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FFCP PHASE1:Hg19::chr10:8100691..8100732,+: Difference between revisions

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{{FFCP|DPIdataset=robustDPI|EntrezGene=2625|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4172|TSSclassifier=W|UniProt=|association_with_transcript=329bp_to_ENST00000461472_5end|coexpression_cluster_id=C1124|description=CAGE_peak_5_at_GATA3_5end|id=chr10:8100691..8100732,+|ontology_enrichment_celltype=CL:0000084!3.31e-08!25;CL:0000827!3.31e-08!25;CL:0000791!3.00e-07!18;CL:0000789!3.00e-07!18;CL:0002420!3.00e-07!18;CL:0002419!3.00e-07!18;CL:0000790!3.00e-07!18;CL:0002327!5.32e-07!4|ontology_enrichment_celltype_v019=CL:0000349;5.17e-22;19!CL:0002541;3.47e-12;3!CL:0002577;1.02e-11;3!CL:0002536;6.42e-09;2!CL:0002327;8.06e-09;4!CL:0002537;1.78e-07;5!CL:0000333;3.02e-07;5!CL:0000312;9.03e-07;5|ontology_enrichment_celltype_v019_2=CL:0000349,6.00e-22,19;CL:0002541,3.41e-12,3;CL:0002577,1.37e-11,3;CL:0002536,6.31e-09,2;CL:0002327,7.65e-09,4;CL:0002537,1.79e-07,5;CL:0000312,8.86e-07,5|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:5093!4.94e-08!4;DOID:1612!4.94e-08!4|ontology_enrichment_disease_v019=DOID:5093;2.29e-16;4!DOID:1612;2.29e-16;4|ontology_enrichment_disease_v019_2=DOID:5093,2.34e-16,4;DOID:1612,2.34e-16,4|ontology_enrichment_uberon=UBERON:0005631!2.92e-16!14;UBERON:0000158!2.92e-16!14;UBERON:0003124!6.27e-12!7;UBERON:0000478!2.90e-09!24;UBERON:0001008!1.38e-07!45;UBERON:0001987!2.30e-07!4;UBERON:0004340!2.30e-07!4;UBERON:0001911!5.32e-07!4;UBERON:0005333!5.32e-07!4;UBERON:0008425!5.32e-07!4;UBERON:0005311!5.32e-07!4;UBERON:0006554!7.05e-07!44|ontology_enrichment_uberon_v019=UBERON:0005631;1.40e-23;10!UBERON:0000158;1.40e-23;10!UBERON:0000478;4.04e-20;24!UBERON:0001987;6.25e-15;4!UBERON:0000305;9.33e-14;7!UBERON:0003124;3.47e-12;3!UBERON:0000920;3.47e-12;3!UBERON:0001911;8.06e-09;4!UBERON:0000013;3.02e-07;5!UBERON:0002410;3.02e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.91e-36,14;UBERON:0000158,1.91e-36,14;UBERON:0003124,2.82e-25,7;UBERON:0000478,4.43e-20,24;UBERON:0001987,7.78e-15,4;UBERON:0004340,7.78e-15,4;UBERON:0000305,9.23e-14,7;UBERON:0000920,3.41e-12,3;UBERON:0004871,5.41e-12,8;UBERON:0001008,1.89e-09,48;UBERON:0001911,7.65e-09,4;UBERON:0005333,7.65e-09,4;UBERON:0008425,7.65e-09,4;UBERON:0005311,7.65e-09,4;UBERON:0006554,3.23e-08,47;UBERON:0000013,2.99e-07,5;UBERON:0002410,2.99e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,13.5433650720707,8.44054330331051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57204305099666,0.411202997999018,2.00623794468814,0,0,0,7.13026924065111,2.94605907474837,1.99380505125259,2.43723477388514,3.84273959177025,4.29195846947598,0.493313713811028,1.38175008892924,0.869409257205157,0,0,0,0.679856056185397,0.383220493601921,0,0,0,0,0,0.150575119077773,0.255973222308837,1.24930726552346,0.473554504088034,0.821127996921047,0,0.267440195783507,0.289648807765598,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.79504962946682,0,1.04142150482278,0,0,0,0.417989933073621,0,0,0,0,0,0,0,0,1.07159673940896,0.44905874525234,1.46394924628319,0,0,1.28241220751285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53650399572076,1.1240175325762,3.71957197923034,0,0,0,0,0,0,0,0,0,22.915927540819,25.7545848628462,0,0,0,0,0,0,0.447792613514241,1.45316969256981,3.4504441124869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0.215627574859517,0.256686072559497,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0,1.21251028578504,8.32177197552485,6.35019615992329,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40607764363942,0.0920809889358963,0,0,0,1.35359883872224,0.693138033939733,0,1.46139224653261,0.105551628892876,0,0,0,0,0,0,3.56826782263054,2.49322802678617,0.223874754722178,0,0,0,0,0.325378394664303,0.721287081534056,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.847294206991012,2.58303223602738,0,1.7737206141467,0.918893600827838,0.507447609232169,0.764637207142375,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0.640276590135727,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,6.79804644092618,0,4.05865624054073,12.1755519141382,6.75753544618311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,20.8342208868187,9.53313999958533,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,5.30296980092538,0.987334088507493,6.7361370591645,6.38002319463839,4.48828207669125,9.59462596833542,8.17546385565892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,1.04836000945218,0,0,0,0,0,0,0,0,0,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{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=2625
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=4172
|TSSclassifier=strong
|UniProt=
|association_with_transcript=329bp_to_ENST00000461472_5end
|cluster_id=chr10:8100691..8100732,+
|coexpression_cluster_id=C1124
|description=CAGE_peak_5_at_GATA3_5end
|id=chr10:8100691..8100732,+
|ontology_enrichment_celltype=CL:0000084!3.31e-08!25;CL:0000827!3.31e-08!25;CL:0000791!3.00e-07!18;CL:0000789!3.00e-07!18;CL:0002420!3.00e-07!18;CL:0002419!3.00e-07!18;CL:0000790!3.00e-07!18;CL:0002327!5.32e-07!4
|ontology_enrichment_celltype_v019=CL:0000349;5.17e-22;19!CL:0002541;3.47e-12;3!CL:0002577;1.02e-11;3!CL:0002536;6.42e-09;2!CL:0002327;8.06e-09;4!CL:0002537;1.78e-07;5!CL:0000333;3.02e-07;5!CL:0000312;9.03e-07;5
|ontology_enrichment_celltype_v019_2=CL:0000349,6.00e-22,19;CL:0002541,3.41e-12,3;CL:0002577,1.37e-11,3;CL:0002536,6.31e-09,2;CL:0002327,7.65e-09,4;CL:0002537,1.79e-07,5;CL:0000312,8.86e-07,5
|ontology_enrichment_development_v019=
|ontology_enrichment_disease=DOID:5093!4.94e-08!4;DOID:1612!4.94e-08!4
|ontology_enrichment_disease_v019=DOID:5093;2.29e-16;4!DOID:1612;2.29e-16;4
|ontology_enrichment_disease_v019_2=DOID:5093,2.34e-16,4;DOID:1612,2.34e-16,4
|ontology_enrichment_uberon=UBERON:0005631!2.92e-16!14;UBERON:0000158!2.92e-16!14;UBERON:0003124!6.27e-12!7;UBERON:0000478!2.90e-09!24;UBERON:0001008!1.38e-07!45;UBERON:0001987!2.30e-07!4;UBERON:0004340!2.30e-07!4;UBERON:0001911!5.32e-07!4;UBERON:0005333!5.32e-07!4;UBERON:0008425!5.32e-07!4;UBERON:0005311!5.32e-07!4;UBERON:0006554!7.05e-07!44
|ontology_enrichment_uberon_v019=UBERON:0005631;1.40e-23;10!UBERON:0000158;1.40e-23;10!UBERON:0000478;4.04e-20;24!UBERON:0001987;6.25e-15;4!UBERON:0000305;9.33e-14;7!UBERON:0003124;3.47e-12;3!UBERON:0000920;3.47e-12;3!UBERON:0001911;8.06e-09;4!UBERON:0000013;3.02e-07;5!UBERON:0002410;3.02e-07;5
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.91e-36,14;UBERON:0000158,1.91e-36,14;UBERON:0003124,2.82e-25,7;UBERON:0000478,4.43e-20,24;UBERON:0001987,7.78e-15,4;UBERON:0004340,7.78e-15,4;UBERON:0000305,9.23e-14,7;UBERON:0000920,3.41e-12,3;UBERON:0004871,5.41e-12,8;UBERON:0001008,1.89e-09,48;UBERON:0001911,7.65e-09,4;UBERON:0005333,7.65e-09,4;UBERON:0008425,7.65e-09,4;UBERON:0005311,7.65e-09,4;UBERON:0006554,3.23e-08,47;UBERON:0000013,2.99e-07,5;UBERON:0002410,2.99e-07,5
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|short_description=p5@GATA3
}}

Latest revision as of 12:39, 19 September 2015

Short description:p5@GATA3
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_5_at_GATA3_5end
Coexpression cluster:C1124_MCF7_breast_chorionic_nasal_choriocarcinoma_seminal_amniotic
Association with transcript: 329bp_to_ENST00000461472_5end
EntrezGene:GATA3
HGNC: 4172
UniProt: NA
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data