FFCP PHASE1:Hg19::chr11:71752893..71752915,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4926 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8059 | |||
|TSSclassifier=strong | |||
|UniProt=F5H2F3 | |||
|association_with_transcript=-55bp_to_ENST00000537930_5end | |||
|cluster_id=chr11:71752893..71752915,- | |||
|description=CAGE_peak_6_at_NUMA1_5end | |||
|id=chr11:71752893..71752915,- | |||
|ontology_enrichment_celltype=CL:0000791!3.05e-09!18;CL:0000789!3.05e-09!18;CL:0002420!3.05e-09!18;CL:0002419!3.05e-09!18;CL:0000790!3.05e-09!18;CL:0000625!2.65e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.73e-10;18!CL:0000789;1.73e-10;18!CL:0002419;1.73e-10;18!CL:0000625;5.16e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.46e-10,18;CL:0000789,2.46e-10,18;CL:0002420,2.46e-10,18;CL:0002419,2.46e-10,18;CL:0000790,2.46e-10,18;CL:0000625,7.45e-08,11 | |||
|ontology_enrichment_development_v019=CL:0000790;1.73e-10;18!UBERON:0006601;9.03e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.07e-42!115;UBERON:0001049!2.79e-17!57;UBERON:0005068!2.79e-17!57;UBERON:0006241!2.79e-17!57;UBERON:0007135!2.79e-17!57;UBERON:0002616!2.80e-15!59;UBERON:0000955!1.14e-13!69;UBERON:0006238!1.14e-13!69;UBERON:0003080!1.91e-13!42;UBERON:0002780!2.82e-13!41;UBERON:0001890!2.82e-13!41;UBERON:0006240!2.82e-13!41;UBERON:0005743!8.87e-11!86;UBERON:0001017!1.15e-10!82;UBERON:0002346!1.61e-10!90;UBERON:0001893!1.93e-10!34;UBERON:0002020!3.34e-10!34;UBERON:0003528!3.34e-10!34;UBERON:0000073!3.87e-10!94;UBERON:0001016!3.87e-10!94;UBERON:0003075!4.46e-10!86;UBERON:0007284!4.46e-10!86;UBERON:0002791!4.69e-10!33;UBERON:0001869!2.32e-09!32;UBERON:0000153!1.97e-08!129;UBERON:0007811!1.97e-08!129;UBERON:0003056!2.51e-08!61;UBERON:0002619!2.92e-08!22;UBERON:0001950!1.50e-07!20;UBERON:0000033!1.64e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;7.98e-12;114!UBERON:0000073;1.27e-10;53!UBERON:0002616;1.27e-10;53!UBERON:0002780;1.80e-10;41!UBERON:0001890;1.80e-10;41!UBERON:0001893;1.35e-09;34!UBERON:0003528;4.30e-09;34!UBERON:0002020;4.30e-09;34!UBERON:0002619;4.30e-09;22!UBERON:0002791;5.72e-09;32!UBERON:0001869;7.07e-09;32!UBERON:0001950;2.40e-08;20!UBERON:0001017;3.36e-07;75!UBERON:0000955;5.66e-07;68!UBERON:0000956;7.03e-07;25!UBERON:0000203;7.03e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.24e-46,114;UBERON:0001049,1.45e-18,56;UBERON:0005068,1.45e-18,56;UBERON:0006241,1.45e-18,56;UBERON:0007135,1.45e-18,56;UBERON:0000073,1.57e-17,53;UBERON:0002616,1.57e-17,53;UBERON:0000955,1.08e-14,68;UBERON:0006238,1.08e-14,68;UBERON:0002780,2.27e-14,41;UBERON:0001890,2.27e-14,41;UBERON:0003080,2.27e-14,41;UBERON:0006240,2.27e-14,41;UBERON:0002346,2.60e-13,86;UBERON:0003075,7.95e-13,82;UBERON:0007284,7.95e-13,82;UBERON:0001017,2.71e-12,81;UBERON:0001893,2.88e-11,34;UBERON:0001016,3.13e-11,89;UBERON:0003528,5.26e-11,34;UBERON:0002020,5.26e-11,34;UBERON:0002791,3.22e-10,32;UBERON:0001869,4.40e-10,32;UBERON:0002619,3.36e-09,22;UBERON:0003056,3.87e-09,61;UBERON:0010371,1.82e-08,104;UBERON:0001950,2.02e-08,20;UBERON:0010314,2.03e-07,132;UBERON:0000956,5.66e-07,25;UBERON:0000203,5.66e-07,25 | |||
|phase1_expression=1.2717486548939,2.35510576280081,2.67813367782345,1.0007329835313,3.12872766099101,1.74467704820074,0,1.26343974685366,1.56711376919903,0,0.697801167972428,0.218441372130172,1.05506791291381,2.84662611808107,5.30235801164665,1.34465029290355,0.602694528023977,0,0.975865597581014,1.23121058076788,1.02000345622126,2.19418305034661,0.286235987131057,0.410623275218653,0.627713197974014,0.305653622991805,0.328402357799783,0.393553906568396,3.93364276848904,1.15148819429164,0.309632246632152,0.919421224478927,0.30120591877825,1.10926203050036,0,0.142169232487422,0.880801318004542,1.66198622559563,2.60707781711184,4.12320654360118,1.34349284543955,1.94336199611388,1.28787783817093,1.30858414901608,1.51150377475524,0.727752183563449,1.39457422143411,0,0.309706370895104,0,0.512321413058201,0.236482229888585,0.344745680736619,0,0,0.941211697713023,0.272906150057846,0.224723484445085,0,0.641858054152187,0,0.329851300186716,0.199463657621632,0.426224750532694,0.290209238628584,0.56738522469114,0,0.502497330513487,1.0429658368404,0.868755378820466,0,0,0,1.05627643155971,0.637812899895131,0.209658645508376,0.561643155732475,1.20141514273205,0.48217676009124,0.855038231223746,0.59675003159727,0.365328307529268,7.03984977845291,7.09980194640771,1.77901850772711,3.41384178053206,5.20514783146816,5.74752439954483,5.94940385506376,7.63243003628291,14.7995371968457,11.1575065980478,11.8504700718821,2.64342657158052,3.36305137788922,1.31692042387539,12.982844827513,10.2182798314783,14.1865034309661,8.86088425570594,4.88883399950386,10.4158517261641,9.74133642039557,7.01885878376594,8.54357131677028,7.97522020501036,11.6445661418957,5.25174410875268,6.24284868287415,3.12432018746985,3.03985019564433,7.24507714337631,13.9389369372337,12.0393372640371,10.4535523804977,4.87230173599535,8.04763036564035,6.52892146416997,13.4100436770337,5.09704662918555,6.51083453856419,6.65316431113862,10.6908334545219,12.1587280596697,13.742379920758,4.2619905367923,6.56902397536837,12.0964045934839,8.02320587350522,11.0066546950927,0,0,0.383587685530591,2.1686349143074,3.50936537445123,2.31754430337318,2.3858578411533,5.35298357332899,0.850813354476611,1.10864698731282,0.790513071238134,3.73290365168481,1.45718115317017,0.370784442784429,1.29818957461873,0.696518949197069,0.398873881556595,3.33886874027479,0.571994910780128,2.97166001063652,0.39752481473341,1.72046919021225,0.347140501607594,1.69592382577203,2.09749718104953,0.275118041940067,1.04497483268405,1.29208379584664,1.77883131343355,1.67360306382335,3.22263453687318,0,2.4406205754817,0.735326160691737,1.62028389576352,0.714397826272638,0.673588117878509,0.563057402416611,3.06633274931766,0,0.916008719652036,0,3.87780264148325,2.61656431285521,1.98788780678127,0.886413581652058,2.64818361626438,2.29469296599051,1.06400514659507,1.12135520028461,1.06748995729705,1.2333377420858,1.8672662123986,0.808264032418128,0.817309515567294,1.96764655938411,1.72852777344,1.64025002283658,1.5608003841516,1.1409436430889,0.149448680551801,0.117434498643765,0.161872944368132,0.280901613404497,0.816616685019573,0.122834317311768,1.23990937410919,2.37600571456411,0.741800787835671,2.73048408581408,3.59309070908119,0.168336113954066,0.375355559615893,1.10825646193673,1.31693286264251,0.612975591598039,2.25357088359895,0.113432183160021,3.7671823494661,2.13557388818567,1.48352330811693,3.30100205692843,1.95799805553034,7.47157566132325,1.8611685633159,1.5189869901714,1.94874010322397,4.03894038790583,2.11714766877288,5.98090410229604,5.32514388774922,1.20902517873168,1.69560592310488,0.386521706326594,0,0,0.121973706129595,0.397589304964456,0.464775771478074,0.207322110030741,0,0,1.56449532329816,3.21620469096443,2.76269842704961,3.25057549622385,0.721879481669586,0.354920400119532,0,0,0.220587945464788,0.217879444092406,0.474541238222193,0.134831308160164,0,0.38474715694639,0.738155454624648,0,2.4694440679884,2.94017422771084,2.53510069643662,2.94848165003288,1.77236972004421,0.882926198829301,0.245976877086227,0.514703430895577,0.878002283269004,0,0.201057944823262,1.11106134190236,1.3032332212413,0,0,1.62302566965108,0.70445216541493,1.87676382089396,0.462985512576611,0.761016608938393,3.1608175918371,2.57545848628462,0.246217006087397,0.234004265139238,0.148631162288728,0,0.503946384596579,0.425325291727159,0,0,0.766765358330422,0,0.880484340132261,4.35389042635621,5.90891809009542,4.29224273649692,0.63497894292169,1.52795370223311,3.51652341630141,0,0.514137463516618,0,1.14330573052231,0.336393253036082,0.87192013766656,0.36669142910475,1.93907573636667,0,0.845302752556,1.32969058292435,2.08014873822732,1.02882949704857,0,1.5985330740966,1.28680194292333,2.71310802695722,0,0,0.710783897485092,0.791951872933429,1.20575750823834,0.871533458600294,0.899756920638513,0,0,0,0.958499421966331,5.7430967917057,0,0.434343920002738,1.02738161275192,0.358121926479791,0,9.45747648969251,4.31255149719035,7.44389610422541,1.01637849688985,0,0,1.17261385734044,0,2.99602809578873,2.99161459204025,3.31532410748828,2.82190430954022,1.50051156317903,1.62759014219841,4.99130067673937,1.60586089917446,3.78485796081443,2.81139395982512,2.70851489754947,0,0,1.99267679560631,1.65932251687533,1.21637060255316,2.15381273209015,3.0882908142977,9.51132920165282,6.03999762292127,8.00456683525833,1.81876542867756,1.66435439510497,1.20956117331872,1.98486246255021,4.45039722535381,2.52594084989766,2.30650468660262,3.07024349440022,1.28683136914886,1.48418066444991,0.308419387605311,0.887808626565635,0.574890092096664,2.07701771673448,0.232420756919918,0,0.601519410909855,0.368323955743585,0.803701137152247,0.910455840033585,1.31124414959424,0.451199612907412,0.308061348417659,1.56869953835371,0,0.527758144464379,1.13733384070897,1.36074964221213,1.0795795805107,1.54227252690289,2.43851793789468,3.01013864312912,0.509752546090077,1.66215201785745,0,0.219259876645935,0,0.512900250232778,1.96808787419823,1.62689197332152,3.29731237272711,0.183138929636687,0.165018999841176,1.72279661398852,0,0,1.45006077438183,0.770243085573222,0.15350367472613,0.137836572484531,1.07420244868274,1.45016693914229,0.0852266274161009,1.24644849905432,0.495854746082934,1.53752053892085,1.40373983744043,0.6069466851333,0.464845549297286,4.7221852024596,0.6970372701606,0.616067160352178,0,1.73986598415015,0.37064843820784,1.43124886741991,1.116475108079,0.316379424718726,1.33441135746677,1.27948895655667,0.42793898803392,2.22742273548156,1.56989728039846,0.359744915166629,0.823611089208164,1.17812402345686,0.606547444719948,3.17020642346017,0.842516912477962,1.46290121726877,0.974853958525138,3.16950440270266,0.682499557039929,2.12108147930569,1.13008116620243,2.75682671773062,1.99031692572366,1.75380354101505,3.47265320560013,1.9676842561399,1.21746226177622,0,0.845086807596724,1.14729081763241,0.294747123039363,1.78335525740625,1.77380532035299,2.11107635297664,3.29294892959902,0,2.0996083214699,0.384888450902048,0.670302275535787,0,3.48332062874083,0.86101074534246,3.36942951335251,1.7737206141467,0.689170200620878,9.64150457541122,8.41100927856613,5.12682468456746,11.6733569974317,9.04997000789627,7.78167973431261,5.94034580961926,5.55187623405989,0,0.962479855263359,0,1.11481905075431,0.432807638929335,1.42283686696828,0,0.798317485731266,0.5745161103971,2.32840940996271,0.324621940274555,1.96558024679421,0,0.156679895773023,2.50634477090067,0.50787533340481,0.321176150207399,0.201799707191048,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,3.36968812325356,0,0.111443384277478,0,1.19372242368845,0.890894042497916,3.99308912729002,4.97073823883149,6.04878490565205,3.11664374064136,0,4.01138275443188,9.96239941255349,5.24939439509181,0.755798243562828,2.86352311006033,0.123084805461069,1.55519793830904,0.269605053441981,0.358042349351218,0.511572370226872,7.69418563968082,0,0,10.6626602070474,5.00947730073997,0,2.3438498497671,0.962059999958153,2.89999830173917,1.137934482855,1.77977555204936,0.472775363535873,0.689486746482929,0,0.694499979733169,4.42870692906919,6.99459344027366,6.10326945268333,11.5002430328474,4.13766666534966,2.63262476584767,1.19832309870889,0,5.46346835376959,1.02547850262301,0,0,0,0,0.366390373607449,1.5991043280559,0,0.784901281975124,0.166211681900156,0,0,0,0,0.317873157960757,0,0.489698424477443,0,0.432777279484182,8.95735737970654,4.5113357896703,4.27721101453538,0,0,0.104421949505455,12.6040118673866,12.8412423567806,7.96499115466153,0.547364367646998,0.586993856796269,0.971121518136371,4.3404284313433,0,1.83643656978294,1.45329133145522,0.150323419414493,0.103688191397247,1.32930774541437,0.330991955875499,0,0,0.284609546029793,0.970722711091971,0.173559738335131,0.489961987071888,0,3.66926003308263,0.51595809741485,0,0,0,3.29762656060626,0.882561266915003,6.32746074185491,0.685209623233754,0.19871461170299,5.82459322794084,0.391102765469606,0.160317640503067,5.97668385270187,0.39961921916426,2.73771792592801,0.458146384663663,2.74551996579143,0.14405479798815,0.621262677827163,1.41416420770077,1.08723364858891,1.255234155748,0.611989305817931,2.31160471921215,7.20504346451747,8.76194424908756,0,1.71906176567983,0,5.02708322290058,8.24977526442061,0.717873024576814,4.19325901047881,12.4475553959606,3.34757186162809,4.63565960158411,1.80149941771202,1.16495949527454,0.551482276150566,0.0824158583811665,0.539228350833479,1.27955725969173,0,3.97614844904652,6.1291532750209,0.160753148465019,0.137539436597234,0,0,1.5476039091159,5.28521142924815,0.670869375198532,1.33969702408637,3.04236611182989,0.422401346077626,1.07572403599707,0.959575986597226,5.00286728461357,4.63464379255802,0.25426853765475,1.08599920350743,0.864221491201268,1.63293680054705,2.39460383124975,0.164185041498678,1.87426823963964,2.03961764736226,1.61207457045891,0,3.87848869084652,6.74386268887719,1.36869470307464,0,3.9511342650047,5.97376359378731,5.38510771951354,8.43482237080316,0,0.487170393523584,0,1.63205341010842,1.5041393641362,1.22538230705385,2.62298104567844,1.09937867375164,8.86068179966986,5.00307686098049,7.63664677309649,2.29363678276028,6.98853024682169,6.20964029413835,1.798532254171,0.624902039810533,0.758245587708239,1.7127920012698,1.41159491818903,0.468334905806882,2.02889440055155,0.597019211547496,0.467426619694449,1.10961172300523,2.65164207385125,2.51567901752575,3.55924488638614,0.457680136793847,1.96600200892211,0.777186002913902,0.887130899937803,0.955780602982214,2.24901556081802,0.310525913752519,0.829412415681711,1.86089200190596,1.04349012362347,1.50257608997218,1.52322084867518,0.813741466409323,0.909243296012797,1.71856891267982,1.85613503951397,0.398095888698616,0.400027764663154,1.71697852591396,1.01024846629776,2.52369796457302,0,0,0,0.453411851024545,1.15761237161917,0.734210113519403,0.71635536432595,0.308801447160972,1.75427239662966,1.41351316756705,0,1.35153952522458,0.256241518587947,0.345430341731199,1.21543982470953,7.46595555219346,1.36402216187572,1.0629187225069,0.981392365535065,1.63804924423206,0.737318726261158,0,0.59996218756479,0,0.344429959321631,1.70254786070051,1.47284760201473,0,0,2.42999305476938,0.323474434190045,3.30258477897382,1.20130602011215,2.54598794931038,3.82634856183029,1.23935764259002,1.11728983594649,0.636008701306837,0.630893960010027,0,2.1160556621441,1.531227386766,5.90908870887428,7.08482881627925,8.93949610720047,6.15349092722265,1.76450187355203,5.60173744960165,6.45902582527404,18.5600246336901,0,0.11796972334774,4.03542916747694,0.115525666150338,1.1441462864015,0.690359926060101,0.795664888465099,4.51261970095543,0.80682027481408,4.68908406739856,0,1.14640342257068,0.887136517302272,5.53808193870836,9.37293718336617,6.61397748803789,6.84890750094194,1.09394961803644,6.57909320228619,5.45832296228224,2.28632617667507,1.53314913167514,3.74991285114801,5.71682327772001,2.42786241694653,6.14687916648504,1.06442844195167,0.691403925334676,7.88844843412125,4.21412344456357,5.52491297927932,0,0.667388411352415,7.69232309935037,5.81327682689207,0,0.913158720509496,0,0.47775168788705,5.21778772489591,0,0.348724276104376,0.173858272302579,2.40513409419076,0.828864656652147,2.56077715640925,4.83881763269864,11.6161386881475,0.473328002922261,0.340853619036631,8.04435395362765,1.8328549483524,0.31020638566432,0,1.4541206133713,0.392600934460972,1.09726132484042,7.12171720906684,4.92781472909986,5.799072156691,3.39997695141398,1.16969731731053,2.58636007709779,0.594600453887843,1.01651473835064,0,4.37792246343353,1.54348316215889,0.874238242015829,1.88126918544609,12.2574160876953,4.47785439493089,3.92616934229891,6.83206720752298,2.9585900930838,2.20905249094162,4.41724414505312,3.93193116638821,0.199882311849858,0.535661815816973,0.705789743431384,1.68506870047253,0.730336388246517,3.66983426723633,8.60037498908708,0.473314686579554,5.50731070546409,2.18175345170189,5.290268405154,1.85997509083376,6.00828317220844,1.73050624849516,0.126166424835079,0.109265571963696,0.506794004045748,0,0.26721740526556,0,0,2.1218035501107,2.67964130156179,10.7792027129641,11.894794524118,5.97055149322747,4.76128862927481,5.10252387704448,5.33842542944378,1.23345048838675,5.60094992847851,6.2656328577048,3.48346796635138,3.08009970976753,5.25346013513783,3.51438806424114,3.65926392200615,0.244209805832924,0.747091421144008,1.9307228228694,2.96423166951737,4.69281884806909,12.2241444182866,2.84827324821017,11.9836219353392,7.648404156459,0.320568492303233 | |||
|short_description=p6@NUMA1 | |||
}} |
Latest revision as of 00:19, 20 September 2015
Short description: | p6@NUMA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_NUMA1_5end |
Coexpression cluster: | NA |
Association with transcript: | -55bp_to_ENST00000537930_5end |
EntrezGene: | NUMA1 |
HGNC: | 8059 |
UniProt: | F5H2F3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.46e-10 | 18 |
alpha-beta T cell | 2.46e-10 | 18 |
immature T cell | 2.46e-10 | 18 |
mature T cell | 2.46e-10 | 18 |
immature alpha-beta T cell | 2.46e-10 | 18 |
CD8-positive, alpha-beta T cell | 7.45e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
adult organism | 4.24e-46 | 114 |
neural tube | 1.45e-18 | 56 |
neural rod | 1.45e-18 | 56 |
future spinal cord | 1.45e-18 | 56 |
neural keel | 1.45e-18 | 56 |
regional part of nervous system | 1.57e-17 | 53 |
regional part of brain | 1.57e-17 | 53 |
brain | 1.08e-14 | 68 |
future brain | 1.08e-14 | 68 |
regional part of forebrain | 2.27e-14 | 41 |
forebrain | 2.27e-14 | 41 |
anterior neural tube | 2.27e-14 | 41 |
future forebrain | 2.27e-14 | 41 |
neurectoderm | 2.60e-13 | 86 |
neural plate | 7.95e-13 | 82 |
presumptive neural plate | 7.95e-13 | 82 |
central nervous system | 2.71e-12 | 81 |
telencephalon | 2.88e-11 | 34 |
nervous system | 3.13e-11 | 89 |
brain grey matter | 5.26e-11 | 34 |
gray matter | 5.26e-11 | 34 |
regional part of telencephalon | 3.22e-10 | 32 |
cerebral hemisphere | 4.40e-10 | 32 |
regional part of cerebral cortex | 3.36e-09 | 22 |
pre-chordal neural plate | 3.87e-09 | 61 |
ecto-epithelium | 1.82e-08 | 104 |
neocortex | 2.02e-08 | 20 |
structure with developmental contribution from neural crest | 2.03e-07 | 132 |
cerebral cortex | 5.66e-07 | 25 |
pallium | 5.66e-07 | 25 |