FFCP PHASE1:Hg19::chr13:103532691..103532727,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:103532691..103532727,+ | |||
|coexpression_cluster_id=C197 | |||
|description=CAGE_peak_at_chr13:103532691..103532727,+ | |||
|id=chr13:103532691..103532727,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004874;7.06e-34;1!UBERON:0008814;5.48e-18;2!UBERON:0010056;5.48e-18;2!UBERON:0005062;1.44e-09;4!UBERON:0007284;1.44e-09;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.02e-20!115;UBERON:0000341!1.27e-16!2;UBERON:0001723!8.35e-12!3;UBERON:0001033!8.35e-12!3;UBERON:0010056!8.35e-12!3;UBERON:0002146!2.04e-09!1;UBERON:0005623!2.04e-09!1;UBERON:0000989!2.22e-09!1;UBERON:0008811!2.22e-09!1;UBERON:0006258!2.22e-09!1;UBERON:0005876!2.22e-09!1;UBERON:0004874!2.22e-09!1;UBERON:0002702!3.05e-09!1;UBERON:0002079!3.31e-09!1;UBERON:0002372!3.58e-09!1;UBERON:0001961!3.58e-09!1;UBERON:0001744!3.58e-09!1;UBERON:0001735!3.58e-09!1;UBERON:0007029!3.88e-09!1;UBERON:0001736!4.19e-09!1;UBERON:0006298!4.19e-09!1;UBERON:0001882!6.22e-09!1;UBERON:0005403!6.22e-09!1;UBERON:0000153!6.29e-09!129;UBERON:0007811!6.29e-09!129;UBERON:0000369!1.98e-08!4;UBERON:0002435!1.98e-08!4;UBERON:0000204!1.98e-08!4;UBERON:0010082!1.98e-08!4;UBERON:0002780!5.55e-08!41;UBERON:0001890!5.55e-08!41;UBERON:0006240!5.55e-08!41;UBERON:0003080!8.87e-08!42;UBERON:0001042!9.31e-08!10;UBERON:0009145!9.31e-08!10;UBERON:0001869!1.00e-07!32;UBERON:0002791!1.75e-07!33;UBERON:0002020!2.95e-07!34;UBERON:0003528!2.95e-07!34;UBERON:0001893!2.95e-07!34;UBERON:0000078!3.07e-07!18;UBERON:0006562!4.32e-07!11;UBERON:0007100!4.34e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;6.25e-45;3!UBERON:0001033;6.25e-45;3!UBERON:0002146;5.05e-34;1!UBERON:0005623;5.05e-34;1!UBERON:0000989;7.06e-34;1!UBERON:0008811;7.06e-34;1!UBERON:0000341;6.48e-18;2!UBERON:0003127;1.27e-17;2!UBERON:0003978;2.59e-12;3!UBERON:0000946;2.59e-12;3!UBERON:0000974;7.58e-07;6!UBERON:0000020;9.13e-07;23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,6.25e-45,3;UBERON:0001033,6.25e-45,3;UBERON:0010056,6.25e-45,3;UBERON:0002146,5.05e-34,1;UBERON:0005623,5.05e-34,1;UBERON:0000989,7.06e-34,1;UBERON:0008811,7.06e-34,1;UBERON:0006258,7.06e-34,1;UBERON:0005876,7.06e-34,1;UBERON:0004874,7.06e-34,1;UBERON:0000341,6.48e-18,2;UBERON:0003127,1.27e-17,2;UBERON:0001042,2.66e-14,10;UBERON:0009145,2.66e-14,10;UBERON:0006562,4.25e-13,11;UBERON:0003978,2.59e-12,3;UBERON:0009751,2.59e-12,3;UBERON:0000946,2.59e-12,3;UBERON:0002523,2.59e-12,3;UBERON:0005983,2.59e-12,3;UBERON:0002165,2.59e-12,3;UBERON:0002062,2.59e-12,3;UBERON:0007280,2.59e-12,3;UBERON:0008814,2.17e-08,18;UBERON:0003103,2.48e-08,68;UBERON:0001557,5.35e-08,19;UBERON:0000072,4.59e-07,47;UBERON:0000166,4.94e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.58320848023367,0,0,0.429226048136571,0.89268582976749,0.403100834920358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97726707033577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0.458729283404541,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4484651131481,0.23806443146374,0,0,0,0,0.404234377916439,18.5059235712417,6.50243272062034,0.5388164241167,0,1.33064142618405,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr13:103532691..103532727,+ | |||
}} |
Latest revision as of 14:20, 24 July 2015
Short description: | p@chr13:103532691..103532727, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:103532691..103532727, + |
Coexpression cluster: | C197_tongue_esophagus_tonsil_salivary_cervix_nasal_Gingival |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tongue | 6.25e-45 | 3 |
gustatory system | 6.25e-45 | 3 |
future tongue | 6.25e-45 | 3 |
pulmonary valve | 5.05e-34 | 1 |
semi-lunar valve | 5.05e-34 | 1 |
penis | 7.06e-34 | 1 |
intromittent organ | 7.06e-34 | 1 |
lateral plate mesenchyme | 7.06e-34 | 1 |
undifferentiated genital tubercle | 7.06e-34 | 1 |
somatopleure | 7.06e-34 | 1 |
throat | 6.48e-18 | 2 |
open tracheal system trachea | 1.27e-17 | 2 |
chordate pharynx | 2.66e-14 | 10 |
pharyngeal region of foregut | 2.66e-14 | 10 |
pharynx | 4.25e-13 | 11 |
valve | 2.59e-12 | 3 |
cardiac mesenchyme | 2.59e-12 | 3 |
cardial valve | 2.59e-12 | 3 |
tunica intima | 2.59e-12 | 3 |
heart layer | 2.59e-12 | 3 |
endocardium | 2.59e-12 | 3 |
endocardial cushion | 2.59e-12 | 3 |
presumptive endocardium | 2.59e-12 | 3 |
pharyngeal arch system | 2.17e-08 | 18 |
compound organ | 2.48e-08 | 68 |
upper respiratory tract | 5.35e-08 | 19 |
segment of respiratory tract | 4.59e-07 | 47 |
oral opening | 4.94e-07 | 22 |