FFCP PHASE1:Hg19::chr12:66036125..66036136,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=5bp_to_ENST00000539653_5end | |||
|cluster_id=chr12:66036125..66036136,- | |||
|coexpression_cluster_id=C341 | |||
|description=CAGE_peak_2_at_ENST00000539653_5end | |||
|id=chr12:66036125..66036136,- | |||
|ontology_enrichment_celltype=CL:0002551!3.35e-21!6;CL:0000188!4.21e-14!9;CL:0000055!3.87e-13!180;CL:0000148!1.88e-08!10;CL:0000541!1.88e-08!10;CL:0002567!4.82e-08!3;CL:0002573!5.73e-08!2;CL:0000322!1.48e-07!3;CL:0000594!1.99e-07!3;CL:0002620!2.21e-07!23;CL:0000183!9.73e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002551;6.46e-22;6!CL:0002567;9.99e-20;3!CL:0002573;1.68e-19;2!CL:0000054;1.86e-08;2!CL:0002596;1.86e-08;2!CL:0000137;1.86e-08;2!CL:0000092;1.86e-08;2!CL:0000188;2.86e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002551,7.72e-22,6;CL:0002567,9.53e-20,3;CL:0002573,1.53e-19,2;CL:0002596,2.00e-08,2;CL:0000054,2.15e-08,2;CL:0000137,2.15e-08,2;CL:0000092,2.15e-08,2;CL:0000188,2.60e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060085;1.34e-15;1!DOID:3165;1.34e-15;1!DOID:0060121;1.34e-15;1!DOID:2438;1.34e-15;1!DOID:4418;1.34e-15;1!DOID:200;1.86e-08;2!DOID:4305;1.86e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,1.78e-15,1;DOID:3165,1.78e-15,1;DOID:0060121,1.78e-15,1;DOID:2438,1.78e-15,1;DOID:4418,1.78e-15,1;DOID:200,2.15e-08,2;DOID:4305,2.15e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0002067!4.58e-14!9;UBERON:0004016!4.58e-14!9;UBERON:0010083!4.58e-14!9;UBERON:0004290!3.22e-11!70;UBERON:0000486!3.75e-09!82;UBERON:0000914!5.24e-09!83;UBERON:0002329!5.24e-09!83;UBERON:0003077!5.24e-09!83;UBERON:0003059!5.24e-09!83;UBERON:0007282!5.24e-09!83;UBERON:0009618!5.24e-09!83;UBERON:0007285!5.24e-09!83;UBERON:0004821!1.48e-07!3;UBERON:0003215!1.48e-07!3;UBERON:0002299!1.48e-07!3;UBERON:0006524!1.48e-07!3;UBERON:0008874!1.48e-07!3;UBERON:0002169!1.48e-07!3;UBERON:0004894!1.48e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002067;7.70e-15;9!UBERON:0005396;1.86e-08;2!UBERON:0000010;4.02e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002067,8.67e-15,9;UBERON:0004016,8.67e-15,9;UBERON:0010083,8.67e-15,9;UBERON:0005396,2.00e-08,2;UBERON:0000010,3.90e-07,8;UBERON:0002329,6.19e-07,71;UBERON:0003059,6.19e-07,71;UBERON:0007282,6.19e-07,71;UBERON:0004290,6.19e-07,71;UBERON:0009618,6.19e-07,71;UBERON:0003077,7.81e-07,72;UBERON:0007285,7.81e-07,72;UBERON:0007524,9.79e-07,73 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0.149448680551801,6.6937664226946,2.10434827678571,1.54495887372473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.698476837213859,2.67391897890794,1.17217447210047,0,0.514137463516618,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,2.60588947434988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355123450626254,0.410635780069046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7728751080636,2.45605879561807,0.827019434907183,0.107420244868274,0,0.596586391912706,0,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,2.35484592059769,0,0,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853828638089378,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,2.18586072873289,0,0,0,0,0,0,0,0,0,24.3534969708248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.1952898506815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554805861502613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.844712203265363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30165200803622,1.70426809518315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356760272332706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@ENST00000539653 | |||
}} |
Latest revision as of 11:26, 24 July 2015
Short description: | p2@ENST00000539653 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000539653_5end |
Coexpression cluster: | C341_giant_large_Fibroblast_Mesenchymal_Alveolar_Mesothelial_mesothelioma |
Association with transcript: | 5bp_to_ENST00000539653_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of dermis | 7.72e-22 | 6 |
light melanocyte | 9.53e-20 | 3 |
Schwann cell | 1.53e-19 | 2 |
smooth muscle cell of the carotid artery | 2.00e-08 | 2 |
bone matrix secreting cell | 2.15e-08 | 2 |
osteocyte | 2.15e-08 | 2 |
osteoclast | 2.15e-08 | 2 |
cell of skeletal muscle | 2.60e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
dermis | 8.67e-15 | 9 |
dermatome | 8.67e-15 | 9 |
future dermis | 8.67e-15 | 9 |
carotid artery segment | 2.00e-08 | 2 |
peripheral nervous system | 3.90e-07 | 8 |
somite | 6.19e-07 | 71 |
presomitic mesoderm | 6.19e-07 | 71 |
presumptive segmental plate | 6.19e-07 | 71 |
dermomyotome | 6.19e-07 | 71 |
trunk paraxial mesoderm | 6.19e-07 | 71 |
paraxial mesoderm | 7.81e-07 | 72 |
presumptive paraxial mesoderm | 7.81e-07 | 72 |
dense mesenchyme tissue | 9.79e-07 | 73 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 1.78e-15 | 1 |
skin benign neoplasm | 1.78e-15 | 1 |
integumentary system benign neoplasm | 1.78e-15 | 1 |
dermis tumor | 1.78e-15 | 1 |
cutaneous fibrous histiocytoma | 1.78e-15 | 1 |
giant cell tumor | 2.15e-08 | 2 |
bone giant cell tumor | 2.15e-08 | 2 |