FFCP PHASE1:Hg19::chr12:54359771..54359813,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:54359771..54359813,+ | |||
|coexpression_cluster_id=C15 | |||
|description=CAGE_peak_at_chr12:54359771..54359813,+ | |||
|id=chr12:54359771..54359813,+ | |||
|ontology_enrichment_celltype=CL:0002594!9.07e-14!4;CL:0000594!1.64e-10!3;CL:0000188!3.30e-09!9;CL:0002588!1.51e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002594;7.09e-24;4!CL:0000188;3.33e-19;9!CL:0000594;3.99e-15;3!CL:0000680;3.88e-14;7!CL:0000187;4.53e-07;55!CL:0000393;4.79e-07;61!CL:0000211;4.79e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0002594,1.38e-23,4;CL:0000188,3.18e-19,9;CL:0000594,3.22e-15,3;CL:0000680,2.02e-13,58;CL:0000056,2.02e-13,58;CL:0000355,2.02e-13,58;CL:0000187,3.21e-11,55;CL:0000393,5.01e-10,61;CL:0000211,5.01e-10,61;CL:0000222,2.90e-07,121 | |||
|ontology_enrichment_development_v019=UBERON:0004874;1.01e-11;1!CL:0000355;1.01e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3369;1.01e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3369,8.64e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0001310!9.07e-14!4;UBERON:0002385!5.24e-07!63;UBERON:0001015!5.24e-07!63;UBERON:0000383!5.24e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0001310;7.09e-24;4!UBERON:0010260;1.17e-18;9!UBERON:0001134;1.73e-16;16!UBERON:0002036;1.73e-16;16!UBERON:0000989;1.01e-11;1!UBERON:0008811;1.01e-11;1!UBERON:0002385;1.86e-08;31!UBERON:0001015;1.86e-08;31!UBERON:0000383;1.86e-08;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001310,1.38e-23,4;UBERON:0010260,2.22e-18,9;UBERON:0001134,1.75e-12,62;UBERON:0002036,1.75e-12,62;UBERON:0003082,1.75e-12,62;UBERON:0002385,4.68e-12,64;UBERON:0001015,4.68e-12,64;UBERON:0000383,4.68e-12,64;UBERON:0000989,9.61e-12,1;UBERON:0008811,9.61e-12,1;UBERON:0006258,9.61e-12,1;UBERON:0005876,9.61e-12,1;UBERON:0004874,9.61e-12,1;UBERON:0000486,3.13e-11,83;UBERON:0002329,9.38e-11,71;UBERON:0003059,9.38e-11,71;UBERON:0007282,9.38e-11,71;UBERON:0004290,9.38e-11,71;UBERON:0009618,9.38e-11,71;UBERON:0003077,1.37e-10,72;UBERON:0007285,1.37e-10,72;UBERON:0007524,1.99e-10,73;UBERON:0007503,1.10e-09,78;UBERON:0005256,3.63e-07,122 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.783556884599516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.772921620136887,0.18611685633159,0,0,0,0,0,0,0,1.86516651541536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0.26593811658487,0,0.257207374262142,0,0,0,0,3.29296134712308,0.325736184293735,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,1.84928690295345,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0.60818530127658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03008508413456,0,0,0,1.50388342815583,3.33538396002726,0.0852266274161009,2.04773681987496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01455188481352,0.6196469961995,1.40847801266121,1.00387946542836,0.491245205065606,1.07001315444375,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.640944426764839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.284136146806413,0,0,0,0,0,0,0,17.9456596908794,0.19924798825107,0,0,0.102268682502155,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0.271808412147228,0.627617077873999,1.22397861163586,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365377795142688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982829546539238,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0.425149840203366,0.247871528518004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5913297769302,0,0,0,0,0,0,0,0,0,0,0,0,1.48863353516788,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.44106993273063,0.695433089210318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307988420568741,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,1.2679671827502,0.339854229375634,0,0,0,0,0,0,0,0,0,2.0510303085114,0,0,0,0.743990036333503,0,0.432626562123789,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr12:54359771..54359813,+ | |||
}} |
Latest revision as of 09:55, 24 July 2015
Short description: | p@chr12:54359771..54359813, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:54359771..54359813, + |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the umbilical artery | 1.38e-23 | 4 |
cell of skeletal muscle | 3.18e-19 | 9 |
skeletal muscle satellite cell | 3.22e-15 | 3 |
muscle precursor cell | 2.02e-13 | 58 |
myoblast | 2.02e-13 | 58 |
multi-potent skeletal muscle stem cell | 2.02e-13 | 58 |
muscle cell | 3.21e-11 | 55 |
electrically responsive cell | 5.01e-10 | 61 |
electrically active cell | 5.01e-10 | 61 |
mesodermal cell | 2.90e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
umbilical artery | 1.38e-23 | 4 |
umbilical blood vessel | 2.22e-18 | 9 |
skeletal muscle tissue | 1.75e-12 | 62 |
striated muscle tissue | 1.75e-12 | 62 |
myotome | 1.75e-12 | 62 |
muscle tissue | 4.68e-12 | 64 |
musculature | 4.68e-12 | 64 |
musculature of body | 4.68e-12 | 64 |
penis | 9.61e-12 | 1 |
intromittent organ | 9.61e-12 | 1 |
lateral plate mesenchyme | 9.61e-12 | 1 |
undifferentiated genital tubercle | 9.61e-12 | 1 |
somatopleure | 9.61e-12 | 1 |
multilaminar epithelium | 3.13e-11 | 83 |
somite | 9.38e-11 | 71 |
presomitic mesoderm | 9.38e-11 | 71 |
presumptive segmental plate | 9.38e-11 | 71 |
dermomyotome | 9.38e-11 | 71 |
trunk paraxial mesoderm | 9.38e-11 | 71 |
paraxial mesoderm | 1.37e-10 | 72 |
presumptive paraxial mesoderm | 1.37e-10 | 72 |
dense mesenchyme tissue | 1.99e-10 | 73 |
epithelial vesicle | 1.10e-09 | 78 |
trunk mesenchyme | 3.63e-07 | 122 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 8.64e-12 | 1 |