FFCP PHASE1:Hg19::chr11:64122719..64122740,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=283234 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26757 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-74bp_to_ENST00000472524_5end | |||
|cluster_id=chr11:64122719..64122740,+ | |||
|description=CAGE_peak_4_at_CCDC88B_5end | |||
|id=chr11:64122719..64122740,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002567;8.88e-17;3!CL:0002591;5.06e-13;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,1.00e-16,3;CL:0002591,6.82e-13,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!2.05e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:114;3.81e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,3.48e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0002616!3.68e-07!59;UBERON:0000955!4.09e-07!69;UBERON:0006238!4.09e-07!69;UBERON:0001049!4.42e-07!57;UBERON:0005068!4.42e-07!57;UBERON:0006241!4.42e-07!57;UBERON:0007135!4.42e-07!57;UBERON:0002346!6.40e-07!90;UBERON:0003075!6.58e-07!86;UBERON:0007284!6.58e-07!86;UBERON:0001017!8.46e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0000078;3.81e-07;2!UBERON:0002012;3.81e-07;2!UBERON:0008886;3.81e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000078,4.42e-07,2;UBERON:0007497,4.42e-07,2;UBERON:0003643,4.42e-07,2;UBERON:0003504,4.42e-07,2;UBERON:0003469,4.42e-07,2;UBERON:0003496,4.42e-07,2;UBERON:0002012,4.42e-07,2;UBERON:0008886,4.42e-07,2;UBERON:0007303,4.42e-07,2;UBERON:0002061,4.42e-07,2;UBERON:0005432,4.42e-07,2;UBERON:0004363,4.42e-07,2 | |||
|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0.791300934685361,0,0,0,0,0,0.975865597581014,0.369363174230364,0.612002073732759,0,0.286235987131057,0.273748850145768,0.376627918784408,0,0,0,0,0.383829398097213,0.154816123316076,0,0.30120591877825,0,0,0,0,0.553995408531877,0.200544447470142,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0.425208599930087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,1.32171328579026,0,0,0.196709770113833,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.144846518960824,0,0,0.0945348171640679,0,0,0.130979075497713,0.364295288292542,0,0,0.174129737299267,0.26591592103773,0.238490624305342,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0.24406205754817,0,0.81014194788176,0,0,0,0,0,0.183201743930407,0,0,0,0.496971951695318,0.12663051166458,0,0.573673241497627,0.354668382198357,1.12135520028461,0,0.49333509683432,0,0,0.163461903113459,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0.337552664482532,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0,0.504641701751257,0,0,0,0,0,0,0.354920400119532,0.337169380156203,0.482022059766964,0.330881918197182,0,0.474541238222193,0.539325232640658,0.196221465125346,0.38474715694639,0,0,0.4115740113314,0,1.26755034821831,0,0.590789906681404,0,0.122988438543114,0,0,0,0,0,0,0,0,0.115930404975077,0,0.288732895522148,0,0.190254152234598,1.58040879591855,0,0.738651018262192,0,0.445893486866185,0,0,0,0.179117045405697,0.290633938513962,0.383382679165211,0,0.088048434013226,0,0,0,0.190493682876507,1.14596527667483,2.34434894420094,0,0.205654985406647,0.901029173531752,0,0,0,0,0.129271715757778,3.57656445851882,0,0,0,0,0,0,0.142977993658148,0.542621605391443,0,0.65147236858747,0.355391948742546,0,0.301439377059586,0,0.199945982364114,0,1.00451418286425,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0.508189248444927,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0.630809660135739,0.35142424497814,0.300946099727719,0,0,0,0.553107505625109,0.260650843404249,0,0,0,0.215714200818617,0,0.909382714338778,0,0.30239029332968,0,0,0,0.128139149255701,0.511707249066704,0.160853921143607,0,0.154209693802656,0,0.0821271560138091,0,0.116210378459959,0.120859449591622,0,0,0.229628896329213,0.364182336013434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0.183138929636687,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0,0.576570202095319,0,0,0,0,0,0,0.532306030317022,0,0,0.429374660225974,0,0.632758849437452,0.38126038784765,0,0,0,0,0,0.54907405947211,0,0,0,0,0,0,0,0,0.141405431953713,1.13008116620243,0,0,0.438450885253763,0,0.655894752046633,0,0,0,0,0.0982490410131212,0.35667105148125,0,0,0,0.379473173765715,0.349934720244983,0.288666338176536,0,0,0.0941438007767792,0,0,0.886860307073351,0,0,0,0,0,0,0,0,0,0.106824071127473,0.962479855263359,0,0,0,0,0,0.997896857164083,0.191505370132367,0,0.324621940274555,0,0.228234679033192,0,0,0.50787533340481,0.1605880751037,0,0,0,0,0,0,0,0.278406173895242,0,1.6227340708559,0.66614393599564,0,0.935702702041099,0,4.61169982648151,0,0,0,0.593929361665277,0,0,0.422008249231538,0.111308705022906,0,0.211125408127993,0.19924798825107,0.276283915531148,0,0.102268682502155,0,0,0.0898683511473268,0.179021174675609,0,0,0,0,0,0.278304294485554,0,0.260427761085233,0.437299999980979,0,1.365521379426,0.254253650292766,0.945550727071745,0,0,0,0,0.241192877250816,0,0,0.295547618953547,0.219385397153973,0.871507708151921,0,0.0769502585037971,0,0.46112780877612,0.359030577639089,0.217294743844016,0,0.0915975934018623,0.533034776018635,0,0.156980256395025,0,0.225595660617181,0.19606253431774,0.167821586975843,0.37950746544837,0,0.210998064528027,0.489698424477443,0,0.432777279484182,0,0.0884575645033392,0,0,0,0,0.134802265961354,0,0.234264445725339,0,0,0.485560759068186,0,0,0,0.063186579628488,0,0.207376382794494,0,0.330991955875499,0.313932918407225,0,0.284609546029793,1.10939738410511,0,0,0.0870592065804026,0.17472666824203,0,0.19351266257817,0.365446585430928,0.246346371159628,0,0.264768380074501,0.451961481561065,0.274083849293502,0.19871461170299,0.189932387867636,0,0.0801588202515337,0,0,1.00863292007874,0.687219576995494,0,0.14405479798815,0,1.41416420770077,0,0.313808538937,0.203996435272644,0,0,0.547621515567972,0,0.429765441419957,0,0.279282401272254,0,0,0.399358000997982,1.28767814440971,0.669514372325618,0.0671834724867263,0,0,0.0787831823072236,0.0824158583811665,0,0,0,0.795229689809303,0.272406812223151,0.160753148465019,0,0,0,0,0.0607495566580247,0,0.315222829196793,0,0,0.179287339332845,0,0.714695326373367,0.662091970365432,0.5085370753095,0,0.864221491201268,0,0,0.082092520749339,0,0.453248366080503,0,0,0.129282956361551,0.39669780522807,0.513260513652988,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.3755727921195,1.14681839138014,0.443716206147409,0.124192805882767,0.138348634936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| |||
|short_description=p4@CCDC88B | |||
}} |
Latest revision as of 03:21, 19 September 2015
Short description: | p4@CCDC88B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CCDC88B_5end |
Coexpression cluster: | NA |
Association with transcript: | -74bp_to_ENST00000472524_5end |
EntrezGene: | CCDC88B |
HGNC: | 26757 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 1.00e-16 | 3 |
smooth muscle cell of the pulmonary artery | 6.82e-13 | 1 |
Ontology term | p-value | n |
---|---|---|
mixed ectoderm/mesoderm/endoderm-derived structure | 4.42e-07 | 2 |
developing epithelial placode | 4.42e-07 | 2 |
respiratory system arterial blood vessel | 4.42e-07 | 2 |
respiratory system blood vessel | 4.42e-07 | 2 |
respiratory system artery | 4.42e-07 | 2 |
head blood vessel | 4.42e-07 | 2 |
pulmonary artery | 4.42e-07 | 2 |
pulmonary vascular system | 4.42e-07 | 2 |
pharyngeal vasculature | 4.42e-07 | 2 |
truncus arteriosus | 4.42e-07 | 2 |
aortic sac | 4.42e-07 | 2 |
pharyngeal arch artery | 4.42e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
heart disease | 3.48e-07 | 2 |