FFCP PHASE1:Hg19::chr10:89419595..89419643,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9060 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8604 | |||
|TSSclassifier=strong | |||
|UniProt=O95340,Q5TB52 | |||
|association_with_transcript=119bp_to_ENST00000456849,NM_001015880,NM_004670,uc001kew.2,uc001kex.2_5end | |||
|cluster_id=chr10:89419595..89419643,+ | |||
|description=CAGE_peak_1_at_PAPSS2_5end | |||
|id=chr10:89419595..89419643,+ | |||
|ontology_enrichment_celltype=CL:0000222!6.08e-29!119;CL:0000055!1.37e-22!180;CL:0000680!1.31e-18!57;CL:0000056!1.31e-18!57;CL:0000355!1.31e-18!57;CL:0000187!5.13e-18!54;CL:0000192!1.17e-17!42;CL:0000514!1.17e-17!42;CL:0000183!1.83e-17!59;CL:0000359!1.16e-15!32;CL:0000057!1.33e-15!75;CL:0000393!7.40e-15!60;CL:0000211!7.40e-15!60;CL:0000048!1.16e-12!430;CL:0000723!1.99e-11!436;CL:0000213!8.00e-11!57;CL:0000215!8.00e-11!57;CL:0000034!3.74e-10!444;CL:0000144!1.41e-07!625;CL:0002371!1.46e-07!591;CL:0002494!1.52e-07!16;CL:0002057!2.16e-07!42;CL:0000860!6.46e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0000359;6.63e-15;32!CL:0000192;8.58e-13;43!CL:0000187;3.05e-10;55!CL:0000393;6.22e-08;61!CL:0000211;6.22e-08;61!CL:0000860;7.08e-08;33!CL:0002057;7.08e-08;33!CL:0002494;1.29e-07;16!CL:0000057;8.42e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.37e-29,121;CL:0000680,9.25e-19,58;CL:0000056,9.25e-19,58;CL:0000355,9.25e-19,58;CL:0000187,3.71e-18,55;CL:0000192,9.51e-18,43;CL:0000514,9.51e-18,43;CL:0000057,2.94e-16,76;CL:0000359,8.40e-16,32;CL:0000393,7.12e-15,61;CL:0000211,7.12e-15,61;CL:0000048,5.65e-14,427;CL:0000723,1.29e-12,433;CL:0000034,2.56e-11,441;CL:0000213,3.41e-11,58;CL:0000215,3.41e-11,58;CL:0002494,1.33e-07,16;CL:0000860,1.89e-07,42;CL:0002057,1.89e-07,42;CL:0000473,4.19e-07,48;CL:0000234,4.19e-07,48;CL:0002078,6.29e-07,45;CL:0000115,6.85e-07,36 | |||
|ontology_enrichment_development_v019=CL:0000514;8.58e-13;43!CL:0000355;5.36e-10;58!CL:0000222;2.92e-08;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!5.14e-25!79;UBERON:0007798!5.14e-25!79;UBERON:0000055!2.29e-22!69;UBERON:0004872!4.16e-22!84;UBERON:0004535!7.49e-22!110;UBERON:0001981!1.67e-21!60;UBERON:0007500!1.67e-21!60;UBERON:0004537!1.67e-21!60;UBERON:0006965!1.67e-21!60;UBERON:0001009!3.17e-21!113;UBERON:0000926!5.09e-21!448;UBERON:0004120!5.09e-21!448;UBERON:0006603!5.09e-21!448;UBERON:0002204!7.28e-21!167;UBERON:0003914!1.77e-19!118;UBERON:0000914!1.64e-18!83;UBERON:0002329!1.64e-18!83;UBERON:0003077!1.64e-18!83;UBERON:0003059!1.64e-18!83;UBERON:0007282!1.64e-18!83;UBERON:0009618!1.64e-18!83;UBERON:0007285!1.64e-18!83;UBERON:0003081!2.52e-18!216;UBERON:0001134!3.96e-18!61;UBERON:0002036!3.96e-18!61;UBERON:0003082!3.96e-18!61;UBERON:0000468!5.38e-18!659;UBERON:0002385!5.57e-18!63;UBERON:0001015!5.57e-18!63;UBERON:0000383!5.57e-18!63;UBERON:0004290!6.52e-18!70;UBERON:0001637!6.91e-18!42;UBERON:0003509!6.91e-18!42;UBERON:0004572!6.91e-18!42;UBERON:0000490!1.57e-16!138;UBERON:0005256!1.89e-16!143;UBERON:0000467!7.05e-15!625;UBERON:0000480!1.25e-14!626;UBERON:0000486!3.10e-14!82;UBERON:0004573!8.84e-14!33;UBERON:0004571!8.84e-14!33;UBERON:0002100!2.07e-12!216;UBERON:0002050!4.82e-11!605;UBERON:0005423!4.82e-11!605;UBERON:0000923!7.20e-11!604;UBERON:0005291!7.20e-11!604;UBERON:0006598!7.20e-11!604;UBERON:0002532!7.20e-11!604;UBERON:0000922!8.55e-11!612;UBERON:0000477!7.17e-09!286;UBERON:0000948!6.72e-08!24;UBERON:0005498!6.72e-08!24;UBERON:0004140!6.72e-08!24;UBERON:0009881!6.72e-08!24;UBERON:0004141!6.72e-08!24;UBERON:0003084!6.72e-08!24;UBERON:0007005!6.72e-08!24;UBERON:0004139!6.72e-08!24;UBERON:0004291!6.72e-08!24;UBERON:0000119!9.57e-08!312;UBERON:0000947!9.78e-08!21;UBERON:0010191!9.78e-08!21;UBERON:0000025!1.05e-07!194;UBERON:0004111!1.58e-07!241;UBERON:0000483!1.69e-07!309;UBERON:0003104!1.74e-07!238;UBERON:0009142!1.74e-07!238;UBERON:0007100!4.81e-07!27;UBERON:0002405!6.28e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;4.85e-13;42!UBERON:0003509;4.85e-13;42!UBERON:0004572;4.85e-13;42!UBERON:0004573;1.63e-12;33!UBERON:0004571;1.63e-12;33!UBERON:0007500;5.02e-12;56!UBERON:0001981;5.02e-12;56!UBERON:0004537;5.02e-12;56!UBERON:0000055;8.24e-11;65!UBERON:0002049;3.91e-10;75!UBERON:0007798;3.91e-10;75!UBERON:0000947;8.34e-08;21!UBERON:0010191;8.34e-08;21!UBERON:0003914;2.92e-07;74!UBERON:0000948;4.97e-07;22 | |||
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| |||
|short_description=p1@PAPSS2 | |||
}} |
Latest revision as of 18:44, 19 September 2015
Short description: | p1@PAPSS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PAPSS2_5end |
Coexpression cluster: | NA |
Association with transcript: | 119bp_to_ENST00000456849, NM_001015880, NM_004670, uc001kew.2, uc001kex.2_5end |
EntrezGene: | PAPSS2 |
HGNC: | 8604 |
UniProt: | O95340Q5TB52 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.37e-29 | 121 |
muscle precursor cell | 9.25e-19 | 58 |
myoblast | 9.25e-19 | 58 |
multi-potent skeletal muscle stem cell | 9.25e-19 | 58 |
muscle cell | 3.71e-18 | 55 |
smooth muscle cell | 9.51e-18 | 43 |
smooth muscle myoblast | 9.51e-18 | 43 |
fibroblast | 2.94e-16 | 76 |
vascular associated smooth muscle cell | 8.40e-16 | 32 |
electrically responsive cell | 7.12e-15 | 61 |
electrically active cell | 7.12e-15 | 61 |
multi fate stem cell | 5.65e-14 | 427 |
somatic stem cell | 1.29e-12 | 433 |
stem cell | 2.56e-11 | 441 |
lining cell | 3.41e-11 | 58 |
barrier cell | 3.41e-11 | 58 |
cardiocyte | 1.33e-07 | 16 |
classical monocyte | 1.89e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.89e-07 | 42 |
defensive cell | 4.19e-07 | 48 |
phagocyte | 4.19e-07 | 48 |
meso-epithelial cell | 6.29e-07 | 45 |
endothelial cell | 6.85e-07 | 36 |