FFCP PHASE1:Hg19::chr11:19734369..19734391,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=89797 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15997 | |||
|TSSclassifier=strong | |||
|UniProt=Q8IVL1,A7E2D6 | |||
|association_with_transcript=-489bp_to_ENST00000396085,NM_001244963,NM_145117,NM_182964,uc001mpr.3,uc010rdm.1_5end | |||
|cluster_id=chr11:19734369..19734391,+ | |||
|coexpression_cluster_id=C3129 | |||
|description=CAGE_peak_1_at_NAV2_5end | |||
|id=chr11:19734369..19734391,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.93e-19!180;CL:0000222!4.06e-14!119;CL:0000057!2.97e-11!75;CL:0002139!1.00e-08!24;CL:0000115!5.70e-08!35;CL:0000213!7.15e-08!57;CL:0000215!7.15e-08!57;CL:0002078!1.42e-07!44;CL:0000183!4.38e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002139;7.58e-09;24!CL:0000115;3.62e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,8.04e-15,121;CL:0000057,2.51e-11,76;CL:0002139,7.66e-09,24;CL:0000115,1.79e-08,36;CL:0000213,3.53e-08,58;CL:0000215,3.53e-08,58;CL:0002078,5.39e-08,45;CL:0002321,8.12e-07,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000477!7.08e-28!286;UBERON:0004111!2.57e-26!241;UBERON:0000025!3.88e-24!194;UBERON:0000119!1.17e-23!312;UBERON:0000483!1.27e-22!309;UBERON:0003075!3.68e-18!86;UBERON:0007284!3.68e-18!86;UBERON:0000475!4.25e-17!365;UBERON:0000468!5.07e-17!659;UBERON:0000073!6.53e-17!94;UBERON:0001016!6.53e-17!94;UBERON:0004121!8.86e-17!169;UBERON:0001049!1.12e-16!57;UBERON:0005068!1.12e-16!57;UBERON:0006241!1.12e-16!57;UBERON:0007135!1.12e-16!57;UBERON:0000467!1.88e-16!625;UBERON:0002049!2.14e-16!79;UBERON:0007798!2.14e-16!79;UBERON:0005743!2.47e-16!86;UBERON:0000480!3.17e-16!626;UBERON:0002346!7.63e-16!90;UBERON:0000924!2.81e-15!173;UBERON:0006601!2.81e-15!173;UBERON:0001017!2.99e-15!82;UBERON:0002616!5.14e-15!59;UBERON:0000055!6.76e-15!69;UBERON:0000481!9.50e-15!347;UBERON:0003914!1.26e-13!118;UBERON:0004872!4.58e-13!84;UBERON:0000955!6.97e-13!69;UBERON:0006238!6.97e-13!69;UBERON:0003056!7.69e-13!61;UBERON:0000033!2.33e-12!123;UBERON:0001981!3.52e-12!60;UBERON:0007500!3.52e-12!60;UBERON:0004537!3.52e-12!60;UBERON:0006965!3.52e-12!60;UBERON:0000064!3.80e-12!219;UBERON:0001009!9.10e-12!113;UBERON:0004535!1.40e-11!110;UBERON:0003080!1.76e-11!42;UBERON:0002780!3.56e-11!41;UBERON:0001890!3.56e-11!41;UBERON:0006240!3.56e-11!41;UBERON:0000153!5.45e-11!129;UBERON:0007811!5.45e-11!129;UBERON:0002020!1.19e-10!34;UBERON:0003528!1.19e-10!34;UBERON:0002050!1.35e-10!605;UBERON:0005423!1.35e-10!605;UBERON:0000923!2.13e-10!604;UBERON:0005291!2.13e-10!604;UBERON:0006598!2.13e-10!604;UBERON:0002532!2.13e-10!604;UBERON:0001893!2.24e-10!34;UBERON:0002791!4.84e-10!33;UBERON:0000922!5.12e-10!612;UBERON:0001869!8.52e-10!32;UBERON:0001637!1.54e-09!42;UBERON:0003509!1.54e-09!42;UBERON:0004572!1.54e-09!42;UBERON:0007023!6.79e-09!115;UBERON:0004573!1.24e-08!33;UBERON:0004571!1.24e-08!33;UBERON:0000956!9.45e-08!25;UBERON:0000203!9.45e-08!25;UBERON:0003103!5.45e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.72e-09;34!UBERON:0002020;1.72e-09;34!UBERON:0001893;3.39e-09;34!UBERON:0002791;3.67e-09;32!UBERON:0001869;3.79e-09;32!UBERON:0000073;6.41e-09;53!UBERON:0002616;6.41e-09;53!UBERON:0002780;2.37e-08;41!UBERON:0001890;2.37e-08;41!UBERON:0004573;4.52e-08;33!UBERON:0004571;4.52e-08;33!UBERON:0001637;6.91e-08;42!UBERON:0003509;6.91e-08;42!UBERON:0004572;6.91e-08;42!UBERON:0000956;7.76e-08;25!UBERON:0000203;7.76e-08;25!UBERON:0000055;1.19e-07;65!UBERON:0002049;3.01e-07;75!UBERON:0007798;3.01e-07;75!UBERON:0003914;6.29e-07;74!UBERON:0007500;7.71e-07;56!UBERON:0001981;7.71e-07;56!UBERON:0004537;7.71e-07;56!UBERON:0000487;9.10e-07;22 | |||
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| |||
|short_description=p1@NAV2 | |||
}} |
Latest revision as of 05:15, 17 September 2015
Short description: | p1@NAV2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NAV2_5end |
Coexpression cluster: | C3129_Melanocyte_melanoma_occipital_brain_parietal_aorta_Fibroblast |
Association with transcript: | -489bp_to_ENST00000396085, NM_001244963, NM_145117, NM_182964, uc001mpr.3, uc010rdm.1_5end |
EntrezGene: | NAV2 |
HGNC: | 15997 |
UniProt: | Q8IVL1A7E2D6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 8.04e-15 | 121 |
fibroblast | 2.51e-11 | 76 |
endothelial cell of vascular tree | 7.66e-09 | 24 |
endothelial cell | 1.79e-08 | 36 |
lining cell | 3.53e-08 | 58 |
barrier cell | 3.53e-08 | 58 |
meso-epithelial cell | 5.39e-08 | 45 |
embryonic cell | 8.12e-07 | 250 |