FFCP PHASE1:Hg19::chr14:73569774..73569903,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr14:73569774..73569903,+ | |||
|coexpression_cluster_id=C905 | |||
|description=CAGE_peak_at_chr14:73569774..73569903,+ | |||
|id=chr14:73569774..73569903,+ | |||
|ontology_enrichment_celltype=CL:0002032!7.16e-12!165;CL:0000837!7.16e-12!165;CL:0000037!9.47e-12!172;CL:0000566!9.47e-12!172;CL:0000988!1.35e-09!182;CL:0002087!1.17e-08!119;CL:0000763!8.18e-08!112;CL:0000049!8.18e-08!112;CL:0000738!1.45e-07!140;CL:0002031!3.07e-07!124 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002032,7.47e-11,161;CL:0000837,7.47e-11,161;CL:0000037,1.30e-10,168;CL:0000988,4.32e-09,177;CL:0002087,3.96e-08,115;CL:0000763,1.31e-07,108;CL:0000049,1.31e-07,108 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!3.87e-15!235;DOID:14566!2.94e-14!239;DOID:0050686!1.92e-10!137;DOID:2531!6.04e-09!51;DOID:0060083!6.04e-09!51;DOID:1240!3.68e-08!39;DOID:0050687!7.70e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,9.00e-14,235;DOID:14566,5.95e-13,239;DOID:0050686,2.38e-09,137;DOID:2531,6.00e-09,51;DOID:0060083,6.00e-09,51;DOID:1240,2.64e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0001049!5.23e-16!57;UBERON:0005068!5.23e-16!57;UBERON:0006241!5.23e-16!57;UBERON:0007135!5.23e-16!57;UBERON:0002780!3.55e-14!41;UBERON:0001890!3.55e-14!41;UBERON:0006240!3.55e-14!41;UBERON:0001017!4.96e-14!82;UBERON:0003080!8.57e-14!42;UBERON:0000073!4.21e-13!94;UBERON:0001016!4.21e-13!94;UBERON:0000955!5.55e-13!69;UBERON:0006238!5.55e-13!69;UBERON:0005743!1.49e-12!86;UBERON:0002616!5.55e-12!59;UBERON:0002020!1.06e-11!34;UBERON:0003528!1.06e-11!34;UBERON:0007023!2.38e-11!115;UBERON:0002346!3.49e-11!90;UBERON:0001893!5.23e-11!34;UBERON:0002791!7.67e-11!33;UBERON:0001869!2.41e-10!32;UBERON:0003075!7.94e-10!86;UBERON:0007284!7.94e-10!86;UBERON:0002619!6.01e-08!22;UBERON:0000956!1.33e-07!25;UBERON:0000203!1.33e-07!25;UBERON:0003056!2.35e-07!61;UBERON:0001950!8.48e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.50e-10;41!UBERON:0001890;1.50e-10;41!UBERON:0003528;8.29e-10;34!UBERON:0002020;8.29e-10;34!UBERON:0002791;1.30e-09;32!UBERON:0000073;1.68e-09;53!UBERON:0002616;1.68e-09;53!UBERON:0001869;3.11e-09;32!UBERON:0001893;4.41e-09;34!UBERON:0002619;1.99e-07;22!UBERON:0000956;3.73e-07;25!UBERON:0000203;3.73e-07;25!UBERON:0001016;9.36e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.43e-16,56;UBERON:0005068,1.43e-16,56;UBERON:0006241,1.43e-16,56;UBERON:0007135,1.43e-16,56;UBERON:0000073,2.94e-15,53;UBERON:0002616,2.94e-15,53;UBERON:0001016,1.55e-14,89;UBERON:0001017,3.90e-14,81;UBERON:0002780,6.99e-14,41;UBERON:0001890,6.99e-14,41;UBERON:0003080,6.99e-14,41;UBERON:0006240,6.99e-14,41;UBERON:0000955,5.61e-13,68;UBERON:0006238,5.61e-13,68;UBERON:0002346,7.46e-12,86;UBERON:0003528,2.55e-11,34;UBERON:0002020,2.55e-11,34;UBERON:0007023,4.64e-11,114;UBERON:0001893,1.26e-10,34;UBERON:0003075,2.08e-10,82;UBERON:0007284,2.08e-10,82;UBERON:0002791,3.03e-10,32;UBERON:0001869,6.12e-10,32;UBERON:0003056,3.34e-08,61;UBERON:0002619,1.99e-07,22;UBERON:0000956,3.93e-07,25;UBERON:0000203,3.93e-07,25 | |||
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| |||
|short_description=p@chr14:73569774..73569903,+ | |||
}} |
Latest revision as of 22:31, 24 July 2015
Short description: | p@chr14:73569774..73569903, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:73569774..73569903, + |
Coexpression cluster: | C905_cerebellum_occipital_anaplastic_middle_parietal_Neutrophils_olfactory |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic oligopotent progenitor cell | 7.47e-11 | 161 |
hematopoietic multipotent progenitor cell | 7.47e-11 | 161 |
hematopoietic stem cell | 1.30e-10 | 168 |
hematopoietic cell | 4.32e-09 | 177 |
nongranular leukocyte | 3.96e-08 | 115 |
myeloid cell | 1.31e-07 | 108 |
common myeloid progenitor | 1.31e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
neural tube | 1.43e-16 | 56 |
neural rod | 1.43e-16 | 56 |
future spinal cord | 1.43e-16 | 56 |
neural keel | 1.43e-16 | 56 |
regional part of nervous system | 2.94e-15 | 53 |
regional part of brain | 2.94e-15 | 53 |
nervous system | 1.55e-14 | 89 |
central nervous system | 3.90e-14 | 81 |
regional part of forebrain | 6.99e-14 | 41 |
forebrain | 6.99e-14 | 41 |
anterior neural tube | 6.99e-14 | 41 |
future forebrain | 6.99e-14 | 41 |
brain | 5.61e-13 | 68 |
future brain | 5.61e-13 | 68 |
neurectoderm | 7.46e-12 | 86 |
brain grey matter | 2.55e-11 | 34 |
gray matter | 2.55e-11 | 34 |
adult organism | 4.64e-11 | 114 |
telencephalon | 1.26e-10 | 34 |
neural plate | 2.08e-10 | 82 |
presumptive neural plate | 2.08e-10 | 82 |
regional part of telencephalon | 3.03e-10 | 32 |
cerebral hemisphere | 6.12e-10 | 32 |
pre-chordal neural plate | 3.34e-08 | 61 |
regional part of cerebral cortex | 1.99e-07 | 22 |
cerebral cortex | 3.93e-07 | 25 |
pallium | 3.93e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
cancer | 9.00e-14 | 235 |
disease of cellular proliferation | 5.95e-13 | 239 |
organ system cancer | 2.38e-09 | 137 |
hematologic cancer | 6.00e-09 | 51 |
immune system cancer | 6.00e-09 | 51 |
leukemia | 2.64e-08 | 39 |