FFCP PHASE1:Hg19::chr11:102663376..102663430,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:102663376..102663430,- | |||
|coexpression_cluster_id=C422 | |||
|description=CAGE_peak_at_chr11:102663376..102663430,- | |||
|id=chr11:102663376..102663430,- | |||
|ontology_enrichment_celltype=CL:0000359!9.20e-21!32;CL:0000192!2.70e-18!42;CL:0000514!2.70e-18!42;CL:0000187!1.63e-16!54;CL:0000183!2.91e-15!59;CL:0000055!3.23e-15!180;CL:0000680!5.21e-15!57;CL:0000056!5.21e-15!57;CL:0000355!5.21e-15!57;CL:0000393!1.14e-13!60;CL:0000211!1.14e-13!60;CL:0000222!5.33e-12!119;CL:0002539!2.11e-09!10;CL:0002139!2.50e-08!24;CL:0000220!8.41e-08!246;CL:0002321!1.40e-07!248;CL:1000413!3.59e-07!9;CL:0002494!5.13e-07!16;CL:0002595!5.76e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.66e-31;32!CL:0000192;1.42e-17;43!CL:0002539;1.40e-14;10!CL:1000306;7.59e-10;4!CL:0002547;7.59e-10;4!CL:0002594;7.59e-10;4!CL:0002595;6.43e-09;5!CL:0002139;9.21e-09;24!CL:0002592;1.15e-08;3!CL:0002494;1.91e-08;16!CL:0000115;1.95e-08;36!CL:0000187;3.83e-08;55!CL:0002582;2.09e-07;3!CL:0000393;6.84e-07;61!CL:0000211;6.84e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,2.66e-32,32;CL:0000192,2.30e-24,43;CL:0000514,2.30e-24,43;CL:0000187,1.44e-17,55;CL:0000222,2.11e-16,121;CL:0000680,2.57e-16,58;CL:0000056,2.57e-16,58;CL:0000355,2.57e-16,58;CL:0000393,3.42e-15,61;CL:0000211,3.42e-15,61;CL:0002539,1.42e-14,10;CL:1000306,4.90e-10,4;CL:0002547,4.90e-10,4;CL:0002594,9.38e-10,4;CL:0002595,6.45e-09,5;CL:0002139,9.53e-09,24;CL:0002592,1.15e-08,3;CL:0000115,1.64e-08,36;CL:0002494,2.06e-08,16;CL:0002582,2.43e-07,3;CL:0002321,4.22e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000514;1.42e-17;43!CL:0000355;1.42e-07;58 | |||
|ontology_enrichment_disease=DOID:2394!5.82e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!4.01e-36!42;UBERON:0003509!4.01e-36!42;UBERON:0004572!4.01e-36!42;UBERON:0000055!6.85e-30!69;UBERON:0001981!1.23e-28!60;UBERON:0007500!1.23e-28!60;UBERON:0004537!1.23e-28!60;UBERON:0006965!1.23e-28!60;UBERON:0004573!5.01e-28!33;UBERON:0004571!5.01e-28!33;UBERON:0004872!1.03e-27!84;UBERON:0002049!1.12e-24!79;UBERON:0007798!1.12e-24!79;UBERON:0003914!1.13e-20!118;UBERON:0004535!5.51e-20!110;UBERON:0001009!6.34e-19!113;UBERON:0000947!1.61e-17!21;UBERON:0010191!1.61e-17!21;UBERON:0004290!7.02e-16!70;UBERON:0000914!3.10e-14!83;UBERON:0002329!3.10e-14!83;UBERON:0003077!3.10e-14!83;UBERON:0003059!3.10e-14!83;UBERON:0007282!3.10e-14!83;UBERON:0009618!3.10e-14!83;UBERON:0007285!3.10e-14!83;UBERON:0002385!3.27e-14!63;UBERON:0001015!3.27e-14!63;UBERON:0000383!3.27e-14!63;UBERON:0000486!6.40e-14!82;UBERON:0001134!2.95e-13!61;UBERON:0002036!2.95e-13!61;UBERON:0003082!2.95e-13!61;UBERON:0000490!2.98e-12!138;UBERON:0001135!1.94e-10!15;UBERON:0005256!2.71e-10!143;UBERON:0004111!5.11e-10!241;UBERON:0000477!1.27e-09!286;UBERON:0004237!2.11e-09!10;UBERON:0004695!2.11e-09!10;UBERON:0002111!2.11e-09!10;UBERON:0004178!2.11e-09!10;UBERON:0000926!5.84e-08!448;UBERON:0004120!5.84e-08!448;UBERON:0006603!5.84e-08!448;UBERON:0000025!1.67e-07!194;UBERON:0000467!1.95e-07!625;UBERON:0000480!2.34e-07!626;UBERON:0003915!3.59e-07!9;UBERON:0004700!3.59e-07!9;UBERON:0001917!3.59e-07!9;UBERON:0003834!5.76e-07!5;UBERON:0001533!5.76e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.46e-36;33!UBERON:0004571;1.46e-36;33!UBERON:0001637;9.70e-36;42!UBERON:0003509;9.70e-36;42!UBERON:0004572;9.70e-36;42!UBERON:0000947;4.13e-25;21!UBERON:0010191;4.13e-25;21!UBERON:0007500;4.95e-21;56!UBERON:0001981;4.95e-21;56!UBERON:0004537;4.95e-21;56!UBERON:0000055;1.68e-18;65!UBERON:0004237;1.40e-14;10!UBERON:0004695;1.40e-14;10!UBERON:0002111;1.40e-14;10!UBERON:0004178;1.40e-14;10!UBERON:0002049;1.40e-14;75!UBERON:0007798;1.40e-14;75!UBERON:0003914;4.61e-14;74!UBERON:0004797;7.59e-10;4!UBERON:0000415;7.59e-10;4!UBERON:0007240;7.59e-10;4!UBERON:0005742;7.59e-10;4!UBERON:0005734;7.59e-10;4!UBERON:0004664;7.59e-10;4!UBERON:0001310;7.59e-10;4!UBERON:0004663;7.59e-10;4!UBERON:0001135;3.45e-09;15!UBERON:0003834;6.43e-09;5!UBERON:0001533;6.43e-09;5!UBERON:0003498;1.15e-08;3!UBERON:0005985;1.15e-08;3!UBERON:0001621;1.15e-08;3!UBERON:0001009;6.10e-08;112!UBERON:0004535;1.90e-07;109!UBERON:0006947;3.42e-07;3!UBERON:0004054;3.42e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,7.59e-48,42;UBERON:0003509,7.59e-48,42;UBERON:0004572,7.59e-48,42;UBERON:0004573,1.91e-40,33;UBERON:0004571,1.91e-40,33;UBERON:0000055,2.87e-38,68;UBERON:0007500,8.48e-36,59;UBERON:0001981,8.48e-36,59;UBERON:0004537,8.48e-36,59;UBERON:0006965,8.48e-36,59;UBERON:0004872,1.25e-35,83;UBERON:0002049,6.05e-32,78;UBERON:0007798,6.05e-32,78;UBERON:0003914,4.31e-27,117;UBERON:0004535,4.32e-27,109;UBERON:0001009,4.82e-26,112;UBERON:0000947,2.84e-25,21;UBERON:0010191,2.84e-25,21;UBERON:0007503,1.37e-20,78;UBERON:0002329,9.24e-19,71;UBERON:0003059,9.24e-19,71;UBERON:0007282,9.24e-19,71;UBERON:0004290,9.24e-19,71;UBERON:0009618,9.24e-19,71;UBERON:0003077,2.18e-18,72;UBERON:0007285,2.18e-18,72;UBERON:0007524,5.00e-18,73;UBERON:0000486,6.56e-15,83;UBERON:0001134,7.66e-15,62;UBERON:0002036,7.66e-15,62;UBERON:0003082,7.66e-15,62;UBERON:0004237,1.42e-14,10;UBERON:0004695,1.42e-14,10;UBERON:0002111,1.42e-14,10;UBERON:0004178,1.42e-14,10;UBERON:0000926,3.43e-14,315;UBERON:0004120,3.43e-14,315;UBERON:0006603,3.43e-14,315;UBERON:0002385,3.55e-14,64;UBERON:0001015,3.55e-14,64;UBERON:0000383,3.55e-14,64;UBERON:0003081,7.88e-14,203;UBERON:0005256,8.80e-14,122;UBERON:0000490,1.76e-13,148;UBERON:0004111,1.95e-12,240;UBERON:0000025,9.29e-12,192;UBERON:0000415,4.90e-10,4;UBERON:0007240,4.90e-10,4;UBERON:0005742,4.90e-10,4;UBERON:0005734,4.90e-10,4;UBERON:0004664,4.90e-10,4;UBERON:0004663,4.90e-10,4;UBERON:0001310,9.38e-10,4;UBERON:0001135,3.48e-09,15;UBERON:0003104,4.20e-09,160;UBERON:0009142,4.20e-09,160;UBERON:0003834,6.45e-09,5;UBERON:0001533,6.45e-09,5;UBERON:0002100,1.08e-08,199;UBERON:0003498,1.15e-08,5;UBERON:0005985,1.15e-08,5;UBERON:0001621,1.15e-08,3;UBERON:0003887,5.24e-08,12;UBERON:0000483,1.33e-07,306;UBERON:0000119,2.06e-07,309;UBERON:0006947,4.72e-07,3;UBERON:0004054,4.72e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.41255205032485,3.61616716814386,4.38186054232424,7.80692478064811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47296445977717,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434377689410233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,0.144846518960824,0.795285947051099,0.973269740605272,0,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,1.19257444420023,0.860234595106124,3.12426451446835,1.69592382577203,1.25849830862972,0.550236083880135,0.626984899610432,0.516833518338658,3.5576626268671,1.33888245105868,2.01414658554573,0,0.488124115096339,0,4.86085168729056,0,0,0,0,0,1.46561395144326,0,0,0,0,6.71141711822273,1.85372853138506,4.58938593198102,4.965357350777,1.12135520028461,0,3.20667812942308,0,0,0.980771418680752,0,0,0,1.5608003841516,0,0,1.52664848236894,1.13311061057692,1.12360645361799,1.63323337003915,0.491337269247072,0.929932030581889,0,0,0,0,0.336672227908132,0.125118519871964,0.554128230968366,0,0,0.150238058906597,0.340296549480063,0,0,0,0.300091096084402,0.412210116953756,0.257640540045629,0,0.168776332241266,0,0.252433774244115,0.0920498986422993,0,0,0,0,0.966304265816484,0,0.286804595389004,0,0,0,0,0,0,1.56449532329816,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15493158208859,3.24089858803628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0.857479297891735,0,0,0,0,0,0.845302752556,0,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,1.21637060255316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.39261326365842,2.13074070375753,1.14978018419333,4.67328986265259,2.44041794765914,0,0,0.368323955743585,0,0,0,0,0,0,0,0,0,1.70093705276516,1.0795795805107,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0.650060246036521,0,0,0.154048617114644,0,0.137836572484531,0,0,0.255679882248303,0,0.165284915360978,0.192190067365106,0,0.4046311234222,0,0.62962469366128,3.485186350803,2.15623506123262,4.7907542728532,5.21959795245044,8.71023829788424,0,0,0,0,0,0,0.636406495851874,6.27958912159384,0,0.274537029736055,0.353437207037059,5.45892700247953,17.4361353290309,17.6928551620372,0,10.7233935437765,16.9040234810809,0,1.1312434556297,5.65040583101214,0.551365343546124,19.9031692572366,16.2226827543892,0,0,4.05820753925408,1.239293992399,4.22543403798362,0,0.0982490410131212,6.77674997814376,0.354761064070598,0,0,0,0,0.192444225451024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557216921387392,0,0,0,0,0,0,0.111308705022906,0,0,0.597743964753209,0.276283915531148,0,0,0,2.17727711363265,0.359473404589307,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.455173793141999,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,1.36730467016401,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,18.4279337107823,0,0,4.73501283419269,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,1.04836000945218,0,0,0,0,0,0,0.451961481561065,0,7.15372602130763,0,0,0,2.34798294213288,0,0,0.229073192331831,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0.393709926058995,0,0,0,0,0,0,6.52424285499351,0,0,0,1.41850273138557,0.0524545881349981,0,0,0,0,0,0,2.17199840701485,0,0.653174720218818,0,0.082092520749339,0,0,0.146552233678082,0,0,0,0,0,0.106787412567695,0,0,0,0,0.487170393523584,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0.415045904808692,0,1.36484205787483,0,4.9405822136616,0,0,1.04478362020812,0.233713309847224,0,0,0,0,1.37304041038154,0,3.73049281398673,21.2911415985073,0.477890301491107,1.79921244865442,0.621051827505038,0,1.32920857278997,0.521745061811734,0,0,1.22061219961398,8.36503832331773,0.214821114084977,0.928067519756987,0.796191777397232,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0.353378291891762,0,0,0,0,0,0.138258436151731,0,0.132864840313363,0,2.94848863961771,28.2638845066777,0.422624246717254,0,0,1.20550485762571,0,2.02516545277025,0.279759015438889,0,0,0,0,0,12.5602072165979,0,0,0,0.636008701306837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7614397042404,0,0,0,2.34454203369928,0,11.6278061432169,0,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354996002191696,0.0852134047591577,1.27016115057279,0,8.37557241293664,7.64431151181946,0.223710863595585,0,0,0,0,0,0,0,0,0.356760272332706,0,0,0,0.385870790539723,0.874238242015829,0,0.245148321753905,0,0,0,0,0,13.6276681070788,3.41626806259959,0,0,0,0,0.730336388246517,0,0,0,0,0,2.645134202577,0.743990036333503,0,0,0,0,0,0,0,0.0918948995348449,0,0.151557396436479,0,0,0,0,0,0.0645889098360061,0.496597714366863,3.70035146516024,0,0,0.217716747896961,0,0.606168477131288,0.502055437748735,0,0.16280653722194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| |||
|short_description=p@chr11:102663376..102663430,- | |||
}} |
Latest revision as of 17:30, 23 July 2015
Short description: | p@chr11:102663376..102663430, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:102663376..102663430, - |
Coexpression cluster: | C422_mesenchymal_Smooth_Fibroblast_papillary_Endothelial_fibrous_osteosarcoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 2.66e-32 | 32 |
smooth muscle cell | 2.30e-24 | 43 |
smooth muscle myoblast | 2.30e-24 | 43 |
muscle cell | 1.44e-17 | 55 |
mesodermal cell | 2.11e-16 | 121 |
muscle precursor cell | 2.57e-16 | 58 |
myoblast | 2.57e-16 | 58 |
multi-potent skeletal muscle stem cell | 2.57e-16 | 58 |
electrically responsive cell | 3.42e-15 | 61 |
electrically active cell | 3.42e-15 | 61 |
aortic smooth muscle cell | 1.42e-14 | 10 |
fibroblast of tunica adventitia of artery | 4.90e-10 | 4 |
fibroblast of the aortic adventitia | 4.90e-10 | 4 |
smooth muscle cell of the umbilical artery | 9.38e-10 | 4 |
smooth muscle cell of the subclavian artery | 6.45e-09 | 5 |
endothelial cell of vascular tree | 9.53e-09 | 24 |
smooth muscle cell of the coronary artery | 1.15e-08 | 3 |
endothelial cell | 1.64e-08 | 36 |
cardiocyte | 2.06e-08 | 16 |
visceral preadipocyte | 2.43e-07 | 3 |
embryonic cell | 4.22e-07 | 250 |