID:1324;2.94e-14;15!DOID:0050615;1.95e-13;16 | |||
|ontology_enrichment_disease_v019_2=DOID:1324,2.94e-14,15;DOID:0050615,1.95e-13,16;DOID:305,2.62e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0001764!1.22e-17!1;UBERON:0001825!1.22e-17!1;UBERON:0004802!1.46e-08!19;UBERON:0000115!1.46e-08!19;UBERON:0002048!1.81e-07!22;UBERON:0000117!1.81e-07!22;UBERON:0000171!1.81e-07!22;UBERON:0000170!1.81e-07!22;UBERON:0005597!1.81e-07!22;UBERON:0000118!1.81e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002394;1.13e-13;4!UBERON:0003928;1.13e-13;4!UBERON:0004802;1.72e-11;19!UBERON:0000115;1.72e-11;19!UBERON:0002048;4.53e-10;22!UBERON:0004807;4.53e-10;22!UBERON:0000117;4.53e-10;22!UBERON:0000171;4.53e-10;22!UBERON:0000170;4.53e-10;22!UBERON:0002423;5.49e-09;25!UBERON:0002294;2.18e-08;7!UBERON:0001173;2.18e-08;7!UBERON:0005181;1.17e-07;35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004802,1.72e-11,19;UBERON:0000115,1.72e-11,19;UBERON:0005911,1.66e-10,82;UBERON:0002048,4.53e-10,22;UBERON:0000117,4.53e-10,22;UBERON:0000171,4.53e-10,22;UBERON:0000170,4.53e-10,22;UBERON:0005597,4.53e-10,22;UBERON:0008835,4.53e-10,22;UBERON:0000118,4.53e-10,22;UBERON:0003894,4.53e-10,22;UBERON:0001041,5.98e-10,87;UBERON:0009854,1.12e-09,23;UBERON:0002394,1.44e-09,6;UBERON:0003928,1.44e-09,6;UBERON:0007499,5.49e-09,25;UBERON:0009497,5.49e-09,25;UBERON:0000015,5.49e-09,25;UBERON:0002423,5.49e-09,25;UBERON:0006235,5.49e-09,25;UBERON:0004161,5.49e-09,25;UBERON:0009856,1.11e-08,26;UBERON:0004807,3.92e-08,28;UBERON:0004921,1.75e-07,118;UBERON:0005178,7.16e-07,34;UBERON:0002224,7.16e-07,34;UBERON:0002294,8.37e-07,9;UBERON:0001173,8.37e-07,9;UBERON:0004912,8.37e-07,9 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,2.14825409610731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.24810688998671,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35857467866569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53978154095896,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.0057074828547,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:5138199..5138209,+ | |||
}} |
Latest revision as of 14:03, 23 July 2015
Short description: | p@chr10:5138199..5138209, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:5138199..5138209, + |
Coexpression cluster: | C249_nonsmall_small_smallcell_occipital_somatostatinoma_maxillary_medial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 1.46e-50 | 1 |
epithelial cell of lung | 1.72e-11 | 19 |
Ontology term | p-value | n |
---|---|---|
respiratory tract epithelium | 1.72e-11 | 19 |
lung epithelium | 1.72e-11 | 19 |
endo-epithelium | 1.66e-10 | 82 |
lung | 4.53e-10 | 22 |
respiratory tube | 4.53e-10 | 22 |
respiration organ | 4.53e-10 | 22 |
pair of lungs | 4.53e-10 | 22 |
lung primordium | 4.53e-10 | 22 |
hepatic diverticulum | 4.53e-10 | 22 |
lung bud | 4.53e-10 | 22 |
liver primordium | 4.53e-10 | 22 |
foregut | 5.98e-10 | 87 |
digestive tract diverticulum | 1.12e-09 | 23 |
bile duct | 1.44e-09 | 6 |
digestive system duct | 1.44e-09 | 6 |
epithelial sac | 5.49e-09 | 25 |
epithelium of foregut-midgut junction | 5.49e-09 | 25 |
anatomical boundary | 5.49e-09 | 25 |
hepatobiliary system | 5.49e-09 | 25 |
foregut-midgut junction | 5.49e-09 | 25 |
septum transversum | 5.49e-09 | 25 |
sac | 1.11e-08 | 26 |
respiratory system epithelium | 3.92e-08 | 28 |
subdivision of digestive tract | 1.75e-07 | 118 |
thoracic cavity element | 7.16e-07 | 34 |
thoracic cavity | 7.16e-07 | 34 |
biliary system | 8.37e-07 | 9 |
biliary tree | 8.37e-07 | 9 |
biliary bud | 8.37e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
lung cancer | 2.94e-14 | 15 |
respiratory system cancer | 1.95e-13 | 16 |
carcinoma | 2.62e-08 | 106 |