FFCP PHASE1:Hg19::chr13:37494248..37494260,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4093 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6774 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=114bp_to_ENST00000350148_5end | |||
|cluster_id=chr13:37494248..37494260,- | |||
|coexpression_cluster_id=C3369 | |||
|description=CAGE_peak_3_at_SMAD9_5end | |||
|id=chr13:37494248..37494260,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.27e-10;82 | |||
|ontology_enrichment_disease=DOID:171!9.67e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:171;8.43e-10;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,5.29e-10,10 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.21e-29!94;UBERON:0001016!1.21e-29!94;UBERON:0002346!2.23e-29!90;UBERON:0005743!5.54e-28!86;UBERON:0001049!2.53e-27!57;UBERON:0005068!2.53e-27!57;UBERON:0006241!2.53e-27!57;UBERON:0007135!2.53e-27!57;UBERON:0007023!4.05e-27!115;UBERON:0003075!1.35e-26!86;UBERON:0007284!1.35e-26!86;UBERON:0001017!1.16e-25!82;UBERON:0000955!3.37e-24!69;UBERON:0006238!3.37e-24!69;UBERON:0002616!4.35e-21!59;UBERON:0003080!3.24e-18!42;UBERON:0002780!7.39e-18!41;UBERON:0001890!7.39e-18!41;UBERON:0006240!7.39e-18!41;UBERON:0003056!3.09e-17!61;UBERON:0000924!4.55e-17!173;UBERON:0006601!4.55e-17!173;UBERON:0004121!3.61e-15!169;UBERON:0000475!5.02e-15!365;UBERON:0000033!9.70e-15!123;UBERON:0000153!1.55e-14!129;UBERON:0007811!1.55e-14!129;UBERON:0002020!3.02e-14!34;UBERON:0003528!3.02e-14!34;UBERON:0001893!3.44e-14!34;UBERON:0002791!1.08e-13!33;UBERON:0001869!1.05e-12!32;UBERON:0000025!1.88e-12!194;UBERON:0000956!4.17e-11!25;UBERON:0000203!4.17e-11!25;UBERON:0004111!1.31e-10!241;UBERON:0002619!1.32e-10!22;UBERON:0003076!1.76e-10!15;UBERON:0003057!1.76e-10!15;UBERON:0000468!1.99e-10!659;UBERON:0000483!3.46e-10!309;UBERON:0000119!5.92e-10!312;UBERON:0000477!1.58e-09!286;UBERON:0001950!1.83e-09!20;UBERON:0004733!3.56e-08!12;UBERON:0002028!3.56e-08!12;UBERON:0007277!3.56e-08!12;UBERON:0000481!8.36e-08!347;UBERON:0004732!3.36e-07!13;UBERON:0000922!4.87e-07!612;UBERON:0000467!7.81e-07!625;UBERON:0002298!8.87e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;8.74e-13;53!UBERON:0002616;8.74e-13;53!UBERON:0002780;3.00e-11;41!UBERON:0001890;3.00e-11;41!UBERON:0004457;1.17e-10;9!UBERON:0000042;1.17e-10;9!UBERON:0002619;1.61e-10;22!UBERON:0001016;1.62e-10;83!UBERON:0001950;6.11e-10;20!UBERON:0003688;1.29e-09;6!UBERON:0002358;1.29e-09;6!UBERON:0003684;1.29e-09;6!UBERON:0001178;1.29e-09;6!UBERON:0002298;2.44e-09;6!UBERON:0001893;6.70e-09;34!UBERON:0000956;7.41e-09;25!UBERON:0000203;7.41e-09;25!UBERON:0001017;1.31e-08;75!UBERON:0004733;1.42e-08;12!UBERON:0002028;1.42e-08;12!UBERON:0003528;2.02e-08;34!UBERON:0002020;2.02e-08;34!UBERON:0000955;3.91e-08;68!UBERON:0004732;9.21e-08;13!UBERON:0001869;2.02e-07;32!UBERON:0002791;2.32e-07;32!UBERON:0001894;7.51e-07;7!UBERON:0002346;8.46e-07;4!UBERON:0000923;8.46e-07;4!UBERON:0010316;8.46e-07;4!UBERON:0005291;8.46e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.88e-25,89;UBERON:0001049,5.38e-25,56;UBERON:0005068,5.38e-25,56;UBERON:0006241,5.38e-25,56;UBERON:0007135,5.38e-25,56;UBERON:0001017,2.86e-23,81;UBERON:0002346,4.26e-23,86;UBERON:0000073,1.57e-21,53;UBERON:0002616,1.57e-21,53;UBERON:0000955,1.64e-20,68;UBERON:0006238,1.64e-20,68;UBERON:0007023,2.15e-20,114;UBERON:0003075,2.52e-19,82;UBERON:0007284,2.52e-19,82;UBERON:0002780,9.89e-15,41;UBERON:0001890,9.89e-15,41;UBERON:0003080,9.89e-15,41;UBERON:0006240,9.89e-15,41;UBERON:0010371,1.48e-13,104;UBERON:0004121,2.36e-13,171;UBERON:0000924,2.36e-13,171;UBERON:0006601,2.36e-13,171;UBERON:0010314,1.23e-12,132;UBERON:0003076,2.48e-12,15;UBERON:0003057,2.48e-12,15;UBERON:0011216,9.02e-12,223;UBERON:0003056,1.16e-11,61;UBERON:0002619,1.55e-10,22;UBERON:0003528,2.25e-10,34;UBERON:0002020,2.25e-10,34;UBERON:0001893,2.60e-10,34;UBERON:0001950,5.84e-10,20;UBERON:0003688,2.35e-09,6;UBERON:0002358,2.35e-09,6;UBERON:0003684,2.35e-09,6;UBERON:0001178,2.35e-09,6;UBERON:0002298,3.96e-09,6;UBERON:0004457,5.12e-09,12;UBERON:0000042,5.12e-09,12;UBERON:0000956,7.16e-09,25;UBERON:0000203,7.16e-09,25;UBERON:0002791,1.25e-08,32;UBERON:0004733,1.82e-08,12;UBERON:0002028,1.82e-08,12;UBERON:0007277,1.82e-08,12;UBERON:0001869,2.29e-08,32;UBERON:0004732,1.15e-07,13;UBERON:0000025,6.93e-07,192 | |||
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| |||
|short_description=p3@SMAD9 | |||
}} |
Latest revision as of 06:18, 17 September 2015
Short description: | p3@SMAD9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SMAD9_5end |
Coexpression cluster: | C3369_peripheral_thyroid_medulloblastoma_argyrophil_neuroblastoma_Adipocyte_neuroectodermal |
Association with transcript: | 114bp_to_ENST00000350148_5end |
EntrezGene: | SMAD9 |
HGNC: | 6774 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 5.29e-10 | 10 |