FFCP PHASE1:Hg19::chr8:18942279..18942294,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr8:18942279..18942294,-
|short_description=p11@PSD3
|description=CAGE_peak_11_at_PSD3_5end
|association_with_transcript=-39bp_to_ENST00000521475_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23362 | |EntrezGene=23362 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19093 | |HGNC=19093 | ||
|TSSclassifier=strong | |||
|UniProt=E5RIH3 | |UniProt=E5RIH3 | ||
|association_with_transcript=-39bp_to_ENST00000521475_5end | |||
|cluster_id=chr8:18942279..18942294,- | |||
|coexpression_cluster_id=C1542 | |||
|description=CAGE_peak_11_at_PSD3_5end | |||
|id=chr8:18942279..18942294,- | |||
|ontology_enrichment_celltype=CL:0000055!8.30e-33!180;CL:0000057!9.79e-26!75;CL:0002620!2.00e-15!23;CL:0000048!2.34e-11!430;CL:0000723!1.63e-10!436;CL:0000034!1.88e-09!444;CL:0000680!7.57e-08!57;CL:0000056!7.57e-08!57;CL:0000355!7.57e-08!57;CL:0002320!8.61e-08!365;CL:0002371!1.62e-07!591;CL:0000499!2.92e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0002620;7.46e-21;23!CL:0000680;4.90e-10;7!CL:0000057;1.36e-09;73!CL:0002320;1.24e-08;188!CL:0002552;1.27e-08;5!CL:0000153;1.93e-07;9!CL:0000447;1.93e-07;9!CL:0000056;6.44e-07;4!CL:0000723;8.74e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,8.64e-23,76;CL:0002620,4.34e-21,23;CL:0000048,1.31e-12,427;CL:0000723,4.59e-12,433;CL:0000034,2.30e-11,441;CL:0002320,8.84e-10,361;CL:0002552,8.91e-09,5;CL:0000134,6.11e-08,354;CL:0000219,1.50e-07,386;CL:0000153,2.10e-07,9;CL:0000447,2.10e-07,9;CL:0000515,5.81e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000515;6.44e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;5.39e-09;5!DOID:450;5.39e-09;5!DOID:66;5.39e-09;5!DOID:423;5.39e-09;5!DOID:0080000;5.39e-09;5!DOID:11722;5.39e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,5.61e-09,5;DOID:450,5.61e-09,5;DOID:66,5.61e-09,5;DOID:423,5.61e-09,5;DOID:0080000,5.61e-09,5;DOID:11722,5.61e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.29e-14!83;UBERON:0002329!1.29e-14!83;UBERON:0003077!1.29e-14!83;UBERON:0003059!1.29e-14!83;UBERON:0007282!1.29e-14!83;UBERON:0009618!1.29e-14!83;UBERON:0007285!1.29e-14!83;UBERON:0004290!1.07e-11!70;UBERON:0000475!1.23e-11!365;UBERON:0005256!1.47e-11!143;UBERON:0002199!9.90e-11!45;UBERON:0002416!9.90e-11!45;UBERON:0002097!1.36e-10!40;UBERON:0003102!7.31e-10!95;UBERON:0002384!3.60e-09!375;UBERON:0000486!3.81e-09!82;UBERON:0000481!2.51e-08!347;UBERON:0002385!6.13e-08!63;UBERON:0001015!6.13e-08!63;UBERON:0000383!6.13e-08!63;UBERON:0001134!1.20e-07!61;UBERON:0002036!1.20e-07!61;UBERON:0003082!1.20e-07!61;UBERON:0002067!3.33e-07!9;UBERON:0004016!3.33e-07!9;UBERON:0010083!3.33e-07!9;UBERON:0000479!5.91e-07!787 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;5.07e-12;41!UBERON:0001434;1.40e-09;36!UBERON:0000075;1.44e-09;16!UBERON:0002384;3.28e-09;198!UBERON:0004905;9.94e-09;8!UBERON:0000982;9.94e-09;8!UBERON:0004770;9.94e-09;8!UBERON:0002199;1.05e-08;46!UBERON:0002416;1.05e-08;46!UBERON:0003102;1.60e-08;50!UBERON:0011135;7.63e-08;5!UBERON:0002216;7.63e-08;5!UBERON:0011134;7.63e-08;5!UBERON:0002209;7.63e-08;5!UBERON:0002213;7.63e-08;5!UBERON:0007844;7.63e-08;5!UBERON:0011138;7.63e-08;5!UBERON:0001130;7.63e-08;5!UBERON:0001066;7.63e-08;5!UBERON:0001468;7.63e-08;5!UBERON:0002067;1.03e-07;9!UBERON:0002204;6.55e-07;70!UBERON:0004765;7.43e-07;26 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,3.11e-16,41;UBERON:0002199,7.17e-15,46;UBERON:0002416,7.17e-15,46;UBERON:0003102,7.56e-14,99;UBERON:0002384,4.55e-11,371;UBERON:0007524,1.58e-10,73;UBERON:0002329,2.95e-10,71;UBERON:0003059,2.95e-10,71;UBERON:0007282,2.95e-10,71;UBERON:0004290,2.95e-10,71;UBERON:0009618,2.95e-10,71;UBERON:0003077,5.30e-10,72;UBERON:0007285,5.30e-10,72;UBERON:0000075,2.21e-09,16;UBERON:0000486,3.63e-09,83;UBERON:0004905,9.66e-09,8;UBERON:0000982,9.66e-09,8;UBERON:0004770,9.66e-09,8;UBERON:0007503,1.25e-08,78;UBERON:0002067,4.98e-08,9;UBERON:0004016,4.98e-08,9;UBERON:0010083,4.98e-08,9;UBERON:0011135,6.47e-08,5;UBERON:0002216,6.47e-08,5;UBERON:0011134,6.47e-08,5;UBERON:0002209,6.47e-08,5;UBERON:0002213,6.47e-08,5;UBERON:0005856,6.47e-08,5;UBERON:0005866,6.47e-08,5;UBERON:0005863,6.47e-08,5;UBERON:0007844,6.47e-08,5;UBERON:0011138,6.47e-08,5;UBERON:0001130,6.47e-08,5;UBERON:0001066,6.47e-08,5;UBERON:0001468,6.47e-08,5;UBERON:0003104,3.28e-07,160;UBERON:0009142,3.28e-07,160;UBERON:0011137,4.49e-07,14 | |||
|phase1_expression=0,0,0.281908808191942,0,0.446961094427288,0,0,0.631719873426831,0,0,0,0,0,6.80714941280256,4.30816588446291,0,0,0,0,0.861847406537515,0,0,0.572471974262113,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.255725123687061,2.89151321907653,2.50668955317945,1.15877215168659,3.9764297352555,5.35298357332899,0.378139268656271,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.45457927542978,0,1.85372853138506,6.88407889797153,1.41867352879343,0.560677600142307,0,0,2.17847724779836,0.134710672069688,0.163461903113459,0.302714855289863,0.576175924479999,0.234321431833797,0.624320153660641,0.570471821544449,2.83952493048422,1.996386476944,2.75184005425824,1.82586048712923,9.39109187772509,1.84251475967652,7.64610780700664,7.12801714369232,7.17074094907815,0,0,1.0100166837244,0.875829639103749,7.75779523355712,3.07284334616587,3.67785354958824,7.21142682751665,0,8.43131287737651,5.33893472046419,4.23863802319124,13.2040082277137,5.66788910811414,18.034837803194,4.28068769562657,3.37552664482532,0.876933046450788,21.961738359238,4.14224543890347,1.13152239773168,15.9754316632476,3.92933183087797,2.7129694769678,0,0,0,0,0,0,0,0,0,14.0804579096834,7.07565032012174,5.52539685409922,1.39310378409594,0.721879481669586,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.4115740113314,0,0,0.982827216677626,1.77236972004421,0,0,1.02940686179115,0,0,0,0,0.325808305310325,1.03993478527958,0,0.115930404975077,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.12624243342638,0.063497894292169,0,0,0,0,0,0,1.00917975910825,0,0.95339771567235,0.258543431515556,3.57656445851882,0,0.797814349754612,1.04007436911366,1.02882949704857,0,0.799266537048298,5.43316375900961,0.542621605391443,3.29296134712308,1.62868092146868,3.55391948742546,1.58390374586686,0,0,0,0,0,0,0.958499421966331,0,1.42636905040718,3.32997005335432,8.83548186966649,8.77398719875488,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,2.82190430954022,3.50119364741774,1.35632511849868,0.623912584592421,0.356857977594324,0.788512075169673,1.17141414992713,0.601892199455438,0,0,1.32845119707087,1.47495334833363,1.12948698808508,0,0.686286847621712,0,0,0,0,0,0,0.248107807818777,1.38115775959256,0.280660094433074,0.896974044789907,0.511707249066704,0,0,1.23367755042124,0.887808626565635,3.20295908453856,3.11552657510173,1.62694529843943,0,0,0,0.574072240823034,0.546273504020151,0.131124414959424,0,0.231046011313244,0.784349769176855,0,0.633309773357254,0,0.170093705276516,0,0,0,0,0.254876273045038,0,1.11937377361089,0,0,0.256450125116389,0.328014645699706,0.325378394664303,0.103041011647722,0,0.247528499761764,0,0,0,2.80345083047154,0.616194468458578,0.921022048356777,0.275673144969061,3.22260734604821,1.45016693914229,1.19317278382541,0,0,0,0,0,0.929691098594572,2.20368642781448,0,0,1.06461206063404,0,0.74129687641568,0.286249773483982,1.116475108079,8.5422444674056,2.66882271493355,0,0.42793898803392,5.72765846266686,0,1.43897966066652,1.64722217841633,0.706874414074119,0.202182481573316,1.58510321173008,0,0,0.731140468893853,0,1.9109987597118,2.12108147930569,4.52032466480971,0,0,0.438450885253763,0,0,0.608731130888112,0.30982349809975,0,0.430234056612155,1.27723753317057,0,0.354761064070598,1.26664581178598,5.26871828735843,0.75894634753143,2.0996083214699,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0.846694330895531,0,0,1.14117339516596,0,0,0,0,0,0,0,0.307240764308458,0.447352215784832,0.500547425135725,0.19538809540204,0,0,0,0,0,0,0.586032717087576,0,0.222886768554957,0,0,0,0,0,0.140669416410513,2.22617410045812,0,0,0,0,0,0.715880777515084,0,0.311039587661807,0,0,0,0.295930216910801,0,2.22273980289274,0,0,0,0,0,0,0,0,0,0.689486746482929,0,0,0,0.120596438625408,0,0,0,0,0,0,0.615602068030377,6.03892895989106,0,0,0,0,0.0915975934018623,0.533034776018635,0,1.56980256395025,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.442287822516696,1.22206028986725,0,0,0,0.337005664903385,0,0,0,0,19.4224303627274,0.394584402849391,0,0,0.31593289814244,0,0,0,0,0,0,0,0.693373365065693,0,0,0,0.52418000472609,0,0,0,0,0.193978032976839,0.0882561266915003,0.225980740780532,0.685209623233754,1.78843150532691,0,0,0.561111741760736,0.213452994739353,0,0,0,0,0,0,0,1.22313785466253,2.30126261887133,2.44795722327172,3.75635766871975,0.600420288709789,0,0,10.314370594079,0,4.18923601908381,1.60412296808179,0.717873024576814,0,0,0,0.335917362433631,0.360299883542404,0,0,0,0,0.295282444544246,0,0,0.272406812223151,0,0,0,0,0,0.303747783290123,0,0.0788057072991982,0.262272940674991,0,17.5701592546188,0,0,0,0,0,0,0,1.19730191562487,0,17.2091902003276,0.566560457600628,0.146552233678082,0,0,0.13223260174269,0,0,0.106787412567695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| ||
|short_description=p11@PSD3 | |||
}} | }} |
Latest revision as of 06:52, 17 September 2015
Short description: | p11@PSD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_PSD3_5end |
Coexpression cluster: | C1542_Fibroblast_ductal_liposarcoma_large_normal_mesenchymal_Myoblast |
Association with transcript: | -39bp_to_ENST00000521475_5end |
EntrezGene: | PSD3 |
HGNC: | 19093 |
UniProt: | E5RIH3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 8.64e-23 | 76 |
skin fibroblast | 4.34e-21 | 23 |
multi fate stem cell | 1.31e-12 | 427 |
somatic stem cell | 4.59e-12 | 433 |
stem cell | 2.30e-11 | 441 |
connective tissue cell | 8.84e-10 | 361 |
fibroblast of gingiva | 8.91e-09 | 5 |
mesenchymal cell | 6.11e-08 | 354 |
motile cell | 1.50e-07 | 386 |
GAG secreting cell | 2.10e-07 | 9 |
carbohydrate secreting cell | 2.10e-07 | 9 |
skeletal muscle myoblast | 5.81e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 5.61e-09 | 5 |
myotonic disease | 5.61e-09 | 5 |
muscle tissue disease | 5.61e-09 | 5 |
myopathy | 5.61e-09 | 5 |
muscular disease | 5.61e-09 | 5 |
myotonic dystrophy | 5.61e-09 | 5 |